RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 SFTA2Q6UW10 78 aa12.01□□□□□ -0.49
LMNA-208ENST00000448611 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
LMNA-208ENST00000448611 HUWE1Q7Z6Z7 4374 aaKnown RBP12.01□□□□□ -0.49
LMNA-208ENST00000448611 TRAV10A0A0B4J240 114 aa12□□□□□ -0.49
LMNA-208ENST00000448611 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
LMNA-208ENST00000448611 COPS9Q8WXC6 57 aa11.99□□□□□ -0.49
LMNA-208ENST00000448611 PPDPFQ9H3Y8 114 aa11.99□□□□□ -0.49
LMNA-208ENST00000448611 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
LMNA-208ENST00000448611 KIAA0087Q14695 138 aa11.98□□□□□ -0.49
LMNA-208ENST00000448611 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
LMNA-208ENST00000448611 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
LMNA-208ENST00000448611 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
LMNA-208ENST00000448611 MALP21145 153 aa11.97□□□□□ -0.49
LMNA-208ENST00000448611 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
LMNA-208ENST00000448611 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
LMNA-208ENST00000448611 CRPP02741 224 aa11.96□□□□□ -0.5
LMNA-208ENST00000448611 C2orf82Q6UX34 121 aa11.96□□□□□ -0.5
LMNA-208ENST00000448611 UBE2WQ96B02 151 aa11.96□□□□□ -0.5
LMNA-208ENST00000448611 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
LMNA-208ENST00000448611 H3BMG7 143 aa11.95□□□□□ -0.5
LMNA-208ENST00000448611 H7C2G1 150 aa11.95□□□□□ -0.5
LMNA-208ENST00000448611 LINC00158P58513 81 aa11.95□□□□□ -0.5
LMNA-208ENST00000448611 C15orf53Q8NAA6 179 aa11.95□□□□□ -0.5
LMNA-208ENST00000448611 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
LMNA-208ENST00000448611 B9D2Q9BPU9 175 aa11.94□□□□□ -0.5
LMNA-208ENST00000448611 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
LMNA-208ENST00000448611 PFN2P35080 140 aa11.93□□□□□ -0.5
LMNA-208ENST00000448611 CXCL5P42830 114 aa11.93□□□□□ -0.5
LMNA-208ENST00000448611 CKS1BP61024 79 aa11.93□□□□□ -0.5
LMNA-208ENST00000448611 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
LMNA-208ENST00000448611 Q1RN00 199 aa11.92□□□□□ -0.5
LMNA-208ENST00000448611 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
LMNA-208ENST00000448611 PSMB2P49721 201 aa11.92□□□□□ -0.5
LMNA-208ENST00000448611 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
LMNA-208ENST00000448611 TCL1BO95988 128 aa11.9□□□□□ -0.5
LMNA-208ENST00000448611 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
LMNA-208ENST00000448611 TRBV20-1A0A075B6N2 111 aa11.9□□□□□ -0.51
LMNA-208ENST00000448611 SCGB1C2P0DMR2 95 aa11.9□□□□□ -0.51
LMNA-208ENST00000448611 KRTAP26-1Q6PEX3 210 aa11.9□□□□□ -0.51
LMNA-208ENST00000448611 PRO0461Q9UI25 63 aa11.9□□□□□ -0.51
LMNA-208ENST00000448611 F8W1H4 67 aa11.89□□□□□ -0.51
LMNA-208ENST00000448611 TRIAP1O43715 76 aa11.89□□□□□ -0.51
LMNA-208ENST00000448611 CCL18P55774 89 aa11.89□□□□□ -0.51
LMNA-208ENST00000448611 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
LMNA-208ENST00000448611 DNAH10OSP0CZ25 163 aa11.88□□□□□ -0.51
LMNA-208ENST00000448611 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
LMNA-208ENST00000448611 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
LMNA-208ENST00000448611 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
LMNA-208ENST00000448611 COX17Q14061 63 aa11.86□□□□□ -0.51
LMNA-208ENST00000448611 C6orf223Q8N319 242 aa11.86□□□□□ -0.51
LMNA-208ENST00000448611 DNAH9Q9NYC9 4486 aa11.85□□□□□ -0.51
LMNA-208ENST00000448611 PRKDCP78527 4128 aaKnown RBP11.85□□□□□ -0.51
LMNA-208ENST00000448611 IGKV2-28A0A075B6P5 120 aa11.85□□□□□ -0.51
LMNA-208ENST00000448611 IGKV2D-28P01615 120 aa11.85□□□□□ -0.51
LMNA-208ENST00000448611 WFDC2Q14508 124 aa11.85□□□□□ -0.51
LMNA-208ENST00000448611 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
LMNA-208ENST00000448611 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
LMNA-208ENST00000448611 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
LMNA-208ENST00000448611 UNQ6190/PRO20217Q6UXQ8 127 aa11.84□□□□□ -0.51
LMNA-208ENST00000448611 LINC00526Q96FQ7 95 aa11.84□□□□□ -0.51
LMNA-208ENST00000448611 NHLRC4P0CG21 123 aaPredicted RBP11.84□□□□□ -0.51
LMNA-208ENST00000448611 C9orf116Q5BN46 136 aaPredicted RBP11.83□□□□□ -0.52
LMNA-208ENST00000448611 LINC00337Q8N6G1 96 aa11.83□□□□□ -0.52
LMNA-208ENST00000448611 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
LMNA-208ENST00000448611 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
LMNA-208ENST00000448611 TRAV13-2A0A0B4J235 113 aa11.82□□□□□ -0.52
LMNA-208ENST00000448611 C1orf43Q9BWL3 253 aa11.82□□□□□ -0.52
LMNA-208ENST00000448611 COX6CP09669 75 aa11.81□□□□□ -0.52
LMNA-208ENST00000448611 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
LMNA-208ENST00000448611 GVQW2A0A096LPI5 108 aaPredicted RBP11.8□□□□□ -0.52
LMNA-208ENST00000448611 ATXN8Q156A1 80 aa11.8□□□□□ -0.52
LMNA-208ENST00000448611 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
LMNA-208ENST00000448611 C15orf56Q8N910 161 aa11.79□□□□□ -0.52
LMNA-208ENST00000448611 IGKV2D-24A0A075B6R9 120 aa11.78□□□□□ -0.52
LMNA-208ENST00000448611 MUC7Q8TAX7 377 aa11.78□□□□□ -0.52
LMNA-208ENST00000448611 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.53
LMNA-208ENST00000448611 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.53
LMNA-208ENST00000448611 ZNF561-AS1K7EIQ3 104 aa11.76□□□□□ -0.53
LMNA-208ENST00000448611 ETDBQ3ZM63 59 aa11.76□□□□□ -0.53
LMNA-208ENST00000448611 CLEC2BQ92478 149 aa11.76□□□□□ -0.53
LMNA-208ENST00000448611 Q9HAA7 133 aa11.76□□□□□ -0.53
LMNA-208ENST00000448611 LST1O00453 97 aa11.75□□□□□ -0.53
LMNA-208ENST00000448611 NDUFC2O95298 119 aa11.75□□□□□ -0.53
LMNA-208ENST00000448611 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
LMNA-208ENST00000448611 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
LMNA-208ENST00000448611 STAB2Q8WWQ8 2551 aa11.75□□□□□ -0.53
LMNA-208ENST00000448611 C9JAW5 83 aa11.74□□□□□ -0.53
LMNA-208ENST00000448611 K7ERU9 68 aa11.74□□□□□ -0.53
LMNA-208ENST00000448611 CAMK2N2Q96S95 79 aa11.74□□□□□ -0.53
LMNA-208ENST00000448611 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
LMNA-208ENST00000448611 SLC25A20O43772 301 aa11.72□□□□□ -0.53
LMNA-208ENST00000448611 C2orf48Q96LS8 159 aa11.72□□□□□ -0.53
LMNA-208ENST00000448611 Q8NDZ9 215 aa11.72□□□□□ -0.53
LMNA-208ENST00000448611 SMIM11BQ8TCY0 68 aa11.72□□□□□ -0.53
LMNA-208ENST00000448611 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
LMNA-208ENST00000448611 M0QXV9 152 aa11.7□□□□□ -0.54
LMNA-208ENST00000448611 Q6ZRU5 148 aa11.7□□□□□ -0.54
LMNA-208ENST00000448611 OR13C6PQ8NH95 151 aa11.7□□□□□ -0.54
LMNA-208ENST00000448611 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
LMNA-208ENST00000448611 TGP01266 2768 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms