RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 HIST1H1DP16402 221 aaKnown RBP1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 GNG2P59768 71 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 RPS25P62851 125 aaKnown RBP1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 CCDC58Q4VC31 144 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 FAM74A4Q5TZK3 123 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 C12orf73Q69YU5 71 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 XAF1Q6GPH4 301 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 SLC51BQ86UW2 128 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 COMMD7Q86VX2 200 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 COA5Q86WW8 74 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 BPIFA4PQ86YQ2 179 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 DNAJC9Q8WXX5 260 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 IMMP2LQ96T52 175 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRGV9Q99603 122 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 IMUPQ9GZP8 106 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 AGPAT4-IT1Q9H0P7 198 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 EFCAB1Q9HAE3 211 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 FKBP14Q9NWM8 211 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 OR5AC2Q9NZP5 309 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 COMMD3Q9UBI1 195 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 PAIP2BQ9ULR5 123 aaKnown RBP1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRBV7-3A0A075B6L6 115 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 A8MWV9 139 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 H3BT86 120 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 COX7A2LO14548 114 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 SSNA1O43805 119 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 BCE1O60756 84 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 IL5P05113 134 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 SPCS3P61009 180 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 RPL37P61927 97 aaKnown RBP1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 AKR1C1Q04828 323 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 TMEM97Q5BJF2 176 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 LPCAT3Q6P1A2 487 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 LYZL1Q6UWQ5 148 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 AQP10Q96PS8 301 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 MAP1LC3AQ9H492 121 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 TIMM9Q9Y5J7 89 aa1.07□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRBV10-1A0A0K0K1A3 114 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 M0R3E3 92 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 PPBPP02775 128 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 CSN1S1P47710 185 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 AQP4P55087 323 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 MLLT11Q13015 90 aaPredicted RBP1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 WHAMMP3Q1A5X7 153 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 NMSQ5H8A3 153 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 NUP35Q8NFH5 326 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 DERL1Q9BUN8 251 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 VCX3BQ9H321 246 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 ANAPC10Q9UM13 185 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 PRELID1Q9Y255 219 aa1.06□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRAV21A0A0B4J279 112 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGHV1-24A0A0C4DH33 117 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 HMSDA8MTL9 139 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 M0R036 132 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 EDF1O60869 148 aaKnown RBP1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 CST7O76096 145 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 S100A4P26447 101 aaKnown RBP1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 DDTP30046 118 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 RPL12P30050 165 aaKnown RBP1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 Q6AWC8 147 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 OR5A1Q8NGJ0 315 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 ATG5Q9H1Y0 275 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 NAA60Q9H7X0 242 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 SAR1AQ9NR31 198 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 NAT8Q9UHE5 227 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 U3KQ87 197 aa1.05□□□□□ -2.24
HMGB3P12-201ENST00000438745 TRBV6-1A0A0K0K1D8 114 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 PLA2G10O15496 165 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 TCRAP04437 139 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 MYL12AP19105 171 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 RAB14P61106 215 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 RPS29P62273 56 aaKnown RBP1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 ZNF56Q15929 161 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 IAH1Q2TAA2 248 aaPredicted RBP1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 C1orf195Q5TG92 126 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 ATP11AUNQ6ZP68 121 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 CYP2G1PQ6ZSU1 146 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 LINC00305Q7Z4B0 112 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 CANT1Q8WVQ1 401 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 BTF3L4Q96K17 158 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 SCN3BQ9NY72 215 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 IL36BQ9NZH7 164 aa1.04□□□□□ -2.24
HMGB3P12-201ENST00000438745 F6UZH7 168 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 H3BQ15 152 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 H7C2G1 150 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 CCL25O15444 150 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGLC2P0DOY2 106 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 MAGOHP61326 146 aaKnown RBP1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 IQCJQ1A5X6 159 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 Q5VV11 94 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 EXOC3-AS1Q8N2X6 119 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 PTH2Q96A98 100 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 DIRAS2Q96HU8 199 aa1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 NAA38Q9BRA0 125 aaKnown RBP1.03□□□□□ -2.24
HMGB3P12-201ENST00000438745 CCDC32Q9BV29 185 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms