RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
SMARCA4-204ENST00000444061 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 PDE6GP18545 87 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 C5orf47Q569G3 176 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 A0A087WZ39 114 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 C3orf22Q8N5N4 141 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 Q8NAQ8 132 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 COL6A5A8TX70 2615 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
SMARCA4-204ENST00000444061 MAPKAPK5-AS1Q8N8E1 139 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 FRYLO94915 3013 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 UBE2D1P51668 147 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 C7orf33Q8WU49 177 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 MUC4Q99102 2169 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 CR1P17927 2039 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
SMARCA4-204ENST00000444061 Q6Q795 121 aa9.93□□□□□ -0.82
SMARCA4-204ENST00000444061 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
SMARCA4-204ENST00000444061 ATP5EP2Q5VTU8 51 aa9.93□□□□□ -0.82
SMARCA4-204ENST00000444061 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
SMARCA4-204ENST00000444061 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
SMARCA4-204ENST00000444061 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
SMARCA4-204ENST00000444061 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
SMARCA4-204ENST00000444061 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
SMARCA4-204ENST00000444061 LOC107984640A0A0U1RRK4 108 aa9.91□□□□□ -0.82
SMARCA4-204ENST00000444061 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
SMARCA4-204ENST00000444061 POM121L12Q8N7R1 296 aa9.9□□□□□ -0.82
SMARCA4-204ENST00000444061 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
SMARCA4-204ENST00000444061 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
SMARCA4-204ENST00000444061 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.83
SMARCA4-204ENST00000444061 HIGD2AQ9BW72 106 aa9.9□□□□□ -0.83
SMARCA4-204ENST00000444061 H3BNG1 76 aa9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 ESRGQ1W209 222 aa9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 MAP1AP78559 2803 aaPredicted RBP9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 A8MZ25 164 aa9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 USP17L23D6RBM5 183 aa9.89□□□□□ -0.83
SMARCA4-204ENST00000444061 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 TIMM17BO60830 172 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 EGFEM1PQ0D2K5 195 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 Q8IZM0 81 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 CYSRT1A8MQ03 144 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 XGP55808 180 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
SMARCA4-204ENST00000444061 LRCOL1A6NCL2 159 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 LINC00474Q9P2X8 69 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 FRYQ5TBA9 3013 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 TRIAP1O43715 76 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 IGLV5-52A0A0A0MRZ9 124 aa9.87□□□□□ -0.83
SMARCA4-204ENST00000444061 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
SMARCA4-204ENST00000444061 FAM240AA0A1B0GVK7 77 aa9.86□□□□□ -0.83
SMARCA4-204ENST00000444061 COX7BP24311 80 aa9.86□□□□□ -0.83
SMARCA4-204ENST00000444061 LINC01556Q5JQF7 62 aa9.85□□□□□ -0.83
SMARCA4-204ENST00000444061 A8MTW9 85 aa9.84□□□□□ -0.83
SMARCA4-204ENST00000444061 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
SMARCA4-204ENST00000444061 LINC00315P59091 139 aa9.84□□□□□ -0.83
SMARCA4-204ENST00000444061 C14orf132Q9NPU4 83 aa9.84□□□□□ -0.83
SMARCA4-204ENST00000444061 NREPQ16612 68 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 REV3LO60673 3130 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 FAM236DA0A1B0GTK5 79 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 LST1O00453 97 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 FAM236CP0DP71 79 aa9.83□□□□□ -0.84
SMARCA4-204ENST00000444061 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
SMARCA4-204ENST00000444061 COX7CP15954 63 aa9.81□□□□□ -0.84
SMARCA4-204ENST00000444061 MP68P56378 58 aa9.81□□□□□ -0.84
SMARCA4-204ENST00000444061 SPTBN5Q9NRC6 3674 aaKnown RBP9.81□□□□□ -0.84
SMARCA4-204ENST00000444061 ATP5EP56381 51 aaPredicted RBP9.81□□□□□ -0.84
SMARCA4-204ENST00000444061 AMELXQ99217 191 aa9.81□□□□□ -0.84
SMARCA4-204ENST00000444061 UPK3BQ9BT76 320 aa9.8□□□□□ -0.84
SMARCA4-204ENST00000444061 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
SMARCA4-204ENST00000444061 CCDC179H3BU77 68 aa9.8□□□□□ -0.84
SMARCA4-204ENST00000444061 COX17Q14061 63 aa9.8□□□□□ -0.84
SMARCA4-204ENST00000444061 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 COX6A2Q02221 97 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 M0R378 163 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
SMARCA4-204ENST00000444061 NDUFC1O43677 76 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 TM2D3Q9BRN9 247 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 C6orf223Q8N319 242 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 ATMQ13315 3056 aa9.78□□□□□ -0.84
SMARCA4-204ENST00000444061 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.84
SMARCA4-204ENST00000444061 M0QXV9 152 aa9.77□□□□□ -0.85
SMARCA4-204ENST00000444061 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
SMARCA4-204ENST00000444061 LINC00588Q9Y4M8 146 aa9.77□□□□□ -0.85
SMARCA4-204ENST00000444061 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
SMARCA4-204ENST00000444061 SVIPQ8NHG7 77 aa9.76□□□□□ -0.85
SMARCA4-204ENST00000444061 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
SMARCA4-204ENST00000444061 Q9UF83 564 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms