RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 UBR4Q5T4S7 5183 aa9.51□□□□□ -0.89
HMGB2-203ENST00000446922 LINC01546A6NGU7 62 aa9.51□□□□□ -0.89
HMGB2-203ENST00000446922 S100PP25815 95 aa9.51□□□□□ -0.89
HMGB2-203ENST00000446922 CKS1BP61024 79 aa9.51□□□□□ -0.89
HMGB2-203ENST00000446922 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
HMGB2-203ENST00000446922 FAM168BA1KXE4 195 aa9.5□□□□□ -0.89
HMGB2-203ENST00000446922 ADCYAP1P18509 176 aa9.5□□□□□ -0.89
HMGB2-203ENST00000446922 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
HMGB2-203ENST00000446922 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
HMGB2-203ENST00000446922 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
HMGB2-203ENST00000446922 CXCL5P42830 114 aa9.49□□□□□ -0.89
HMGB2-203ENST00000446922 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
HMGB2-203ENST00000446922 M0QXV9 152 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 IFITM2Q01629 132 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 KRTAP7-1Q8IUC3 87 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 SCGB3A1Q96QR1 104 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
HMGB2-203ENST00000446922 F8VRH5 84 aa9.47□□□□□ -0.89
HMGB2-203ENST00000446922 GHRHP01286 108 aa9.47□□□□□ -0.89
HMGB2-203ENST00000446922 C9orf129Q5T035 196 aaKnown RBP9.47□□□□□ -0.89
HMGB2-203ENST00000446922 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
HMGB2-203ENST00000446922 H0Y9J4 135 aa9.46□□□□□ -0.9
HMGB2-203ENST00000446922 UBE2BP63146 152 aa9.46□□□□□ -0.9
HMGB2-203ENST00000446922 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
HMGB2-203ENST00000446922 PDZD11Q5EBL8 140 aa9.45□□□□□ -0.9
HMGB2-203ENST00000446922 C10orf91Q5T1B1 145 aa9.45□□□□□ -0.9
HMGB2-203ENST00000446922 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
HMGB2-203ENST00000446922 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
HMGB2-203ENST00000446922 RHEBQ15382 184 aa9.44□□□□□ -0.9
HMGB2-203ENST00000446922 TP73-AS1Q9UF72 201 aa9.44□□□□□ -0.9
HMGB2-203ENST00000446922 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
HMGB2-203ENST00000446922 NUPR1O60356 82 aa9.43□□□□□ -0.9
HMGB2-203ENST00000446922 LINC00469Q8N7U9 141 aa9.43□□□□□ -0.9
HMGB2-203ENST00000446922 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
HMGB2-203ENST00000446922 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
HMGB2-203ENST00000446922 PMVKQ15126 192 aa9.42□□□□□ -0.9
HMGB2-203ENST00000446922 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
HMGB2-203ENST00000446922 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
HMGB2-203ENST00000446922 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
HMGB2-203ENST00000446922 LRP2P98164 4655 aa9.41□□□□□ -0.9
HMGB2-203ENST00000446922 FABP9Q0Z7S8 132 aa9.41□□□□□ -0.9
HMGB2-203ENST00000446922 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
HMGB2-203ENST00000446922 SMCO4Q9NRQ5 59 aa9.41□□□□□ -0.9
HMGB2-203ENST00000446922 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
HMGB2-203ENST00000446922 COMMD7Q86VX2 200 aa9.4□□□□□ -0.9
HMGB2-203ENST00000446922 ZNF861PO60384 105 aa9.39□□□□□ -0.91
HMGB2-203ENST00000446922 H3BRM9 83 aa9.38□□□□□ -0.91
HMGB2-203ENST00000446922 KRTAP1-4P0C5Y4 121 aa9.38□□□□□ -0.91
HMGB2-203ENST00000446922 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
HMGB2-203ENST00000446922 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
HMGB2-203ENST00000446922 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
HMGB2-203ENST00000446922 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
HMGB2-203ENST00000446922 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
HMGB2-203ENST00000446922 LINC00614P0C842 121 aa9.36□□□□□ -0.91
HMGB2-203ENST00000446922 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
HMGB2-203ENST00000446922 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
HMGB2-203ENST00000446922 RAB5BP61020 215 aa9.34□□□□□ -0.91
HMGB2-203ENST00000446922 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
HMGB2-203ENST00000446922 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
HMGB2-203ENST00000446922 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
HMGB2-203ENST00000446922 ATP5LO75964 103 aa9.33□□□□□ -0.92
HMGB2-203ENST00000446922 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
HMGB2-203ENST00000446922 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
HMGB2-203ENST00000446922 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
HMGB2-203ENST00000446922 BCE1O60756 84 aa9.32□□□□□ -0.92
HMGB2-203ENST00000446922 HBDP02042 147 aa9.32□□□□□ -0.92
HMGB2-203ENST00000446922 SFTA2Q6UW10 78 aa9.32□□□□□ -0.92
HMGB2-203ENST00000446922 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
HMGB2-203ENST00000446922 A0A096LNJ9 63 aa9.31□□□□□ -0.92
HMGB2-203ENST00000446922 COX17Q14061 63 aa9.31□□□□□ -0.92
HMGB2-203ENST00000446922 SNAPINO95295 136 aa9.3□□□□□ -0.92
HMGB2-203ENST00000446922 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
HMGB2-203ENST00000446922 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
HMGB2-203ENST00000446922 SVBPQ8N300 66 aa9.29□□□□□ -0.92
HMGB2-203ENST00000446922 NKAPP1Q8N9T2 125 aa9.29□□□□□ -0.92
HMGB2-203ENST00000446922 ZNF22P17026 224 aaPredicted RBP9.28□□□□□ -0.92
HMGB2-203ENST00000446922 NDUFA6P56556 154 aa9.28□□□□□ -0.92
HMGB2-203ENST00000446922 APOC3P02656 99 aa9.27□□□□□ -0.93
HMGB2-203ENST00000446922 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
HMGB2-203ENST00000446922 BAGE3Q86Y29 109 aa9.26□□□□□ -0.93
HMGB2-203ENST00000446922 RPL24P83731 157 aaKnown RBP9.25□□□□□ -0.93
HMGB2-203ENST00000446922 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
HMGB2-203ENST00000446922 CRYGAP11844 174 aa9.24□□□□□ -0.93
HMGB2-203ENST00000446922 PFN2P35080 140 aa9.24□□□□□ -0.93
HMGB2-203ENST00000446922 CHCHD1Q96BP2 118 aaKnown RBP9.24□□□□□ -0.93
HMGB2-203ENST00000446922 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
HMGB2-203ENST00000446922 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
HMGB2-203ENST00000446922 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
HMGB2-203ENST00000446922 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 VPREB1P12018 145 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 TMEM170BQ5T4T1 132 aa9.22□□□□□ -0.93
HMGB2-203ENST00000446922 CHTOPQ9Y3Y2 248 aaKnown RBP9.22□□□□□ -0.93
HMGB2-203ENST00000446922 UBE2AP49459 152 aa9.21□□□□□ -0.94
HMGB2-203ENST00000446922 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
HMGB2-203ENST00000446922 YPEL4Q96NS1 127 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms