RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GEMIN7Q9H840 131 aaKnown RBP16.88■□□□□ 0.29
CBX4-202ENST00000448310 RPL13AP40429 203 aaKnown RBP16.87■□□□□ 0.29
CBX4-202ENST00000448310 F8VRH5 84 aa16.86■□□□□ 0.29
CBX4-202ENST00000448310 SEC11AP67812 179 aa16.86■□□□□ 0.29
CBX4-202ENST00000448310 KIAA1644Q3SXP7 199 aa16.86■□□□□ 0.29
CBX4-202ENST00000448310 PAPPA-AS1Q5QFB9 102 aa16.86■□□□□ 0.29
CBX4-202ENST00000448310 TIMM17AQ99595 171 aa16.86■□□□□ 0.29
CBX4-202ENST00000448310 TOMM6Q96B49 74 aa16.85■□□□□ 0.29
CBX4-202ENST00000448310 NUPR1O60356 82 aa16.84■□□□□ 0.29
CBX4-202ENST00000448310 PRR4Q16378 134 aa16.84■□□□□ 0.29
CBX4-202ENST00000448310 LBHQ53QV2 105 aaPredicted RBP16.84■□□□□ 0.29
CBX4-202ENST00000448310 RAB14P61106 215 aa16.83■□□□□ 0.28
CBX4-202ENST00000448310 CARHSP1Q9Y2V2 147 aaKnown RBP16.82■□□□□ 0.28
CBX4-202ENST00000448310 G0S2P27469 103 aa16.81■□□□□ 0.28
CBX4-202ENST00000448310 MRPL55Q7Z7F7 128 aaKnown RBP16.81■□□□□ 0.28
CBX4-202ENST00000448310 SMIM1B2RUZ4 78 aa16.8■□□□□ 0.28
CBX4-202ENST00000448310 ADCYAP1P18509 176 aa16.8■□□□□ 0.28
CBX4-202ENST00000448310 SCGB3A1Q96QR1 104 aa16.8■□□□□ 0.28
CBX4-202ENST00000448310 CXCL5P42830 114 aa16.79■□□□□ 0.28
CBX4-202ENST00000448310 ERASQ7Z444 233 aa16.79■□□□□ 0.28
CBX4-202ENST00000448310 TP73-AS1Q9UF72 201 aa16.78■□□□□ 0.28
CBX4-202ENST00000448310 COX7B2Q8TF08 81 aa16.76■□□□□ 0.27
CBX4-202ENST00000448310 RPL37AP8A6NKH3 93 aa16.75■□□□□ 0.27
CBX4-202ENST00000448310 BCE1O60756 84 aa16.75■□□□□ 0.27
CBX4-202ENST00000448310 TINCRA0A1B0GVN0 87 aa16.74■□□□□ 0.27
CBX4-202ENST00000448310 TSPAN13O95857 204 aa16.74■□□□□ 0.27
CBX4-202ENST00000448310 RPL28P46779 137 aaKnown RBP16.74■□□□□ 0.27
CBX4-202ENST00000448310 PDZD11Q5EBL8 140 aa16.74■□□□□ 0.27
CBX4-202ENST00000448310 LINC00167Q96N53 147 aa16.74■□□□□ 0.27
CBX4-202ENST00000448310 A0A087X002 238 aa16.73■□□□□ 0.27
CBX4-202ENST00000448310 GAGE10A6NGK3 116 aa16.73■□□□□ 0.27
CBX4-202ENST00000448310 SPINK8P0C7L1 97 aa16.72■□□□□ 0.27
CBX4-202ENST00000448310 IGLV5-45A0A087WSX0 123 aa16.71■□□□□ 0.27
CBX4-202ENST00000448310 RAB5BP61020 215 aa16.71■□□□□ 0.27
CBX4-202ENST00000448310 CST9LQ9H4G1 147 aa16.7■□□□□ 0.26
CBX4-202ENST00000448310 MUC2Q02817 5179 aa16.7■□□□□ 0.26
CBX4-202ENST00000448310 CLLU1Q5K131 121 aa16.69■□□□□ 0.26
CBX4-202ENST00000448310 TRAV9-1A0A075B6T8 112 aa16.67■□□□□ 0.26
CBX4-202ENST00000448310 LINC01546A6NGU7 62 aa16.67■□□□□ 0.26
CBX4-202ENST00000448310 ANAPC11Q9NYG5 84 aa16.66■□□□□ 0.26
CBX4-202ENST00000448310 CRYGAP11844 174 aa16.65■□□□□ 0.26
CBX4-202ENST00000448310 TYMSOSQ8TAI1 123 aa16.65■□□□□ 0.26
CBX4-202ENST00000448310 TMEM218A2RU14 115 aa16.64■□□□□ 0.25
CBX4-202ENST00000448310 PMVKQ15126 192 aa16.64■□□□□ 0.25
CBX4-202ENST00000448310 GNB1LQ9BYB4 327 aa16.64■□□□□ 0.25
CBX4-202ENST00000448310 IGLV5-37A0A075B6J1 123 aa16.63■□□□□ 0.25
CBX4-202ENST00000448310 LINC01549A6NIU2 74 aa16.62■□□□□ 0.25
CBX4-202ENST00000448310 SCO1O75880 301 aa16.62■□□□□ 0.25
CBX4-202ENST00000448310 NKAPP1Q8N9T2 125 aa16.62■□□□□ 0.25
CBX4-202ENST00000448310 FA2HQ7L5A8 372 aa16.61■□□□□ 0.25
CBX4-202ENST00000448310 S100PP25815 95 aa16.6■□□□□ 0.25
CBX4-202ENST00000448310 UBE2AP49459 152 aa16.6■□□□□ 0.25
CBX4-202ENST00000448310 UQCC3Q6UW78 93 aa16.6■□□□□ 0.25
CBX4-202ENST00000448310 KRTAP13-1Q8IUC0 172 aa16.6■□□□□ 0.25
CBX4-202ENST00000448310 MRPL18Q9H0U6 180 aaKnown RBP16.59■□□□□ 0.25
CBX4-202ENST00000448310 SMCO4Q9NRQ5 59 aa16.59■□□□□ 0.25
CBX4-202ENST00000448310 IGKV2-28A0A075B6P5 120 aa16.58■□□□□ 0.24
CBX4-202ENST00000448310 ATP5LO75964 103 aa16.58■□□□□ 0.24
CBX4-202ENST00000448310 IGKV2D-28P01615 120 aa16.58■□□□□ 0.24
CBX4-202ENST00000448310 H3BRM9 83 aa16.57■□□□□ 0.24
CBX4-202ENST00000448310 PFN2P35080 140 aa16.57■□□□□ 0.24
CBX4-202ENST00000448310 KRTAP13-2Q52LG2 175 aa16.57■□□□□ 0.24
CBX4-202ENST00000448310 FABP9Q0Z7S8 132 aa16.56■□□□□ 0.24
CBX4-202ENST00000448310 SEC11CQ9BY50 192 aa16.54■□□□□ 0.24
CBX4-202ENST00000448310 IGLC3P0DOY3 106 aa16.53■□□□□ 0.24
CBX4-202ENST00000448310 NDUFA6P56556 154 aa16.53■□□□□ 0.24
CBX4-202ENST00000448310 IGLV5-39A0A0G2JS06 123 aa16.52■□□□□ 0.24
CBX4-202ENST00000448310 A0A096LNJ9 63 aa16.51■□□□□ 0.23
CBX4-202ENST00000448310 PRLHP81277 87 aa16.51■□□□□ 0.23
CBX4-202ENST00000448310 COX19Q49B96 90 aa16.51■□□□□ 0.23
CBX4-202ENST00000448310 ZNF22P17026 224 aaPredicted RBP16.5■□□□□ 0.23
CBX4-202ENST00000448310 IFITM2Q01629 132 aa16.5■□□□□ 0.23
CBX4-202ENST00000448310 VPREB1P12018 145 aa16.49■□□□□ 0.23
CBX4-202ENST00000448310 RETNLBQ9BQ08 111 aa16.49■□□□□ 0.23
CBX4-202ENST00000448310 SND1-IT1Q9HBX3 110 aa16.49■□□□□ 0.23
CBX4-202ENST00000448310 ERG28Q9UKR5 140 aa16.48■□□□□ 0.23
CBX4-202ENST00000448310 TMEM238C9JI98 176 aa16.47■□□□□ 0.23
CBX4-202ENST00000448310 FAM229BQ4G0N7 80 aa16.47■□□□□ 0.23
CBX4-202ENST00000448310 URB1-AS1Q96HZ7 61 aa16.47■□□□□ 0.23
CBX4-202ENST00000448310 ZNF625Q96I27 306 aaPredicted RBP16.47■□□□□ 0.23
CBX4-202ENST00000448310 FAM19A1Q7Z5A9 133 aa16.46■□□□□ 0.23
CBX4-202ENST00000448310 LINC00304Q8N9R0 145 aa16.45■□□□□ 0.22
CBX4-202ENST00000448310 TMEM126AQ9H061 195 aa16.45■□□□□ 0.22
CBX4-202ENST00000448310 PMCHL1Q16048 86 aa16.44■□□□□ 0.22
CBX4-202ENST00000448310 Q8NDZ9 215 aa16.44■□□□□ 0.22
CBX4-202ENST00000448310 RPS10P5Q9NQ39 176 aa16.44■□□□□ 0.22
CBX4-202ENST00000448310 COMMD7Q86VX2 200 aa16.43■□□□□ 0.22
CBX4-202ENST00000448310 C18orf32Q8TCD1 76 aa16.42■□□□□ 0.22
CBX4-202ENST00000448310 IGKV2D-26A0A0A0MRZ7 120 aa16.41■□□□□ 0.22
CBX4-202ENST00000448310 RPL24P83731 157 aaKnown RBP16.41■□□□□ 0.22
CBX4-202ENST00000448310 C11orf86A6NJI1 115 aa16.4■□□□□ 0.22
CBX4-202ENST00000448310 M0R378 163 aa16.4■□□□□ 0.22
CBX4-202ENST00000448310 HBDP02042 147 aa16.4■□□□□ 0.22
CBX4-202ENST00000448310 LINC00614P0C842 121 aa16.4■□□□□ 0.22
CBX4-202ENST00000448310 A0A0U1RQV1 116 aa16.39■□□□□ 0.21
CBX4-202ENST00000448310 COX17Q14061 63 aa16.39■□□□□ 0.21
CBX4-202ENST00000448310 RHEBQ15382 184 aa16.39■□□□□ 0.21
CBX4-202ENST00000448310 C10orf91Q5T1B1 145 aa16.38■□□□□ 0.21
CBX4-202ENST00000448310 TMEM170BQ5T4T1 132 aa16.38■□□□□ 0.21
CBX4-202ENST00000448310 TRAPPC1Q9Y5R8 145 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms