RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 NPC2P61916 151 aa16.54■□□□□ 0.24
MCF2L-219ENST00000453297 KIAA0087Q14695 138 aa16.54■□□□□ 0.24
MCF2L-219ENST00000453297 SFTA2Q6UW10 78 aa16.54■□□□□ 0.24
MCF2L-219ENST00000453297 DNHD1Q96M86 4753 aa16.53■□□□□ 0.24
MCF2L-219ENST00000453297 VAMP3Q15836 100 aa16.53■□□□□ 0.24
MCF2L-219ENST00000453297 STAB2Q8WWQ8 2551 aa16.52■□□□□ 0.23
MCF2L-219ENST00000453297 EIF4EBP3O60516 100 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-219ENST00000453297 KLK5Q9Y337 293 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-219ENST00000453297 KRTAP26-1Q6PEX3 210 aa16.5■□□□□ 0.23
MCF2L-219ENST00000453297 LINC00308Q8TCZ7 52 aa16.5■□□□□ 0.23
MCF2L-219ENST00000453297 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-219ENST00000453297 CFAP161Q6P656 301 aa16.49■□□□□ 0.23
MCF2L-219ENST00000453297 C2orf82Q6UX34 121 aa16.49■□□□□ 0.23
MCF2L-219ENST00000453297 A0A1W2PPM0 123 aa16.49■□□□□ 0.23
MCF2L-219ENST00000453297 IBA57-AS1B1ANH7 110 aa16.48■□□□□ 0.23
MCF2L-219ENST00000453297 CKS1BP61024 79 aa16.48■□□□□ 0.23
MCF2L-219ENST00000453297 UPK3BQ9BT76 320 aa16.47■□□□□ 0.23
MCF2L-219ENST00000453297 A0A0B4J2C4 111 aa16.47■□□□□ 0.23
MCF2L-219ENST00000453297 CXCL5P42830 114 aa16.47■□□□□ 0.23
MCF2L-219ENST00000453297 PGPEP1Q9NXJ5 209 aa16.47■□□□□ 0.23
MCF2L-219ENST00000453297 PRO1854Q9UHT4 67 aa16.47■□□□□ 0.23
MCF2L-219ENST00000453297 SOSTDC1Q6X4U4 206 aa16.46■□□□□ 0.23
MCF2L-219ENST00000453297 LINC00158P58513 81 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 COPS9Q8WXC6 57 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 ERG28Q9UKR5 140 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 APLNQ9ULZ1 77 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 SPAG11BQ08648 103 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 UBE2V1Q13404 147 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 MIR7-3HGQ8N6C7 128 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 C1orf43Q9BWL3 253 aa16.45■□□□□ 0.22
MCF2L-219ENST00000453297 TSPAN13O95857 204 aa16.43■□□□□ 0.22
MCF2L-219ENST00000453297 PFN2P35080 140 aa16.43■□□□□ 0.22
MCF2L-219ENST00000453297 FABP2P12104 132 aa16.42■□□□□ 0.22
MCF2L-219ENST00000453297 PPDPFQ9H3Y8 114 aa16.42■□□□□ 0.22
MCF2L-219ENST00000453297 MEGF8Q7Z7M0 2845 aa16.41■□□□□ 0.22
MCF2L-219ENST00000453297 IGKV2D-24A0A075B6R9 120 aa16.41■□□□□ 0.22
MCF2L-219ENST00000453297 C6orf223Q8N319 242 aa16.41■□□□□ 0.22
MCF2L-219ENST00000453297 PRKDCP78527 4128 aaKnown RBP16.41■□□□□ 0.22
MCF2L-219ENST00000453297 DYNC2H1Q8NCM8 4307 aaKnown RBP16.4■□□□□ 0.22
MCF2L-219ENST00000453297 Q9HAA7 133 aa16.4■□□□□ 0.22
MCF2L-219ENST00000453297 GAGE10A6NGK3 116 aa16.39■□□□□ 0.21
MCF2L-219ENST00000453297 LINC00526Q96FQ7 95 aa16.39■□□□□ 0.21
MCF2L-219ENST00000453297 K7EP34 96 aa16.38■□□□□ 0.21
MCF2L-219ENST00000453297 SPCS1Q9Y6A9 102 aa16.38■□□□□ 0.21
MCF2L-219ENST00000453297 NUPR2A6NF83 97 aa16.37■□□□□ 0.21
MCF2L-219ENST00000453297 UNQ6190/PRO20217Q6UXQ8 127 aa16.36■□□□□ 0.21
MCF2L-219ENST00000453297 C10orf25Q5T742 122 aa16.35■□□□□ 0.21
MCF2L-219ENST00000453297 GTF2H5Q6ZYL4 71 aa16.35■□□□□ 0.21
MCF2L-219ENST00000453297 NTN5Q8WTR8 489 aaPredicted RBP16.35■□□□□ 0.21
MCF2L-219ENST00000453297 COX17Q14061 63 aa16.35■□□□□ 0.21
MCF2L-219ENST00000453297 C15orf56Q8N910 161 aa16.34■□□□□ 0.21
MCF2L-219ENST00000453297 H7C2G1 150 aa16.33■□□□□ 0.21
MCF2L-219ENST00000453297 C9orf116Q5BN46 136 aaPredicted RBP16.33■□□□□ 0.21
MCF2L-219ENST00000453297 UBE2DNLQ8IWF7 75 aa16.33■□□□□ 0.2
MCF2L-219ENST00000453297 HIGD2BQ4VC39 106 aa16.32■□□□□ 0.2
MCF2L-219ENST00000453297 ZNF561-AS1K7EIQ3 104 aa16.31■□□□□ 0.2
MCF2L-219ENST00000453297 LOC107984156A0A0G2JMH3 177 aa16.31■□□□□ 0.2
MCF2L-219ENST00000453297 ARL17AQ8IVW1 177 aa16.31■□□□□ 0.2
MCF2L-219ENST00000453297 SND1-IT1Q9HBX3 110 aa16.31■□□□□ 0.2
MCF2L-219ENST00000453297 Q1RN00 199 aa16.29■□□□□ 0.2
MCF2L-219ENST00000453297 GVQW2A0A096LPI5 108 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-219ENST00000453297 RPL13AP40429 203 aaKnown RBP16.29■□□□□ 0.2
MCF2L-219ENST00000453297 RMI2Q96E14 147 aa16.29■□□□□ 0.2
MCF2L-219ENST00000453297 CSMD3Q7Z407 3707 aa16.27■□□□□ 0.19
MCF2L-219ENST00000453297 PSMB2P49721 201 aa16.26■□□□□ 0.19
MCF2L-219ENST00000453297 C6orf48Q9UBA6 75 aa16.26■□□□□ 0.19
MCF2L-219ENST00000453297 DNAH1Q9P2D7 4330 aa16.26■□□□□ 0.19
MCF2L-219ENST00000453297 C2orf48Q96LS8 159 aa16.26■□□□□ 0.19
MCF2L-219ENST00000453297 CAMK2N2Q96S95 79 aa16.26■□□□□ 0.19
MCF2L-219ENST00000453297 LYRM7Q5U5X0 104 aa16.25■□□□□ 0.19
MCF2L-219ENST00000453297 IGKV2-28A0A075B6P5 120 aa16.24■□□□□ 0.19
MCF2L-219ENST00000453297 IGKV2D-28P01615 120 aa16.24■□□□□ 0.19
MCF2L-219ENST00000453297 KRTAP1-5Q9BYS1 174 aa16.24■□□□□ 0.19
MCF2L-219ENST00000453297 DNAH7Q8WXX0 4024 aa16.23■□□□□ 0.19
MCF2L-219ENST00000453297 TRBV30A0A0K0K1B3 111 aa16.23■□□□□ 0.19
MCF2L-219ENST00000453297 CASC10Q5T4H9 136 aa16.23■□□□□ 0.19
MCF2L-219ENST00000453297 MUC7Q8TAX7 377 aa16.23■□□□□ 0.19
MCF2L-219ENST00000453297 SCGB1C2P0DMR2 95 aa16.22■□□□□ 0.19
MCF2L-219ENST00000453297 Q6ZRU5 148 aa16.22■□□□□ 0.19
MCF2L-219ENST00000453297 F8WDY8 70 aa16.21■□□□□ 0.19
MCF2L-219ENST00000453297 TRIAP1O43715 76 aa16.21■□□□□ 0.19
MCF2L-219ENST00000453297 LINC00337Q8N6G1 96 aa16.21■□□□□ 0.19
MCF2L-219ENST00000453297 TRAV13-2A0A0B4J235 113 aa16.2■□□□□ 0.18
MCF2L-219ENST00000453297 H3BMG7 143 aa16.19■□□□□ 0.18
MCF2L-219ENST00000453297 TCL1BO95988 128 aa16.18■□□□□ 0.18
MCF2L-219ENST00000453297 USP17L23D6RBM5 183 aa16.17■□□□□ 0.18
MCF2L-219ENST00000453297 LYSTQ99698 3801 aa16.17■□□□□ 0.18
MCF2L-219ENST00000453297 TRBV20-1A0A075B6N2 111 aa16.17■□□□□ 0.18
MCF2L-219ENST00000453297 NDUFC2O95298 119 aa16.16■□□□□ 0.18
MCF2L-219ENST00000453297 PLECQ15149 4684 aaKnown RBP16.16■□□□□ 0.18
MCF2L-219ENST00000453297 SYCNQ0VAF6 134 aa16.15■□□□□ 0.18
MCF2L-219ENST00000453297 COX6CP09669 75 aa16.13■□□□□ 0.17
MCF2L-219ENST00000453297 PRR3P79522 188 aaKnown RBP16.12■□□□□ 0.17
MCF2L-219ENST00000453297 Q8NDZ9 215 aa16.12■□□□□ 0.17
MCF2L-219ENST00000453297 NBDYA0A0U1RRE5 68 aa16.1■□□□□ 0.17
MCF2L-219ENST00000453297 LECT2O14960 151 aa16.1■□□□□ 0.17
MCF2L-219ENST00000453297 STARD9Q9P2P6 4700 aa16.09■□□□□ 0.17
MCF2L-219ENST00000453297 FBN3Q75N90 2809 aa16.09■□□□□ 0.17
MCF2L-219ENST00000453297 SLPIP03973 132 aa16.09■□□□□ 0.17
MCF2L-219ENST00000453297 OR13C6PQ8NH95 151 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms