RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 LINC00158P58513 81 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
LMNB1-203ENST00000460265 DNAL4O96015 105 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 GYPEP15421 78 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 HIVEP1P15822 2718 aa10.98□□□□□ -0.65
LMNB1-203ENST00000460265 MRPS36P82909 103 aaKnown RBP10.97□□□□□ -0.65
LMNB1-203ENST00000460265 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
LMNB1-203ENST00000460265 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
LMNB1-203ENST00000460265 SERP2Q8N6R1 65 aa10.97□□□□□ -0.65
LMNB1-203ENST00000460265 COX7A2LO14548 114 aa10.96□□□□□ -0.66
LMNB1-203ENST00000460265 XCL1P47992 114 aa10.96□□□□□ -0.66
LMNB1-203ENST00000460265 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.66
LMNB1-203ENST00000460265 A0A087WVE0 104 aa10.96□□□□□ -0.66
LMNB1-203ENST00000460265 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
LMNB1-203ENST00000460265 TRBV10-1A0A0K0K1A3 114 aa10.95□□□□□ -0.66
LMNB1-203ENST00000460265 VWFP04275 2813 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
LMNB1-203ENST00000460265 OXTP01178 125 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 HIST1H4AP62805 103 aaKnown RBP10.94□□□□□ -0.66
LMNB1-203ENST00000460265 C6orf226Q5I0X4 101 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 LINC00242Q5T6M2 205 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 Q9HAA7 133 aa10.94□□□□□ -0.66
LMNB1-203ENST00000460265 OTOGQ6ZRI0 2925 aa10.92□□□□□ -0.66
LMNB1-203ENST00000460265 PAX4O43316 350 aa10.92□□□□□ -0.66
LMNB1-203ENST00000460265 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
LMNB1-203ENST00000460265 DAD1P61803 113 aa10.91□□□□□ -0.66
LMNB1-203ENST00000460265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.91□□□□□ -0.66
LMNB1-203ENST00000460265 NBEAL1Q6ZS30 2694 aa10.91□□□□□ -0.66
LMNB1-203ENST00000460265 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
LMNB1-203ENST00000460265 COL6A5A8TX70 2615 aa10.9□□□□□ -0.66
LMNB1-203ENST00000460265 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.66
LMNB1-203ENST00000460265 C16orf95Q9H693 158 aa10.9□□□□□ -0.66
LMNB1-203ENST00000460265 PDZD2O15018 2839 aa10.9□□□□□ -0.67
LMNB1-203ENST00000460265 GIG44P09565 113 aaPredicted RBP10.89□□□□□ -0.67
LMNB1-203ENST00000460265 Q5XG85 94 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 CDC42SE2Q9NRR3 84 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 TENM1Q9UKZ4 2725 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 A8MTW9 85 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 IGLV4-60A0A075B6I1 120 aa10.89□□□□□ -0.67
LMNB1-203ENST00000460265 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
LMNB1-203ENST00000460265 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
LMNB1-203ENST00000460265 MALP21145 153 aa10.88□□□□□ -0.67
LMNB1-203ENST00000460265 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
LMNB1-203ENST00000460265 LINC00308Q8TCZ7 52 aa10.88□□□□□ -0.67
LMNB1-203ENST00000460265 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
LMNB1-203ENST00000460265 SPATA3Q8NHX4 192 aa10.87□□□□□ -0.67
LMNB1-203ENST00000460265 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
LMNB1-203ENST00000460265 KRTAP10-3P60369 221 aa10.86□□□□□ -0.67
LMNB1-203ENST00000460265 FHL2Q14192 279 aa10.86□□□□□ -0.67
LMNB1-203ENST00000460265 SS18Q15532 418 aa10.85□□□□□ -0.67
LMNB1-203ENST00000460265 MIR7-3HGQ8N6C7 128 aa10.85□□□□□ -0.67
LMNB1-203ENST00000460265 SMIM1B2RUZ4 78 aa10.84□□□□□ -0.67
LMNB1-203ENST00000460265 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
LMNB1-203ENST00000460265 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
LMNB1-203ENST00000460265 COX7B2Q8TF08 81 aa10.83□□□□□ -0.67
LMNB1-203ENST00000460265 LINC00846Q9NV44 126 aa10.83□□□□□ -0.67
LMNB1-203ENST00000460265 PRO0255Q9UI72 69 aa10.83□□□□□ -0.67
LMNB1-203ENST00000460265 C20orf197Q8N268 126 aa10.83□□□□□ -0.68
LMNB1-203ENST00000460265 UPK3BQ9BT76 320 aa10.83□□□□□ -0.68
LMNB1-203ENST00000460265 C19orf73Q9NVV2 129 aa10.83□□□□□ -0.68
LMNB1-203ENST00000460265 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
LMNB1-203ENST00000460265 NDUFA1O15239 70 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 PRO0628Q9UI54 55 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 TIMM17BO60830 172 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 GHRHP01286 108 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 CRPP02741 224 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 APOC4P55056 127 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 Q6JHZ5 121 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
LMNB1-203ENST00000460265 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
LMNB1-203ENST00000460265 LINC00269Q8N2A0 174 aa10.81□□□□□ -0.68
LMNB1-203ENST00000460265 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
LMNB1-203ENST00000460265 OXLD1Q5BKU9 147 aa10.81□□□□□ -0.68
LMNB1-203ENST00000460265 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
LMNB1-203ENST00000460265 PLAC8L1A1L4L8 177 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 CSNK1G2-AS1Q8NCQ2 148 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 WFDC9Q8NEX5 89 aa10.79□□□□□ -0.68
LMNB1-203ENST00000460265 NDUFC2O95298 119 aa10.78□□□□□ -0.68
LMNB1-203ENST00000460265 C22orf24Q9Y442 160 aa10.78□□□□□ -0.68
LMNB1-203ENST00000460265 SOSTDC1Q6X4U4 206 aa10.77□□□□□ -0.68
LMNB1-203ENST00000460265 OVOL2Q9BRP0 275 aa10.77□□□□□ -0.68
LMNB1-203ENST00000460265 NCR3O14931 201 aa10.76□□□□□ -0.69
LMNB1-203ENST00000460265 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
LMNB1-203ENST00000460265 Q8N3U1 123 aa10.76□□□□□ -0.69
LMNB1-203ENST00000460265 KLK12Q9UKR0 248 aa10.75□□□□□ -0.69
LMNB1-203ENST00000460265 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
LMNB1-203ENST00000460265 SPART-AS1P0CW21 52 aa10.75□□□□□ -0.69
LMNB1-203ENST00000460265 A0A0U1RQV1 116 aa10.73□□□□□ -0.69
LMNB1-203ENST00000460265 IL17DQ8TAD2 202 aa10.73□□□□□ -0.69
LMNB1-203ENST00000460265 X6R8D5 127 aa10.73□□□□□ -0.69
LMNB1-203ENST00000460265 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms