RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ALKBH7Q9BT30 221 aaPredicted RBP10.23□□□□□ -0.77
CPSF4-203ENST00000430038 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
CPSF4-203ENST00000430038 CKS1BP61024 79 aa10.22□□□□□ -0.77
CPSF4-203ENST00000430038 TIMM17AQ99595 171 aa10.22□□□□□ -0.77
CPSF4-203ENST00000430038 PRSS2P07478 247 aa10.21□□□□□ -0.77
CPSF4-203ENST00000430038 HERVK_113P63121 156 aa10.21□□□□□ -0.77
CPSF4-203ENST00000430038 TMEM218A2RU14 115 aa10.2□□□□□ -0.78
CPSF4-203ENST00000430038 SMIM1B2RUZ4 78 aa10.2□□□□□ -0.78
CPSF4-203ENST00000430038 LINC01546A6NGU7 62 aa10.19□□□□□ -0.78
CPSF4-203ENST00000430038 ERASQ7Z444 233 aa10.19□□□□□ -0.78
CPSF4-203ENST00000430038 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
CPSF4-203ENST00000430038 F8VRH5 84 aa10.18□□□□□ -0.78
CPSF4-203ENST00000430038 SCGB3A1Q96QR1 104 aa10.18□□□□□ -0.78
CPSF4-203ENST00000430038 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
CPSF4-203ENST00000430038 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
CPSF4-203ENST00000430038 ZNF861PO60384 105 aa10.17□□□□□ -0.78
CPSF4-203ENST00000430038 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
CPSF4-203ENST00000430038 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
CPSF4-203ENST00000430038 SEC11AP67812 179 aa10.15□□□□□ -0.78
CPSF4-203ENST00000430038 PAPPA-AS1Q5QFB9 102 aa10.15□□□□□ -0.78
CPSF4-203ENST00000430038 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
CPSF4-203ENST00000430038 TRAV9-1A0A075B6T8 112 aa10.14□□□□□ -0.79
CPSF4-203ENST00000430038 SPINK8P0C7L1 97 aa10.14□□□□□ -0.79
CPSF4-203ENST00000430038 UQCC3Q6UW78 93 aa10.14□□□□□ -0.79
CPSF4-203ENST00000430038 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
CPSF4-203ENST00000430038 LINC00167Q96N53 147 aa10.14□□□□□ -0.79
CPSF4-203ENST00000430038 MUC2Q02817 5179 aa10.13□□□□□ -0.79
CPSF4-203ENST00000430038 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
CPSF4-203ENST00000430038 PDZD11Q5EBL8 140 aa10.13□□□□□ -0.79
CPSF4-203ENST00000430038 MRPL55Q7Z7F7 128 aaKnown RBP10.13□□□□□ -0.79
CPSF4-203ENST00000430038 URB1-AS1Q96HZ7 61 aa10.13□□□□□ -0.79
CPSF4-203ENST00000430038 A0A087X002 238 aa10.12□□□□□ -0.79
CPSF4-203ENST00000430038 A0A096LNJ9 63 aa10.12□□□□□ -0.79
CPSF4-203ENST00000430038 G0S2P27469 103 aa10.12□□□□□ -0.79
CPSF4-203ENST00000430038 RAB5BP61020 215 aa10.12□□□□□ -0.79
CPSF4-203ENST00000430038 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
CPSF4-203ENST00000430038 LBHQ53QV2 105 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-203ENST00000430038 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
CPSF4-203ENST00000430038 GAGE10A6NGK3 116 aa10.1□□□□□ -0.79
CPSF4-203ENST00000430038 NUPR1O60356 82 aa10.1□□□□□ -0.79
CPSF4-203ENST00000430038 SCO1O75880 301 aa10.1□□□□□ -0.79
CPSF4-203ENST00000430038 CXCL5P42830 114 aa10.1□□□□□ -0.79
CPSF4-203ENST00000430038 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
CPSF4-203ENST00000430038 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
CPSF4-203ENST00000430038 PMVKQ15126 192 aa10.09□□□□□ -0.79
CPSF4-203ENST00000430038 C10orf91Q5T1B1 145 aa10.09□□□□□ -0.79
CPSF4-203ENST00000430038 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
CPSF4-203ENST00000430038 BCE1O60756 84 aa10.08□□□□□ -0.8
CPSF4-203ENST00000430038 FABP9Q0Z7S8 132 aa10.08□□□□□ -0.8
CPSF4-203ENST00000430038 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
CPSF4-203ENST00000430038 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
CPSF4-203ENST00000430038 IGLV5-37A0A075B6J1 123 aa10.06□□□□□ -0.8
CPSF4-203ENST00000430038 TSPAN13O95857 204 aa10.06□□□□□ -0.8
CPSF4-203ENST00000430038 S100PP25815 95 aa10.06□□□□□ -0.8
CPSF4-203ENST00000430038 FA2HQ7L5A8 372 aa10.06□□□□□ -0.8
CPSF4-203ENST00000430038 COMMD7Q86VX2 200 aa10.06□□□□□ -0.8
CPSF4-203ENST00000430038 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
CPSF4-203ENST00000430038 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
CPSF4-203ENST00000430038 PRR4Q16378 134 aa10.05□□□□□ -0.8
CPSF4-203ENST00000430038 Q8NDZ9 215 aa10.05□□□□□ -0.8
CPSF4-203ENST00000430038 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-203ENST00000430038 PMCHL1Q16048 86 aa10.04□□□□□ -0.8
CPSF4-203ENST00000430038 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
CPSF4-203ENST00000430038 RPS10P5Q9NQ39 176 aa10.04□□□□□ -0.8
CPSF4-203ENST00000430038 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
CPSF4-203ENST00000430038 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
CPSF4-203ENST00000430038 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
CPSF4-203ENST00000430038 PFN2P35080 140 aa10.02□□□□□ -0.81
CPSF4-203ENST00000430038 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
CPSF4-203ENST00000430038 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
CPSF4-203ENST00000430038 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
CPSF4-203ENST00000430038 NDUFA6P56556 154 aa10.01□□□□□ -0.81
CPSF4-203ENST00000430038 COX19Q49B96 90 aa10.01□□□□□ -0.81
CPSF4-203ENST00000430038 LINC00614P0C842 121 aa10□□□□□ -0.81
CPSF4-203ENST00000430038 VPREB1P12018 145 aa10□□□□□ -0.81
CPSF4-203ENST00000430038 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
CPSF4-203ENST00000430038 ATP5LO75964 103 aa9.99□□□□□ -0.81
CPSF4-203ENST00000430038 RHEBQ15382 184 aa9.99□□□□□ -0.81
CPSF4-203ENST00000430038 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
CPSF4-203ENST00000430038 SND1-IT1Q9HBX3 110 aa9.99□□□□□ -0.81
CPSF4-203ENST00000430038 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 H3BRM9 83 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 CRYGAP11844 174 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 NKAPP1Q8N9T2 125 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
CPSF4-203ENST00000430038 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
CPSF4-203ENST00000430038 PRLHP81277 87 aa9.96□□□□□ -0.82
CPSF4-203ENST00000430038 HBDP02042 147 aa9.95□□□□□ -0.82
CPSF4-203ENST00000430038 UBE2AP49459 152 aa9.95□□□□□ -0.82
CPSF4-203ENST00000430038 M0R378 163 aa9.94□□□□□ -0.82
CPSF4-203ENST00000430038 BAGE3Q86Y29 109 aa9.94□□□□□ -0.82
CPSF4-203ENST00000430038 TMEM126AQ9H061 195 aa9.94□□□□□ -0.82
CPSF4-203ENST00000430038 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
CPSF4-203ENST00000430038 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
CPSF4-203ENST00000430038 YPEL4Q96NS1 127 aa9.92□□□□□ -0.82
CPSF4-203ENST00000430038 COX17Q14061 63 aa9.91□□□□□ -0.82
CPSF4-203ENST00000430038 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
CPSF4-203ENST00000430038 APOC3P02656 99 aa9.9□□□□□ -0.82
CPSF4-203ENST00000430038 FAM229BQ4G0N7 80 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms