RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 KRTAP13-2Q52LG2 175 aa10.67□□□□□ -0.7
UPK3BP1-201ENST00000428678 C9JQL5 133 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 F8VRH5 84 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 LINC00304Q8N9R0 145 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 LINC00167Q96N53 147 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 AMELXQ99217 191 aa10.66□□□□□ -0.7
UPK3BP1-201ENST00000428678 GAGE10A6NGK3 116 aa10.65□□□□□ -0.7
UPK3BP1-201ENST00000428678 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
UPK3BP1-201ENST00000428678 UBE2AP49459 152 aa10.64□□□□□ -0.71
UPK3BP1-201ENST00000428678 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
UPK3BP1-201ENST00000428678 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
UPK3BP1-201ENST00000428678 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
UPK3BP1-201ENST00000428678 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 HERVK_113P63121 156 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 FAM19A3Q7Z5A8 133 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
UPK3BP1-201ENST00000428678 CXCL5P42830 114 aa10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 SEC11AP67812 179 aa10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 FAM229BQ4G0N7 80 aa10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 Q8N8P6 123 aa10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 GEMIN7Q9H840 131 aaKnown RBP10.61□□□□□ -0.71
UPK3BP1-201ENST00000428678 IGIPA6NJ69 53 aa10.6□□□□□ -0.71
UPK3BP1-201ENST00000428678 NPSP0C0P6 89 aa10.6□□□□□ -0.71
UPK3BP1-201ENST00000428678 PEA15Q15121 130 aa10.6□□□□□ -0.71
UPK3BP1-201ENST00000428678 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
UPK3BP1-201ENST00000428678 KRTAP13-1Q8IUC0 172 aa10.6□□□□□ -0.71
UPK3BP1-201ENST00000428678 hCG_2014768A0A024R1R8 64 aa10.59□□□□□ -0.71
UPK3BP1-201ENST00000428678 IGKV2D-26A0A0A0MRZ7 120 aa10.59□□□□□ -0.71
UPK3BP1-201ENST00000428678 NKAPP1Q8N9T2 125 aa10.58□□□□□ -0.72
UPK3BP1-201ENST00000428678 PNRC1Q12796 327 aaPredicted RBP10.57□□□□□ -0.72
UPK3BP1-201ENST00000428678 PAPPA-AS1Q5QFB9 102 aa10.57□□□□□ -0.72
UPK3BP1-201ENST00000428678 IGLV5-37A0A075B6J1 123 aa10.56□□□□□ -0.72
UPK3BP1-201ENST00000428678 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
UPK3BP1-201ENST00000428678 SMIM1B2RUZ4 78 aa10.55□□□□□ -0.72
UPK3BP1-201ENST00000428678 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
UPK3BP1-201ENST00000428678 RAB5BP61020 215 aa10.55□□□□□ -0.72
UPK3BP1-201ENST00000428678 COX7B2Q8TF08 81 aa10.55□□□□□ -0.72
UPK3BP1-201ENST00000428678 K7EMI3 77 aa10.53□□□□□ -0.72
UPK3BP1-201ENST00000428678 SCO1O75880 301 aa10.53□□□□□ -0.72
UPK3BP1-201ENST00000428678 PRLHP81277 87 aa10.53□□□□□ -0.72
UPK3BP1-201ENST00000428678 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
UPK3BP1-201ENST00000428678 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
UPK3BP1-201ENST00000428678 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
UPK3BP1-201ENST00000428678 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.73
UPK3BP1-201ENST00000428678 CTAG1AP78358 180 aa10.51□□□□□ -0.73
UPK3BP1-201ENST00000428678 G0S2P27469 103 aa10.5□□□□□ -0.73
UPK3BP1-201ENST00000428678 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
UPK3BP1-201ENST00000428678 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
UPK3BP1-201ENST00000428678 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
UPK3BP1-201ENST00000428678 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
UPK3BP1-201ENST00000428678 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
UPK3BP1-201ENST00000428678 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
UPK3BP1-201ENST00000428678 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
UPK3BP1-201ENST00000428678 ERASQ7Z444 233 aa10.47□□□□□ -0.73
UPK3BP1-201ENST00000428678 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
UPK3BP1-201ENST00000428678 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.73
UPK3BP1-201ENST00000428678 ATP5LO75964 103 aa10.45□□□□□ -0.74
UPK3BP1-201ENST00000428678 PFN2P35080 140 aa10.45□□□□□ -0.74
UPK3BP1-201ENST00000428678 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
UPK3BP1-201ENST00000428678 ADCYAP1P18509 176 aa10.44□□□□□ -0.74
UPK3BP1-201ENST00000428678 LINC00337Q8N6G1 96 aa10.44□□□□□ -0.74
UPK3BP1-201ENST00000428678 MT-ND4LP03901 98 aa10.43□□□□□ -0.74
UPK3BP1-201ENST00000428678 LINC01547P58512 204 aaPredicted RBP10.43□□□□□ -0.74
UPK3BP1-201ENST00000428678 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
UPK3BP1-201ENST00000428678 CBLN2Q8IUK8 224 aa10.43□□□□□ -0.74
UPK3BP1-201ENST00000428678 M0R378 163 aa10.42□□□□□ -0.74
UPK3BP1-201ENST00000428678 VPREB1P12018 145 aa10.42□□□□□ -0.74
UPK3BP1-201ENST00000428678 FP248Q71RG6 208 aaPredicted RBP10.42□□□□□ -0.74
UPK3BP1-201ENST00000428678 ANAPC16Q96DE5 110 aa10.42□□□□□ -0.74
UPK3BP1-201ENST00000428678 HIGD2AQ9BW72 106 aa10.41□□□□□ -0.74
UPK3BP1-201ENST00000428678 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
UPK3BP1-201ENST00000428678 RPL24P83731 157 aaKnown RBP10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
UPK3BP1-201ENST00000428678 H3BRM9 83 aa10.39□□□□□ -0.75
UPK3BP1-201ENST00000428678 RAB14P61106 215 aa10.38□□□□□ -0.75
UPK3BP1-201ENST00000428678 KRTAP13-3Q3SY46 172 aa10.38□□□□□ -0.75
UPK3BP1-201ENST00000428678 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
UPK3BP1-201ENST00000428678 LCE2DQ5TA82 110 aaPredicted RBP10.38□□□□□ -0.75
UPK3BP1-201ENST00000428678 FSIP2Q5CZC0 6907 aa10.37□□□□□ -0.75
UPK3BP1-201ENST00000428678 PMVKQ15126 192 aa10.37□□□□□ -0.75
UPK3BP1-201ENST00000428678 ERG28Q9UKR5 140 aa10.37□□□□□ -0.75
UPK3BP1-201ENST00000428678 LINC01549A6NIU2 74 aa10.36□□□□□ -0.75
UPK3BP1-201ENST00000428678 SPRR4Q96PI1 79 aa10.36□□□□□ -0.75
UPK3BP1-201ENST00000428678 Q8NDZ9 215 aa10.35□□□□□ -0.75
UPK3BP1-201ENST00000428678 IGLV5-39A0A0G2JS06 123 aa10.34□□□□□ -0.75
UPK3BP1-201ENST00000428678 DAND5Q8N907 189 aa10.34□□□□□ -0.75
UPK3BP1-201ENST00000428678 Q8NBF4 154 aa10.34□□□□□ -0.75
UPK3BP1-201ENST00000428678 ZNF625Q96I27 306 aaPredicted RBP10.34□□□□□ -0.75
UPK3BP1-201ENST00000428678 KRTAP4-1Q9BYQ7 146 aa10.34□□□□□ -0.75
UPK3BP1-201ENST00000428678 CRCT1Q9UGL9 99 aa10.33□□□□□ -0.76
UPK3BP1-201ENST00000428678 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
UPK3BP1-201ENST00000428678 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms