RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
TNFRSF1A-203ENST00000437813 HERVK_113P63121 156 aa8.58□□□□□ -1.04
TNFRSF1A-203ENST00000437813 UBE2BP63146 152 aa8.58□□□□□ -1.04
TNFRSF1A-203ENST00000437813 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
TNFRSF1A-203ENST00000437813 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 ZNF861PO60384 105 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 LINC00469Q8N7U9 141 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 ALKBH7Q9BT30 221 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 TOMM7Q9P0U1 55 aa8.57□□□□□ -1.04
TNFRSF1A-203ENST00000437813 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 F8VRH5 84 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 PRSS2P07478 247 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 CKS1BP61024 79 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 SEC11AP67812 179 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-203ENST00000437813 PAPPA-AS1Q5QFB9 102 aa8.55□□□□□ -1.04
TNFRSF1A-203ENST00000437813 ERASQ7Z444 233 aa8.55□□□□□ -1.04
TNFRSF1A-203ENST00000437813 CTDSP1Q9GZU7 261 aa8.55□□□□□ -1.04
TNFRSF1A-203ENST00000437813 NUPR1O60356 82 aa8.54□□□□□ -1.04
TNFRSF1A-203ENST00000437813 RPL13AP40429 203 aaKnown RBP8.54□□□□□ -1.04
TNFRSF1A-203ENST00000437813 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
TNFRSF1A-203ENST00000437813 CLLU1Q5K131 121 aa8.54□□□□□ -1.04
TNFRSF1A-203ENST00000437813 TRAV9-1A0A075B6T8 112 aa8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 G0S2P27469 103 aa8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 CXCL5P42830 114 aa8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 MRPL55Q7Z7F7 128 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
TNFRSF1A-203ENST00000437813 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
TNFRSF1A-203ENST00000437813 A0A087X002 238 aa8.51□□□□□ -1.05
TNFRSF1A-203ENST00000437813 LBHQ53QV2 105 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF1A-203ENST00000437813 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
TNFRSF1A-203ENST00000437813 KRTAP13-1Q8IUC0 172 aa8.51□□□□□ -1.05
TNFRSF1A-203ENST00000437813 RAB14P61106 215 aa8.5□□□□□ -1.05
TNFRSF1A-203ENST00000437813 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
TNFRSF1A-203ENST00000437813 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
TNFRSF1A-203ENST00000437813 TMEM218A2RU14 115 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 BCE1O60756 84 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 COX7B2Q8TF08 81 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 GNB1LQ9BYB4 327 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 MUC2Q02817 5179 aa8.49□□□□□ -1.05
TNFRSF1A-203ENST00000437813 IFITM2Q01629 132 aa8.48□□□□□ -1.05
TNFRSF1A-203ENST00000437813 UQCC3Q6UW78 93 aa8.48□□□□□ -1.05
TNFRSF1A-203ENST00000437813 A0A096LNJ9 63 aa8.47□□□□□ -1.05
TNFRSF1A-203ENST00000437813 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
TNFRSF1A-203ENST00000437813 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
TNFRSF1A-203ENST00000437813 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
TNFRSF1A-203ENST00000437813 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
TNFRSF1A-203ENST00000437813 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
TNFRSF1A-203ENST00000437813 PMVKQ15126 192 aa8.45□□□□□ -1.06
TNFRSF1A-203ENST00000437813 PRR4Q16378 134 aa8.45□□□□□ -1.06
TNFRSF1A-203ENST00000437813 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
TNFRSF1A-203ENST00000437813 SEC11CQ9BY50 192 aa8.45□□□□□ -1.06
TNFRSF1A-203ENST00000437813 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
TNFRSF1A-203ENST00000437813 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
TNFRSF1A-203ENST00000437813 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
TNFRSF1A-203ENST00000437813 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
TNFRSF1A-203ENST00000437813 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
TNFRSF1A-203ENST00000437813 CRYGAP11844 174 aa8.42□□□□□ -1.06
TNFRSF1A-203ENST00000437813 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
TNFRSF1A-203ENST00000437813 SCO1O75880 301 aa8.41□□□□□ -1.06
TNFRSF1A-203ENST00000437813 VPREB1P12018 145 aa8.41□□□□□ -1.06
TNFRSF1A-203ENST00000437813 RAB5BP61020 215 aa8.41□□□□□ -1.06
TNFRSF1A-203ENST00000437813 COX19Q49B96 90 aa8.41□□□□□ -1.06
TNFRSF1A-203ENST00000437813 Q8NDZ9 215 aa8.41□□□□□ -1.06
TNFRSF1A-203ENST00000437813 TSPAN13O95857 204 aa8.4□□□□□ -1.06
TNFRSF1A-203ENST00000437813 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF1A-203ENST00000437813 S100PP25815 95 aa8.39□□□□□ -1.07
TNFRSF1A-203ENST00000437813 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
TNFRSF1A-203ENST00000437813 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
TNFRSF1A-203ENST00000437813 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
TNFRSF1A-203ENST00000437813 H3BRM9 83 aa8.38□□□□□ -1.07
TNFRSF1A-203ENST00000437813 ATP5LO75964 103 aa8.38□□□□□ -1.07
TNFRSF1A-203ENST00000437813 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
TNFRSF1A-203ENST00000437813 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
TNFRSF1A-203ENST00000437813 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
TNFRSF1A-203ENST00000437813 NKAPP1Q8N9T2 125 aa8.37□□□□□ -1.07
TNFRSF1A-203ENST00000437813 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 RHEBQ15382 184 aa8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 SMCO4Q9NRQ5 59 aa8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
TNFRSF1A-203ENST00000437813 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 M0R378 163 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 PFN2P35080 140 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 UBE2AP49459 152 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 COX17Q14061 63 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
TNFRSF1A-203ENST00000437813 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
TNFRSF1A-203ENST00000437813 LINC00614P0C842 121 aa8.34□□□□□ -1.07
TNFRSF1A-203ENST00000437813 PRLHP81277 87 aa8.34□□□□□ -1.07
TNFRSF1A-203ENST00000437813 COMMD7Q86VX2 200 aa8.34□□□□□ -1.07
TNFRSF1A-203ENST00000437813 HBDP02042 147 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms