RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
TOP3A-202ENST00000461127 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
TOP3A-202ENST00000461127 STPG4Q8N801 248 aa10.74□□□□□ -0.69
TOP3A-202ENST00000461127 CST9LQ9H4G1 147 aa10.74□□□□□ -0.69
TOP3A-202ENST00000461127 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
TOP3A-202ENST00000461127 PET117Q6UWS5 81 aa10.73□□□□□ -0.69
TOP3A-202ENST00000461127 FAM104AQ969W3 186 aa10.73□□□□□ -0.69
TOP3A-202ENST00000461127 AMELXQ99217 191 aa10.73□□□□□ -0.69
TOP3A-202ENST00000461127 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
TOP3A-202ENST00000461127 C20orf202A1L168 122 aa10.72□□□□□ -0.69
TOP3A-202ENST00000461127 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
TOP3A-202ENST00000461127 AKR1D1P51857 326 aa10.71□□□□□ -0.69
TOP3A-202ENST00000461127 CFAP161Q6P656 301 aa10.71□□□□□ -0.69
TOP3A-202ENST00000461127 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
TOP3A-202ENST00000461127 KRTAP9-6A0A140TA67 174 aa10.69□□□□□ -0.7
TOP3A-202ENST00000461127 SRSF9Q13242 221 aaKnown RBP eCLIP10.69□□□□□ -0.7
TOP3A-202ENST00000461127 SS18Q15532 418 aa10.69□□□□□ -0.7
TOP3A-202ENST00000461127 Q6ZRP5 223 aa10.69□□□□□ -0.7
TOP3A-202ENST00000461127 LINC00959A0A1B0GUT2 108 aa10.68□□□□□ -0.7
TOP3A-202ENST00000461127 SCGB1D1O95968 90 aa10.68□□□□□ -0.7
TOP3A-202ENST00000461127 UBE2D1P51668 147 aa10.68□□□□□ -0.7
TOP3A-202ENST00000461127 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
TOP3A-202ENST00000461127 F8VRH5 84 aa10.67□□□□□ -0.7
TOP3A-202ENST00000461127 CCL25O15444 150 aa10.67□□□□□ -0.7
TOP3A-202ENST00000461127 SEC11AP67812 179 aa10.67□□□□□ -0.7
TOP3A-202ENST00000461127 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
TOP3A-202ENST00000461127 PMCHL2Q9BQD1 86 aa10.67□□□□□ -0.7
TOP3A-202ENST00000461127 GEMIN7Q9H840 131 aaKnown RBP10.67□□□□□ -0.7
TOP3A-202ENST00000461127 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
TOP3A-202ENST00000461127 DPM2O94777 84 aa10.66□□□□□ -0.7
TOP3A-202ENST00000461127 PKIGQ9Y2B9 76 aa10.66□□□□□ -0.7
TOP3A-202ENST00000461127 LOC105371267A0A1B0GV96 52 aa10.65□□□□□ -0.7
TOP3A-202ENST00000461127 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
TOP3A-202ENST00000461127 PLNP26678 52 aa10.65□□□□□ -0.7
TOP3A-202ENST00000461127 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
TOP3A-202ENST00000461127 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 TINCRA0A1B0GVN0 87 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 IGKCP01834 107 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 XCL1P47992 114 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 HERVK_113P63121 156 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 LINC00242Q5T6M2 205 aa10.64□□□□□ -0.71
TOP3A-202ENST00000461127 CHCHD10Q8WYQ3 142 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-202ENST00000461127 A0A096LNI7 61 aa10.63□□□□□ -0.71
TOP3A-202ENST00000461127 HIGD2BQ4VC39 106 aa10.63□□□□□ -0.71
TOP3A-202ENST00000461127 FAM19A3Q7Z5A8 133 aa10.63□□□□□ -0.71
TOP3A-202ENST00000461127 MUC2Q02817 5179 aa10.62□□□□□ -0.71
TOP3A-202ENST00000461127 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
TOP3A-202ENST00000461127 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-202ENST00000461127 LINC00469Q8N7U9 141 aa10.62□□□□□ -0.71
TOP3A-202ENST00000461127 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
TOP3A-202ENST00000461127 TMEM170BQ5T4T1 132 aa10.61□□□□□ -0.71
TOP3A-202ENST00000461127 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
TOP3A-202ENST00000461127 PSORS1C2Q9UIG4 136 aa10.61□□□□□ -0.71
TOP3A-202ENST00000461127 H3BRM9 83 aa10.6□□□□□ -0.71
TOP3A-202ENST00000461127 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
TOP3A-202ENST00000461127 ZNF22P17026 224 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-202ENST00000461127 GVQW2A0A096LPI5 108 aaPredicted RBP10.58□□□□□ -0.72
TOP3A-202ENST00000461127 COX7A2LO14548 114 aa10.58□□□□□ -0.72
TOP3A-202ENST00000461127 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
TOP3A-202ENST00000461127 C5orf38Q86SI9 138 aa10.58□□□□□ -0.72
TOP3A-202ENST00000461127 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
TOP3A-202ENST00000461127 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 HSBP1L1C9JCN9 74 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 MALP21145 153 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 HERVK_113P61574 105 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 FOXI1Q12951 378 aa10.57□□□□□ -0.72
TOP3A-202ENST00000461127 A0A087WZ39 114 aa10.55□□□□□ -0.72
TOP3A-202ENST00000461127 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
TOP3A-202ENST00000461127 SMIM6P0DI80 62 aa10.54□□□□□ -0.72
TOP3A-202ENST00000461127 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
TOP3A-202ENST00000461127 APOMO95445 188 aa10.53□□□□□ -0.72
TOP3A-202ENST00000461127 PRR4Q16378 134 aa10.53□□□□□ -0.72
TOP3A-202ENST00000461127 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
TOP3A-202ENST00000461127 VAMP8Q9BV40 100 aa10.53□□□□□ -0.72
TOP3A-202ENST00000461127 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
TOP3A-202ENST00000461127 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
TOP3A-202ENST00000461127 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
TOP3A-202ENST00000461127 S100A12P80511 92 aa10.51□□□□□ -0.73
TOP3A-202ENST00000461127 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
TOP3A-202ENST00000461127 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
TOP3A-202ENST00000461127 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
TOP3A-202ENST00000461127 DIRC1Q969H9 104 aa10.49□□□□□ -0.73
TOP3A-202ENST00000461127 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
TOP3A-202ENST00000461127 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
TOP3A-202ENST00000461127 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
TOP3A-202ENST00000461127 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 E9PLD3 99 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 LEPROTO15243 131 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 PRSS2P07478 247 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
TOP3A-202ENST00000461127 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
TOP3A-202ENST00000461127 NMUP48645 174 aa10.47□□□□□ -0.73
TOP3A-202ENST00000461127 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
TOP3A-202ENST00000461127 C1orf137Q5JT78 98 aa10.47□□□□□ -0.73
TOP3A-202ENST00000461127 COX7B2Q8TF08 81 aa10.47□□□□□ -0.73
TOP3A-202ENST00000461127 LINC00526Q96FQ7 95 aa10.47□□□□□ -0.73
TOP3A-202ENST00000461127 FAT4Q6V0I7 4981 aa10.46□□□□□ -0.73
TOP3A-202ENST00000461127 ZNF561-AS1K7EIQ3 104 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms