RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 XAGE1AQ9HD64 81 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 AMELXQ99217 191 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 ALKBH7Q9BT30 221 aaPredicted RBP8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 K7EMI3 77 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 HERVK_113P63121 156 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 ADIRFQ15847 76 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00469Q8N7U9 141 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 VCX2Q9H322 139 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 IGLV5-37A0A075B6J1 123 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 UBE2AP49459 152 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 G0S2P27469 103 aa8.27□□□□□ -1.09
LYSMD3-202ENST00000453259 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-202ENST00000453259 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
LYSMD3-202ENST00000453259 IGIPA6NJ69 53 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 RPL37AP8A6NKH3 93 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 Q8N8P6 123 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 ANAPC11Q9NYG5 84 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 PNRC1Q12796 327 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PEA15Q15121 130 aa8.22□□□□□ -1.09
LYSMD3-202ENST00000453259 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
LYSMD3-202ENST00000453259 LOC389332A0A1B0GUA5 103 aa8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 GNB1LQ9BYB4 327 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
LYSMD3-202ENST00000453259 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 C9JQL5 133 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 ERASQ7Z444 233 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 ATP5LO75964 103 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 PRLHP81277 87 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 FAM19A1Q7Z5A9 133 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-202ENST00000453259 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-202ENST00000453259 RAB5BP61020 215 aa8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 H3BRM9 83 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 COX17Q14061 63 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 ANAPC16Q96DE5 110 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 CRCT1Q9UGL9 99 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 M0R378 163 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 VPREB1P12018 145 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 SPINK1P00995 79 aa8.1□□□□□ -1.11
LYSMD3-202ENST00000453259 MT-ND4LP03901 98 aa8.1□□□□□ -1.11
LYSMD3-202ENST00000453259 A0A1B0GVG6 124 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 SND1-IT1Q9HBX3 110 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms