RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SLPIP03973 132 aa10.95□□□□□ -0.66
SSR4-206ENST00000460616 CCL18P55774 89 aa10.95□□□□□ -0.66
SSR4-206ENST00000460616 FN1P02751 2386 aaKnown RBP10.95□□□□□ -0.66
SSR4-206ENST00000460616 TRGV1A0A0A0MS02 117 aa10.94□□□□□ -0.66
SSR4-206ENST00000460616 UBE2L6O14933 153 aa10.94□□□□□ -0.66
SSR4-206ENST00000460616 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
SSR4-206ENST00000460616 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
SSR4-206ENST00000460616 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 K7EQD1 137 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 INAFM1C9JVW0 142 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 CCKP06307 115 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 SLURP1P55000 103 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
SSR4-206ENST00000460616 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
SSR4-206ENST00000460616 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
SSR4-206ENST00000460616 PAX4O43316 350 aa10.92□□□□□ -0.66
SSR4-206ENST00000460616 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
SSR4-206ENST00000460616 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
SSR4-206ENST00000460616 FHL2Q14192 279 aa10.91□□□□□ -0.66
SSR4-206ENST00000460616 DEFB136Q30KP8 78 aa10.91□□□□□ -0.66
SSR4-206ENST00000460616 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
SSR4-206ENST00000460616 PFN2P35080 140 aa10.9□□□□□ -0.66
SSR4-206ENST00000460616 HILS1P60008 231 aa10.9□□□□□ -0.66
SSR4-206ENST00000460616 Q6YL49 198 aa10.9□□□□□ -0.66
SSR4-206ENST00000460616 NF1P21359 2839 aa10.9□□□□□ -0.66
SSR4-206ENST00000460616 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.67
SSR4-206ENST00000460616 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
SSR4-206ENST00000460616 IBA57-AS1B1ANH7 110 aa10.89□□□□□ -0.67
SSR4-206ENST00000460616 SS18Q15532 418 aa10.89□□□□□ -0.67
SSR4-206ENST00000460616 GHRHP01286 108 aa10.89□□□□□ -0.67
SSR4-206ENST00000460616 Q5XG85 94 aa10.89□□□□□ -0.67
SSR4-206ENST00000460616 HRCT1Q6UXD1 115 aa10.88□□□□□ -0.67
SSR4-206ENST00000460616 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
SSR4-206ENST00000460616 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
SSR4-206ENST00000460616 Q6ZTI0 123 aa10.87□□□□□ -0.67
SSR4-206ENST00000460616 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
SSR4-206ENST00000460616 ESM1Q9NQ30 184 aa10.87□□□□□ -0.67
SSR4-206ENST00000460616 NDUFC2O95298 119 aa10.86□□□□□ -0.67
SSR4-206ENST00000460616 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SSR4-206ENST00000460616 IL17DQ8TAD2 202 aa10.86□□□□□ -0.67
SSR4-206ENST00000460616 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 JMJD7-PLA2G4BH0Y9G9 81 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 C1orf158Q8N1D5 194 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 DNAJC9-AS1A6NH13 148 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 DYNLRB2Q8TF09 96 aa10.85□□□□□ -0.67
SSR4-206ENST00000460616 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
SSR4-206ENST00000460616 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
SSR4-206ENST00000460616 IGHV3OR16-9A0A0B4J2B5 98 aa10.84□□□□□ -0.67
SSR4-206ENST00000460616 NIPBLQ6KC79 2804 aaeCLIP10.83□□□□□ -0.67
SSR4-206ENST00000460616 C20orf197Q8N268 126 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 ZNF702PQ9H963 129 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 A0A087WZ39 114 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 TMEM256-PLSCR3K7ERE1 68 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 DEFB114Q30KQ6 69 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 LYPD5Q6UWN5 251 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 STHQ8IWL8 128 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
SSR4-206ENST00000460616 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
SSR4-206ENST00000460616 Q8N814 137 aa10.81□□□□□ -0.68
SSR4-206ENST00000460616 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
SSR4-206ENST00000460616 C6orf226Q5I0X4 101 aa10.81□□□□□ -0.68
SSR4-206ENST00000460616 UBL5Q9BZL1 73 aa10.8□□□□□ -0.68
SSR4-206ENST00000460616 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SSR4-206ENST00000460616 TRBV10-3A0A0K0K1G6 114 aa10.79□□□□□ -0.68
SSR4-206ENST00000460616 XCL1P47992 114 aa10.79□□□□□ -0.68
SSR4-206ENST00000460616 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
SSR4-206ENST00000460616 SETD2Q9BYW2 2564 aaPredicted RBP10.79□□□□□ -0.68
SSR4-206ENST00000460616 TMEM86BQ8N661 226 aa10.79□□□□□ -0.68
SSR4-206ENST00000460616 JMJD1CQ15652 2540 aa10.78□□□□□ -0.68
SSR4-206ENST00000460616 ODF3L2Q3SX64 289 aa10.78□□□□□ -0.68
SSR4-206ENST00000460616 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
SSR4-206ENST00000460616 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
SSR4-206ENST00000460616 KHDC1LQ5JSQ8 128 aa10.77□□□□□ -0.69
SSR4-206ENST00000460616 TRGV2A0A075B6R0 118 aa10.77□□□□□ -0.69
SSR4-206ENST00000460616 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
SSR4-206ENST00000460616 C2CD3Q4AC94 2353 aa10.76□□□□□ -0.69
SSR4-206ENST00000460616 RNASE1P07998 156 aaKnown RBP10.76□□□□□ -0.69
SSR4-206ENST00000460616 NANOS2P60321 138 aaKnown RBP10.76□□□□□ -0.69
SSR4-206ENST00000460616 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
SSR4-206ENST00000460616 LINC00959A0A1B0GUT2 108 aa10.74□□□□□ -0.69
SSR4-206ENST00000460616 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
SSR4-206ENST00000460616 TRGV4A0A0C4DH28 118 aa10.73□□□□□ -0.69
SSR4-206ENST00000460616 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
SSR4-206ENST00000460616 H7BZZ5 65 aa10.73□□□□□ -0.69
SSR4-206ENST00000460616 SERP1Q9Y6X1 66 aa10.73□□□□□ -0.69
SSR4-206ENST00000460616 TRAV7A0A075B6U4 112 aa10.72□□□□□ -0.69
SSR4-206ENST00000460616 EPM2AB3EWF7 344 aa10.71□□□□□ -0.69
SSR4-206ENST00000460616 BCE1O60756 84 aa10.71□□□□□ -0.69
SSR4-206ENST00000460616 RBM3P98179 157 aaKnown RBP10.69□□□□□ -0.7
SSR4-206ENST00000460616 Q8IZM0 81 aa10.69□□□□□ -0.7
SSR4-206ENST00000460616 PLAC8L1A1L4L8 177 aa10.69□□□□□ -0.7
SSR4-206ENST00000460616 Q6ZQT0 140 aa10.68□□□□□ -0.7
SSR4-206ENST00000460616 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
SSR4-206ENST00000460616 C16orf74Q96GX8 76 aa10.68□□□□□ -0.7
SSR4-206ENST00000460616 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
SSR4-206ENST00000460616 LINC01547P58512 204 aaPredicted RBP10.67□□□□□ -0.7
SSR4-206ENST00000460616 HAMPP81172 84 aa10.67□□□□□ -0.7
SSR4-206ENST00000460616 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
SSR4-206ENST00000460616 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 377.6 ms