RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 TET2Q6N021 2002 aaPredicted RBP3.65□□□□□ -1.82
SCN11A-202ENST00000444237 C9orf116Q5BN46 136 aaPredicted RBP3.65□□□□□ -1.82
SCN11A-202ENST00000444237 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.82
SCN11A-202ENST00000444237 TTC28Q96AY4 2481 aa3.65□□□□□ -1.82
SCN11A-202ENST00000444237 Q6ZRU5 148 aa3.65□□□□□ -1.83
SCN11A-202ENST00000444237 Q9UF83 564 aa3.65□□□□□ -1.83
SCN11A-202ENST00000444237 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
SCN11A-202ENST00000444237 CACNA1HO95180 2353 aa3.65□□□□□ -1.83
SCN11A-202ENST00000444237 KLK12Q9UKR0 248 aa3.65□□□□□ -1.83
SCN11A-202ENST00000444237 ACACAQ13085 2346 aa3.64□□□□□ -1.83
SCN11A-202ENST00000444237 BBC3Q96PG8 261 aaPredicted RBP3.64□□□□□ -1.83
SCN11A-202ENST00000444237 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
SCN11A-202ENST00000444237 LOC101927531A0A1B0GV80 90 aa3.64□□□□□ -1.83
SCN11A-202ENST00000444237 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
SCN11A-202ENST00000444237 DEFB114Q30KQ6 69 aa3.64□□□□□ -1.83
SCN11A-202ENST00000444237 C11orf72Q8NBR9 251 aa3.64□□□□□ -1.83
SCN11A-202ENST00000444237 INAFM1C9JVW0 142 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 COL6A6A6NMZ7 2263 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 A6NDX4 124 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 PSCAO43653 123 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 SPTA1P02549 2419 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 EIF4EBP3O60516 100 aaPredicted RBP3.63□□□□□ -1.83
SCN11A-202ENST00000444237 DSCAMO60469 2012 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 IGHV4-61A0A0C4DH41 118 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 LY6G6DO95868 133 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 OXTP01178 125 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 ZFP36P26651 326 aaKnown RBP3.63□□□□□ -1.83
SCN11A-202ENST00000444237 DEFB136Q30KP8 78 aa3.63□□□□□ -1.83
SCN11A-202ENST00000444237 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
SCN11A-202ENST00000444237 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
SCN11A-202ENST00000444237 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
SCN11A-202ENST00000444237 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
SCN11A-202ENST00000444237 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
SCN11A-202ENST00000444237 OBSCN-AS1Q96MR7 158 aa3.62□□□□□ -1.83
SCN11A-202ENST00000444237 FBXL19-AS1Q494R0 122 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 CYSTM1Q9H1C7 97 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 SPTAN1Q13813 2472 aaKnown RBP3.61□□□□□ -1.83
SCN11A-202ENST00000444237 OTOGLQ3ZCN5 2332 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 DNAH12Q6ZR08 3092 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 SYCNQ0VAF6 134 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 LYPD5Q6UWN5 251 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 C4orf3Q8WVX3 66 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 CYSRT1A8MQ03 144 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 SPART-AS1P0CW21 52 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 IGHV4-38-2P0DP08 117 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 SORL1Q92673 2214 aa3.61□□□□□ -1.83
SCN11A-202ENST00000444237 CENPFP49454 3210 aa3.6□□□□□ -1.83
SCN11A-202ENST00000444237 C9orf66Q5T8R8 295 aa3.6□□□□□ -1.83
SCN11A-202ENST00000444237 LINC01006Q8NI28 216 aa3.6□□□□□ -1.83
SCN11A-202ENST00000444237 A0A1B0GU69 56 aa3.6□□□□□ -1.83
SCN11A-202ENST00000444237 EGFEM1PQ0D2K5 195 aa3.6□□□□□ -1.83
SCN11A-202ENST00000444237 IGLV4-60A0A075B6I1 120 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 UNQ6190/PRO20217Q6UXQ8 127 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 IGHV3OR16-9A0A0B4J2B5 98 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 Q6ZSN1 163 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 COA5Q86WW8 74 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 PCNTO95613 3336 aa3.59□□□□□ -1.83
SCN11A-202ENST00000444237 LOC100131303A0A0U1RQF7 123 aa3.59□□□□□ -1.84
SCN11A-202ENST00000444237 TP53AIP1Q9HCN2 124 aa3.59□□□□□ -1.84
SCN11A-202ENST00000444237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.59□□□□□ -1.84
SCN11A-202ENST00000444237 A8MTW9 85 aa3.59□□□□□ -1.84
SCN11A-202ENST00000444237 HTTP42858 3142 aa3.58□□□□□ -1.84
SCN11A-202ENST00000444237 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
SCN11A-202ENST00000444237 IGLV1-40P01703 118 aa3.58□□□□□ -1.84
SCN11A-202ENST00000444237 LINC00167Q96N53 147 aa3.58□□□□□ -1.84
SCN11A-202ENST00000444237 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 UBE2DNLQ8IWF7 75 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 SPANXA2-OT1Q8N9U9 137 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 IGHV4-31P0DP07 118 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 LINC01554Q52M75 96 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.57□□□□□ -1.84
SCN11A-202ENST00000444237 FSHBP01225 129 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 Q6ZTC4 211 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 Q8NBF4 154 aa3.57□□□□□ -1.84
SCN11A-202ENST00000444237 GVINP1Q7Z2Y8 2422 aa3.56□□□□□ -1.84
SCN11A-202ENST00000444237 A0A087WSZ3 146 aa3.56□□□□□ -1.84
SCN11A-202ENST00000444237 ACYP2P14621 99 aa3.56□□□□□ -1.84
SCN11A-202ENST00000444237 LELP1Q5T871 98 aa3.56□□□□□ -1.84
SCN11A-202ENST00000444237 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
SCN11A-202ENST00000444237 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
SCN11A-202ENST00000444237 LMO4P61968 165 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 Q75L30 129 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 LINC00588Q9Y4M8 146 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
SCN11A-202ENST00000444237 IGHV4-30-4P0DP06 118 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 FAM229BQ4G0N7 80 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 SMR3AQ99954 134 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
SCN11A-202ENST00000444237 FAM229AH3BQW9 127 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 Q6ZRP5 223 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 Q9BRP9 147 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 C11orf71Q6IPW1 123 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 A0A096LNI7 61 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 EPM2AB3EWF7 344 aa3.54□□□□□ -1.84
SCN11A-202ENST00000444237 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms