RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 UBE2E2Q96LR5 201 aa11.94□□□□□ -0.5
PMS1-213ENST00000441310 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
PMS1-213ENST00000441310 PRO0628Q9UI54 55 aa11.94□□□□□ -0.5
PMS1-213ENST00000441310 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
PMS1-213ENST00000441310 ENHOQ6UWT2 76 aa11.94□□□□□ -0.5
PMS1-213ENST00000441310 RPL36ALQ969Q0 106 aaKnown RBP11.94□□□□□ -0.5
PMS1-213ENST00000441310 OBSCN-AS1Q96MR7 158 aa11.93□□□□□ -0.5
PMS1-213ENST00000441310 PF4P02776 101 aa11.92□□□□□ -0.5
PMS1-213ENST00000441310 XCL1P47992 114 aa11.92□□□□□ -0.5
PMS1-213ENST00000441310 TOMM7Q9P0U1 55 aa11.92□□□□□ -0.5
PMS1-213ENST00000441310 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
PMS1-213ENST00000441310 K7EQG2 157 aa11.92□□□□□ -0.5
PMS1-213ENST00000441310 RPL35AP18077 110 aaKnown RBP11.92□□□□□ -0.5
PMS1-213ENST00000441310 NDUFC2-KCTD14E9PQ53 114 aa11.91□□□□□ -0.5
PMS1-213ENST00000441310 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
PMS1-213ENST00000441310 LINC00158P58513 81 aa11.9□□□□□ -0.5
PMS1-213ENST00000441310 TMEM89A2RUT3 159 aa11.9□□□□□ -0.5
PMS1-213ENST00000441310 DEFB131AP59861 70 aa11.9□□□□□ -0.51
PMS1-213ENST00000441310 H0YGX0 51 aa11.89□□□□□ -0.51
PMS1-213ENST00000441310 CCKP06307 115 aa11.88□□□□□ -0.51
PMS1-213ENST00000441310 ESM1Q9NQ30 184 aa11.88□□□□□ -0.51
PMS1-213ENST00000441310 DNAJC9-AS1A6NH13 148 aa11.88□□□□□ -0.51
PMS1-213ENST00000441310 SERP1Q9Y6X1 66 aa11.87□□□□□ -0.51
PMS1-213ENST00000441310 KMT2BQ9UMN6 2715 aaPredicted RBP11.87□□□□□ -0.51
PMS1-213ENST00000441310 ORMDL1Q9P0S3 153 aa11.87□□□□□ -0.51
PMS1-213ENST00000441310 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 SS18Q15532 418 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 J3QKU1 62 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 PAX4O43316 350 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 CCL18P55774 89 aa11.86□□□□□ -0.51
PMS1-213ENST00000441310 H7BZZ5 65 aa11.85□□□□□ -0.51
PMS1-213ENST00000441310 RNASE1P07998 156 aaKnown RBP11.85□□□□□ -0.51
PMS1-213ENST00000441310 S100A7L2Q5SY68 101 aa11.85□□□□□ -0.51
PMS1-213ENST00000441310 SNURFQ9Y675 71 aa11.85□□□□□ -0.51
PMS1-213ENST00000441310 DYNLRB2Q8TF09 96 aa11.84□□□□□ -0.51
PMS1-213ENST00000441310 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
PMS1-213ENST00000441310 SMR3AQ99954 134 aa11.84□□□□□ -0.51
PMS1-213ENST00000441310 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
PMS1-213ENST00000441310 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
PMS1-213ENST00000441310 RMI2Q96E14 147 aa11.81□□□□□ -0.52
PMS1-213ENST00000441310 ATP5EP2Q5VTU8 51 aa11.81□□□□□ -0.52
PMS1-213ENST00000441310 FP248Q71RG6 208 aaPredicted RBP11.81□□□□□ -0.52
PMS1-213ENST00000441310 C4orf3Q8WVX3 66 aa11.81□□□□□ -0.52
PMS1-213ENST00000441310 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
PMS1-213ENST00000441310 UBL5Q9BZL1 73 aa11.8□□□□□ -0.52
PMS1-213ENST00000441310 CDC42SE2Q9NRR3 84 aa11.8□□□□□ -0.52
PMS1-213ENST00000441310 A0A0U1RQV1 116 aa11.8□□□□□ -0.52
PMS1-213ENST00000441310 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
PMS1-213ENST00000441310 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 Q6ZTI0 123 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 LINC00474Q9P2X8 69 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
PMS1-213ENST00000441310 FAM19A3Q7Z5A8 133 aa11.78□□□□□ -0.52
PMS1-213ENST00000441310 C11orf68Q9H3H3 251 aaKnown RBP11.78□□□□□ -0.52
PMS1-213ENST00000441310 F8WEM9 126 aa11.77□□□□□ -0.52
PMS1-213ENST00000441310 BRK1Q8WUW1 75 aa11.77□□□□□ -0.52
PMS1-213ENST00000441310 DEFB114Q30KQ6 69 aa11.77□□□□□ -0.53
PMS1-213ENST00000441310 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.53
PMS1-213ENST00000441310 SMIM26A0A096LP01 95 aa11.77□□□□□ -0.53
PMS1-213ENST00000441310 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
PMS1-213ENST00000441310 TRAV7A0A075B6U4 112 aa11.76□□□□□ -0.53
PMS1-213ENST00000441310 JMJD7-PLA2G4BH0Y9G9 81 aa11.76□□□□□ -0.53
PMS1-213ENST00000441310 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
PMS1-213ENST00000441310 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
PMS1-213ENST00000441310 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
PMS1-213ENST00000441310 CCL24O00175 119 aa11.75□□□□□ -0.53
PMS1-213ENST00000441310 UBE2L6O14933 153 aa11.75□□□□□ -0.53
PMS1-213ENST00000441310 F8WDY8 70 aa11.74□□□□□ -0.53
PMS1-213ENST00000441310 LINC01006Q8NI28 216 aa11.74□□□□□ -0.53
PMS1-213ENST00000441310 HAMPP81172 84 aa11.73□□□□□ -0.53
PMS1-213ENST00000441310 TRGV1A0A0A0MS02 117 aa11.73□□□□□ -0.53
PMS1-213ENST00000441310 TRBV6-4A0A1B0GX49 114 aa11.72□□□□□ -0.53
PMS1-213ENST00000441310 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
PMS1-213ENST00000441310 NBEAL2Q6ZNJ1 2754 aa11.71□□□□□ -0.53
PMS1-213ENST00000441310 TRBV7-6A0A0J9YX20 115 aa11.71□□□□□ -0.54
PMS1-213ENST00000441310 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.54
PMS1-213ENST00000441310 KLKP1Q107X0 134 aa11.71□□□□□ -0.54
PMS1-213ENST00000441310 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.54
PMS1-213ENST00000441310 Q8N814 137 aa11.71□□□□□ -0.54
PMS1-213ENST00000441310 TMEM256-PLSCR3K7ERE1 68 aa11.7□□□□□ -0.54
PMS1-213ENST00000441310 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
PMS1-213ENST00000441310 ATRQ13535 2644 aa11.7□□□□□ -0.54
PMS1-213ENST00000441310 VWFP04275 2813 aa11.69□□□□□ -0.54
PMS1-213ENST00000441310 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
PMS1-213ENST00000441310 ANK3Q12955 4377 aaKnown RBP11.69□□□□□ -0.54
PMS1-213ENST00000441310 K7EQD1 137 aa11.68□□□□□ -0.54
PMS1-213ENST00000441310 M0R2N4 97 aa11.68□□□□□ -0.54
PMS1-213ENST00000441310 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
PMS1-213ENST00000441310 LINC01547P58512 204 aaPredicted RBP11.67□□□□□ -0.54
PMS1-213ENST00000441310 STHQ8IWL8 128 aa11.67□□□□□ -0.54
PMS1-213ENST00000441310 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
PMS1-213ENST00000441310 HIVEP1P15822 2718 aa11.66□□□□□ -0.54
PMS1-213ENST00000441310 LY6G6DO95868 133 aa11.65□□□□□ -0.54
PMS1-213ENST00000441310 V9GYY9 64 aa11.65□□□□□ -0.54
PMS1-213ENST00000441310 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
PMS1-213ENST00000441310 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms