RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 CCL3L1P16619 93 aa3.97□□□□□ -1.77
ALMS1-IT1-201ENST00000441587 ZNRD1Q9P1U0 126 aa3.97□□□□□ -1.77
ALMS1-IT1-201ENST00000441587 KAAG1Q9UBP8 84 aa3.97□□□□□ -1.77
ALMS1-IT1-201ENST00000441587 ABCA4P78363 2273 aa3.96□□□□□ -1.77
ALMS1-IT1-201ENST00000441587 NBASA2RRP1 2371 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 A0A087WVE0 104 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 A8MWP4 228 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 DNAL4O96015 105 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TRGV3P03979 118 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 BAALC-AS2P0C853 105 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 RPL28P46779 137 aaKnown RBP3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 Q8N814 137 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 NAV3Q8IVL0 2385 aa3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 SMG1Q96Q15 3661 aaKnown RBP3.96□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGIPA6NJ69 53 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 E7EUB6 86 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 PRB4P10163 310 aaPredicted RBP3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 KRTAP1-1Q07627 177 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 NDUFA4L2Q9NRX3 87 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 MALRD1Q5VYJ5 2156 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 PLXNB1O43157 2135 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 DCHS1Q96JQ0 3298 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 MSMBP08118 114 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C20orf203Q8NBC4 194 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TMEM167AQ8TBQ9 72 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGF2RP11717 2491 aa3.95□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TRBV10-3A0A0K0K1G6 114 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 F8WEM9 126 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 M0R1W7 72 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGHV1-8P0DP01 117 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 NACAE9PAV3 2078 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LECT2O14960 151 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGLV1-51P01701 117 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C22orf24Q9Y442 160 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 SMAD5-AS1Q9Y6J3 95 aa3.94□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 SPTBN4Q9H254 2564 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C16orf90A8MZG2 172 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 B4DSR2 109 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 HCG22E2RYF7 251 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 BPY2O14599 106 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 WT1-ASQ06250 92 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C9orf116Q5BN46 136 aaPredicted RBP3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LINC01560Q8TB33 94 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 SPTBN1Q01082 2364 aaKnown RBP3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 PRRC2AP48634 2157 aaKnown RBP3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 ABCA1O95477 2261 aa3.93□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LRBAP50851 2863 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGHV3-73A0A0B4J1V6 119 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 CRPP02741 224 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 PDE6HQ13956 83 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C10orf55Q5SWW7 151 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TACC2O95359 2948 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 ATRXP46100 2492 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 COL6A6A6NMZ7 2263 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TRAV23DV6A0A075B6W5 121 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 A0A1W2PPR1 153 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LYNX1G3V0Z9 82 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 PPP1R17O96001 155 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGLV1-47P01700 117 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LYNX1P0DP58 116 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 VMO1Q7Z5L0 202 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 MRPL36Q9P0J6 103 aaKnown RBP3.92□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 IGHV1-3A0A0C4DH29 117 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C15orf32Q32M92 178 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 C1orf134Q5TEV5 83 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 TRAV12-3A0A0B4J271 114 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 H3BRN7 92 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 ROMO1P60602 79 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 LYZP61626 148 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 HCP5Q6MZN7 132 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 CASC2Q6XLA1 102 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 RNF5Q99942 180 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 BPESC1Q9GZL8 116 aa3.91□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 WNK2Q9Y3S1 2297 aa3.9□□□□□ -1.78
ALMS1-IT1-201ENST00000441587 ARHGAP32A7KAX9 2087 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 IGLV11-55A0A075B6I3 123 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MRGPRG-AS1Q2M3A8 158 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q8N6K4 173 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 Q8NDZ9 215 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 LINC01006Q8NI28 216 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 UNC79Q9P2D8 2635 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 NCOR2Q9Y618 2525 aa3.9□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 CHD8Q9HCK8 2581 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 APELAP0DMC3 54 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 PRB3Q04118 309 aaPredicted RBP3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 DCHS2Q6V1P9 2916 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 ZZEF1O43149 2961 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 MIFP14174 115 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
ALMS1-IT1-201ENST00000441587 INSP01308 110 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms