RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
HDAC6-214ENST00000465269 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
HDAC6-214ENST00000465269 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
HDAC6-214ENST00000465269 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
HDAC6-214ENST00000465269 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
HDAC6-214ENST00000465269 FAM104AQ969W3 186 aa8.82□□□□□ -1
HDAC6-214ENST00000465269 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 NUPR1O60356 82 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
HDAC6-214ENST00000465269 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 CDIP1Q9H305 208 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 PYGO1Q9Y3Y4 419 aa8.81□□□□□ -1
HDAC6-214ENST00000465269 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
HDAC6-214ENST00000465269 A0A096LNJ9 63 aa8.8□□□□□ -1
HDAC6-214ENST00000465269 IGIPA6NJ69 53 aa8.8□□□□□ -1
HDAC6-214ENST00000465269 SERF1AO75920 110 aa8.8□□□□□ -1
HDAC6-214ENST00000465269 FAM19A2Q8N3H0 131 aa8.8□□□□□ -1
HDAC6-214ENST00000465269 LINC00959A0A1B0GUT2 108 aa8.79□□□□□ -1
HDAC6-214ENST00000465269 HSBP1O75506 76 aa8.79□□□□□ -1
HDAC6-214ENST00000465269 HBDP02042 147 aa8.79□□□□□ -1
HDAC6-214ENST00000465269 LINC00310P59036 64 aa8.79□□□□□ -1
HDAC6-214ENST00000465269 MRPS36P82909 103 aaKnown RBP8.79□□□□□ -1
HDAC6-214ENST00000465269 ERASQ7Z444 233 aa8.79□□□□□ -1
HDAC6-214ENST00000465269 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 APOMO95445 188 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 NDUFA6P56556 154 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
HDAC6-214ENST00000465269 SS18Q15532 418 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 TMEM141Q96I45 108 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 VCX2Q9H322 139 aa8.78□□□□□ -1
HDAC6-214ENST00000465269 Q6ZN92 141 aa8.77□□□□□ -1.01
HDAC6-214ENST00000465269 FAM19A5Q7Z5A7 132 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-214ENST00000465269 TIMM17AQ99595 171 aa8.77□□□□□ -1.01
HDAC6-214ENST00000465269 A0A087X002 238 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 LINC01549A6NIU2 74 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 IFITM10A6NMD0 228 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 PDZD11Q5EBL8 140 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
HDAC6-214ENST00000465269 LINC00173Q6ZV60 143 aa8.75□□□□□ -1.01
HDAC6-214ENST00000465269 AMELXQ99217 191 aa8.75□□□□□ -1.01
HDAC6-214ENST00000465269 NPSP0C0P6 89 aa8.74□□□□□ -1.01
HDAC6-214ENST00000465269 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
HDAC6-214ENST00000465269 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
HDAC6-214ENST00000465269 C2orf88Q9BSF0 95 aa8.74□□□□□ -1.01
HDAC6-214ENST00000465269 KRTAP4-1Q9BYQ7 146 aa8.74□□□□□ -1.01
HDAC6-214ENST00000465269 ATP5LO75964 103 aa8.73□□□□□ -1.01
HDAC6-214ENST00000465269 FABP4P15090 132 aa8.73□□□□□ -1.01
HDAC6-214ENST00000465269 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
HDAC6-214ENST00000465269 CST9LQ9H4G1 147 aa8.72□□□□□ -1.01
HDAC6-214ENST00000465269 LEPROTL1O95214 131 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 PMVKQ15126 192 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 C5orf38Q86SI9 138 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
HDAC6-214ENST00000465269 MALP21145 153 aa8.7□□□□□ -1.02
HDAC6-214ENST00000465269 UBE2BP63146 152 aa8.7□□□□□ -1.02
HDAC6-214ENST00000465269 COA6Q5JTJ3 125 aaKnown RBP8.7□□□□□ -1.02
HDAC6-214ENST00000465269 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
HDAC6-214ENST00000465269 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
HDAC6-214ENST00000465269 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
HDAC6-214ENST00000465269 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
HDAC6-214ENST00000465269 H0Y8G0 127 aa8.68□□□□□ -1.02
HDAC6-214ENST00000465269 COX7A2LO14548 114 aa8.68□□□□□ -1.02
HDAC6-214ENST00000465269 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
HDAC6-214ENST00000465269 IGHV3OR16-9A0A0B4J2B5 98 aa8.67□□□□□ -1.02
HDAC6-214ENST00000465269 M0QXV9 152 aa8.67□□□□□ -1.02
HDAC6-214ENST00000465269 S100A6P06703 90 aa8.67□□□□□ -1.02
HDAC6-214ENST00000465269 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
HDAC6-214ENST00000465269 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
HDAC6-214ENST00000465269 CRYGAP11844 174 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 C2orf48Q96LS8 159 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
HDAC6-214ENST00000465269 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
HDAC6-214ENST00000465269 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
HDAC6-214ENST00000465269 ZNF861PO60384 105 aa8.65□□□□□ -1.02
HDAC6-214ENST00000465269 HERVK_113P63121 156 aa8.65□□□□□ -1.02
HDAC6-214ENST00000465269 SEC11AP67812 179 aa8.65□□□□□ -1.02
HDAC6-214ENST00000465269 SNRPEP62304 92 aaKnown RBP8.64□□□□□ -1.03
HDAC6-214ENST00000465269 RNF151Q2KHN1 245 aa8.64□□□□□ -1.03
HDAC6-214ENST00000465269 MAP1LC3CQ9BXW4 147 aa8.64□□□□□ -1.03
HDAC6-214ENST00000465269 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
HDAC6-214ENST00000465269 TRAV12-1A0A0B4J245 112 aa8.63□□□□□ -1.03
HDAC6-214ENST00000465269 KRTAP13-2Q52LG2 175 aa8.63□□□□□ -1.03
HDAC6-214ENST00000465269 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
HDAC6-214ENST00000465269 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
HDAC6-214ENST00000465269 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
HDAC6-214ENST00000465269 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
HDAC6-214ENST00000465269 S100A2P29034 98 aa8.62□□□□□ -1.03
HDAC6-214ENST00000465269 HIST3H2BBQ8N257 126 aa8.62□□□□□ -1.03
HDAC6-214ENST00000465269 ORAOV1Q8WV07 137 aa8.62□□□□□ -1.03
HDAC6-214ENST00000465269 F8VRH5 84 aa8.61□□□□□ -1.03
HDAC6-214ENST00000465269 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
HDAC6-214ENST00000465269 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
HDAC6-214ENST00000465269 PACRGQ96M98 296 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms