RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 CELA1Q9UNI1 258 aa12.29□□□□□ -0.44
CLDN9-201ENST00000445369 MIFP14174 115 aa12.28□□□□□ -0.44
CLDN9-201ENST00000445369 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
CLDN9-201ENST00000445369 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
CLDN9-201ENST00000445369 Q8IZM0 81 aa12.28□□□□□ -0.44
CLDN9-201ENST00000445369 TRACP01848 142 aa12.28□□□□□ -0.44
CLDN9-201ENST00000445369 WFDC9Q8NEX5 89 aa12.28□□□□□ -0.44
CLDN9-201ENST00000445369 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
CLDN9-201ENST00000445369 PFN2P35080 140 aa12.27□□□□□ -0.45
CLDN9-201ENST00000445369 C6orf226Q5I0X4 101 aa12.27□□□□□ -0.45
CLDN9-201ENST00000445369 WIPF1O43516 503 aa12.26□□□□□ -0.45
CLDN9-201ENST00000445369 ATP5G1P05496 136 aa12.26□□□□□ -0.45
CLDN9-201ENST00000445369 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
CLDN9-201ENST00000445369 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
CLDN9-201ENST00000445369 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
CLDN9-201ENST00000445369 LINC00269Q8N2A0 174 aa12.25□□□□□ -0.45
CLDN9-201ENST00000445369 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
CLDN9-201ENST00000445369 Q8N3U1 123 aa12.24□□□□□ -0.45
CLDN9-201ENST00000445369 CYSRT1A8MQ03 144 aa12.23□□□□□ -0.45
CLDN9-201ENST00000445369 IGHV4-30-4P0DP06 118 aa12.23□□□□□ -0.45
CLDN9-201ENST00000445369 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
CLDN9-201ENST00000445369 SPART-AS1P0CW21 52 aa12.22□□□□□ -0.45
CLDN9-201ENST00000445369 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
CLDN9-201ENST00000445369 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
CLDN9-201ENST00000445369 TENM1Q9UKZ4 2725 aa12.22□□□□□ -0.45
CLDN9-201ENST00000445369 ANGP03950 147 aaKnown RBP12.22□□□□□ -0.45
CLDN9-201ENST00000445369 REG3AQ06141 175 aa12.22□□□□□ -0.45
CLDN9-201ENST00000445369 FAM240AA0A1B0GVK7 77 aa12.21□□□□□ -0.45
CLDN9-201ENST00000445369 KIAA0087Q14695 138 aa12.21□□□□□ -0.45
CLDN9-201ENST00000445369 MRPL23Q16540 153 aaKnown RBP12.2□□□□□ -0.46
CLDN9-201ENST00000445369 IGLV10-54A0A075B6I4 117 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 CXCL5P42830 114 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 CKS1BP61024 79 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 C22orf24Q9Y442 160 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 A0A1B0GV72 72 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 BAALC-AS2P0C853 105 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 LELP1Q5T871 98 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 MAST4O15021 2626 aa12.18□□□□□ -0.46
CLDN9-201ENST00000445369 HTN3P15516 51 aa12.17□□□□□ -0.46
CLDN9-201ENST00000445369 SNCGO76070 127 aa12.17□□□□□ -0.46
CLDN9-201ENST00000445369 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
CLDN9-201ENST00000445369 TRRAPQ9Y4A5 3859 aa12.16□□□□□ -0.46
CLDN9-201ENST00000445369 MALP21145 153 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 A0A087WYN8 130 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 H0YGX0 51 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 COX17Q14061 63 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 C15orf53Q8NAA6 179 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 Q9HAA7 133 aa12.15□□□□□ -0.46
CLDN9-201ENST00000445369 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
CLDN9-201ENST00000445369 ATRQ13535 2644 aa12.14□□□□□ -0.47
CLDN9-201ENST00000445369 OR13C6PQ8NH95 151 aa12.13□□□□□ -0.47
CLDN9-201ENST00000445369 PRR34Q9NV39 138 aa12.12□□□□□ -0.47
CLDN9-201ENST00000445369 NDUFC2O95298 119 aa12.11□□□□□ -0.47
CLDN9-201ENST00000445369 Q6Q795 121 aa12.11□□□□□ -0.47
CLDN9-201ENST00000445369 F8P00451 2351 aa12.11□□□□□ -0.47
CLDN9-201ENST00000445369 DNAL4O96015 105 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 ACYP1P07311 99 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
CLDN9-201ENST00000445369 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
CLDN9-201ENST00000445369 OXLD1Q5BKU9 147 aa12.09□□□□□ -0.47
CLDN9-201ENST00000445369 C9orf116Q5BN46 136 aaPredicted RBP12.09□□□□□ -0.47
CLDN9-201ENST00000445369 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
CLDN9-201ENST00000445369 KRTAP10-11P60412 298 aa12.08□□□□□ -0.48
CLDN9-201ENST00000445369 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
CLDN9-201ENST00000445369 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
CLDN9-201ENST00000445369 LECT2O14960 151 aa12.07□□□□□ -0.48
CLDN9-201ENST00000445369 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
CLDN9-201ENST00000445369 INAFM2P0DMQ5 153 aa12.07□□□□□ -0.48
CLDN9-201ENST00000445369 PRR3P79522 188 aaKnown RBP12.07□□□□□ -0.48
CLDN9-201ENST00000445369 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
CLDN9-201ENST00000445369 RETNQ9HD89 108 aa12.06□□□□□ -0.48
CLDN9-201ENST00000445369 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
CLDN9-201ENST00000445369 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
CLDN9-201ENST00000445369 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
CLDN9-201ENST00000445369 Q8NDZ9 215 aa12.04□□□□□ -0.48
CLDN9-201ENST00000445369 H3BNG1 76 aa12.04□□□□□ -0.48
CLDN9-201ENST00000445369 UNQ6190/PRO20217Q6UXQ8 127 aa12.04□□□□□ -0.48
CLDN9-201ENST00000445369 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
CLDN9-201ENST00000445369 A0A0J9YWU9 116 aa12.03□□□□□ -0.48
CLDN9-201ENST00000445369 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
CLDN9-201ENST00000445369 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.48
CLDN9-201ENST00000445369 ANAPC13Q9BS18 74 aa12.02□□□□□ -0.48
CLDN9-201ENST00000445369 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
CLDN9-201ENST00000445369 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
CLDN9-201ENST00000445369 SMCR5Q8TEV8 140 aa12.02□□□□□ -0.49
CLDN9-201ENST00000445369 OBSCN-AS1Q96MR7 158 aa12.02□□□□□ -0.49
CLDN9-201ENST00000445369 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
CLDN9-201ENST00000445369 KPRPQ5T749 579 aaPredicted RBP12.01□□□□□ -0.49
CLDN9-201ENST00000445369 LINC00526Q96FQ7 95 aa12.01□□□□□ -0.49
CLDN9-201ENST00000445369 LINC00167Q96N53 147 aa12.01□□□□□ -0.49
CLDN9-201ENST00000445369 NDUFV3P56181 108 aaKnown RBP12.01□□□□□ -0.49
CLDN9-201ENST00000445369 A0A1B0GX51 115 aa12□□□□□ -0.49
CLDN9-201ENST00000445369 NCR3O14931 201 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 SLPIP03973 132 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 Q6ZTC4 211 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
CLDN9-201ENST00000445369 GVQW2A0A096LPI5 108 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms