RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 C16orf90A8MZG2 172 aa7.15□□□□□ -1.26
CHD4-202ENST00000430771 HSBP1L1C9JCN9 74 aa7.15□□□□□ -1.26
CHD4-202ENST00000430771 LEPROTO15243 131 aa7.15□□□□□ -1.26
CHD4-202ENST00000430771 Q6ZRU5 148 aa7.15□□□□□ -1.26
CHD4-202ENST00000430771 E9PLD3 99 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
CHD4-202ENST00000430771 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 C2orf82Q6UX34 121 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 C9orf163Q8N9P6 203 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 PKD1P98161 4303 aa7.14□□□□□ -1.27
CHD4-202ENST00000430771 J3QQQ9 107 aa7.13□□□□□ -1.27
CHD4-202ENST00000430771 SLPIP03973 132 aa7.13□□□□□ -1.27
CHD4-202ENST00000430771 GCSHP23434 173 aa7.13□□□□□ -1.27
CHD4-202ENST00000430771 NMUP48645 174 aa7.13□□□□□ -1.27
CHD4-202ENST00000430771 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
CHD4-202ENST00000430771 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
CHD4-202ENST00000430771 FUSP35637 526 aaKnown RBP eCLIP7.12□□□□□ -1.27
CHD4-202ENST00000430771 JOSD1Q15040 202 aaPredicted RBP7.12□□□□□ -1.27
CHD4-202ENST00000430771 UNQ6190/PRO20217Q6UXQ8 127 aa7.12□□□□□ -1.27
CHD4-202ENST00000430771 STPG4Q8N801 248 aa7.12□□□□□ -1.27
CHD4-202ENST00000430771 NDUFA12Q9UI09 145 aa7.12□□□□□ -1.27
CHD4-202ENST00000430771 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
CHD4-202ENST00000430771 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
CHD4-202ENST00000430771 HERV-K104P63124 156 aa7.11□□□□□ -1.27
CHD4-202ENST00000430771 RPL18AQ02543 176 aaKnown RBP7.11□□□□□ -1.27
CHD4-202ENST00000430771 C10orf25Q5T742 122 aa7.11□□□□□ -1.27
CHD4-202ENST00000430771 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
CHD4-202ENST00000430771 ZNF625Q96I27 306 aaPredicted RBP7.1□□□□□ -1.27
CHD4-202ENST00000430771 DYNC1H1Q14204 4646 aaKnown RBP7.1□□□□□ -1.27
CHD4-202ENST00000430771 LINC00587B1AMM8 73 aa7.09□□□□□ -1.27
CHD4-202ENST00000430771 LINC01620Q4KN68 170 aa7.09□□□□□ -1.27
CHD4-202ENST00000430771 ANKRD39Q53RE8 183 aa7.09□□□□□ -1.27
CHD4-202ENST00000430771 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
CHD4-202ENST00000430771 ERG28Q9UKR5 140 aa7.09□□□□□ -1.27
CHD4-202ENST00000430771 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
CHD4-202ENST00000430771 PKHD1P08F94 4074 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 ZNF815PA8K554 130 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 NDUFC2-KCTD14E9PQ53 114 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 COX17Q14061 63 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 VAMP8Q9BV40 100 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 LINC00474Q9P2X8 69 aa7.08□□□□□ -1.28
CHD4-202ENST00000430771 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 PTTG1IPP53801 180 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 KRTAP10-1P60331 282 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 GAGE2BQ13066 116 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 MAJINQ3KP22 176 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
CHD4-202ENST00000430771 PYY3Q5JQD4 70 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
CHD4-202ENST00000430771 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
CHD4-202ENST00000430771 A0A096LNI7 61 aa7.06□□□□□ -1.28
CHD4-202ENST00000430771 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
CHD4-202ENST00000430771 LRP1BQ9NZR2 4599 aa7.06□□□□□ -1.28
CHD4-202ENST00000430771 PFN2P35080 140 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 CIRBPQ14011 172 aaKnown RBP7.05□□□□□ -1.28
CHD4-202ENST00000430771 GAGE2EQ4V326 116 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 Q6ZRP5 223 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 Q6ZSA8 131 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 GAGE2DQ9UEU5 116 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
CHD4-202ENST00000430771 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 SMIM6P0DI80 62 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 LINC00158P58513 81 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 S100A12P80511 92 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
CHD4-202ENST00000430771 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
CHD4-202ENST00000430771 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
CHD4-202ENST00000430771 PCP2Q8IVA1 136 aa7.03□□□□□ -1.28
CHD4-202ENST00000430771 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
CHD4-202ENST00000430771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.03□□□□□ -1.28
CHD4-202ENST00000430771 A0A0U1RRA0 63 aa7.02□□□□□ -1.29
CHD4-202ENST00000430771 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
CHD4-202ENST00000430771 TIMM17BO60830 172 aa7.02□□□□□ -1.29
CHD4-202ENST00000430771 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 COX8AP10176 69 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 MIR7-3HGQ8N6C7 128 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 XAGE1AQ9HD64 81 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 BIRC6Q9NR09 4857 aa7.01□□□□□ -1.29
CHD4-202ENST00000430771 CDK2AP2O75956 126 aa7□□□□□ -1.29
CHD4-202ENST00000430771 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
CHD4-202ENST00000430771 SCXQ7RTU7 201 aa7□□□□□ -1.29
CHD4-202ENST00000430771 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
CHD4-202ENST00000430771 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
CHD4-202ENST00000430771 A0A087WYN8 130 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 PANO1I0J062 215 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 DLEU1O43261 78 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 BOD1L2Q8IYS8 172 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 COPS9Q8WXC6 57 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
CHD4-202ENST00000430771 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
CHD4-202ENST00000430771 SLC25A34Q6PIV7 304 aa6.98□□□□□ -1.29
CHD4-202ENST00000430771 Q6ZVH6 145 aa6.98□□□□□ -1.29
CHD4-202ENST00000430771 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
CHD4-202ENST00000430771 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
CHD4-202ENST00000430771 DAND5Q8N907 189 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms