RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MAPKAPK5-AS1Q8N8E1 139 aa4.13□□□□□ -1.75
HERC4-206ENST00000427635 C2orf16Q68DN1 1984 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 IGKV2D-30A0A075B6S6 120 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 SBSPONQ8IVN8 264 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 SMIM11BQ8TCY0 68 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 FAM19A4Q96LR4 140 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 CEP295Q9C0D2 2601 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 ANKHD1Q8IWZ3 2542 aaKnown RBP4.12□□□□□ -1.75
HERC4-206ENST00000427635 SETXQ7Z333 2677 aaKnown RBP4.12□□□□□ -1.75
HERC4-206ENST00000427635 A8MUN3 132 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 TSHBP01222 138 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 PRLHP81277 87 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 PLA2G2DQ9UNK4 145 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 EP400Q96L91 3159 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 ZNF106Q9H2Y7 1883 aaKnown RBP4.12□□□□□ -1.75
HERC4-206ENST00000427635 RTL8CO15255 209 aa4.12□□□□□ -1.75
HERC4-206ENST00000427635 Q6ZRP5 223 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 ABCA1O95477 2261 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 Q6ZS46 218 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 Q8N6K4 173 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 CDC42SE2Q9NRR3 84 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
HERC4-206ENST00000427635 C22orf34Q6ZV56 151 aa4.1□□□□□ -1.75
HERC4-206ENST00000427635 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
HERC4-206ENST00000427635 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
HERC4-206ENST00000427635 HCG22E2RYF7 251 aa4.1□□□□□ -1.75
HERC4-206ENST00000427635 FHL2Q14192 279 aa4.1□□□□□ -1.75
HERC4-206ENST00000427635 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 H0Y9P7 68 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 PSPHP1O15172 72 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 C9orf116Q5BN46 136 aaPredicted RBP4.09□□□□□ -1.75
HERC4-206ENST00000427635 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 KLLNB2CW77 178 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 PCOTHQ58A44 107 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 TTTY13Q9BZ97 58 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 PLXNB3Q9ULL4 1909 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 DOCK10Q96BY6 2186 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
HERC4-206ENST00000427635 LTBP2Q14767 1821 aa4.09□□□□□ -1.75
HERC4-206ENST00000427635 ZNF407Q9C0G0 2248 aa4.09□□□□□ -1.76
HERC4-206ENST00000427635 SMCR5Q8TEV8 140 aa4.09□□□□□ -1.76
HERC4-206ENST00000427635 WNK2Q9Y3S1 2297 aa4.09□□□□□ -1.76
HERC4-206ENST00000427635 RNASE3P12724 160 aaKnown RBP4.09□□□□□ -1.76
HERC4-206ENST00000427635 ACYP2P14621 99 aa4.09□□□□□ -1.76
HERC4-206ENST00000427635 ODF3L2Q3SX64 289 aa4.09□□□□□ -1.76
HERC4-206ENST00000427635 COL5A1P20908 1838 aaPredicted RBP4.09□□□□□ -1.76
HERC4-206ENST00000427635 MOBPQ13875 183 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 MYO9AB2RTY4 2548 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 CEP192Q8TEP8 1941 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 DSCAMO60469 2012 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 DOCK11Q5JSL3 2073 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 MED13LQ71F56 2210 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 AVPP01185 164 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 KIAA0087Q14695 138 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 Q75L30 129 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 EIF4EBP1Q13541 118 aaPredicted RBP4.08□□□□□ -1.76
HERC4-206ENST00000427635 NUP210LQ5VU65 1888 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
HERC4-206ENST00000427635 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 A0A087WSZ3 146 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 BRWD1-AS2P59051 145 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 NBDYA0A0U1RRE5 68 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 LINC00313P59037 77 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 TP73-AS1Q9UF72 201 aa4.07□□□□□ -1.76
HERC4-206ENST00000427635 NOTCH3Q9UM47 2321 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 F8P00451 2351 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 Q8N814 137 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 TM2D3Q9BRN9 247 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 KIF25-AS1Q9Y6Z4 181 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 SPATA3Q8NHX4 192 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 PIEZO2Q9H5I5 2752 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 KRTAP24-1Q3LI83 254 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 NTM-AS1Q6ZSK4 140 aa4.06□□□□□ -1.76
HERC4-206ENST00000427635 PRRC2AP48634 2157 aaKnown RBP4.05□□□□□ -1.76
HERC4-206ENST00000427635 Q8NBF4 154 aa4.05□□□□□ -1.76
HERC4-206ENST00000427635 Q96NJ1 140 aa4.05□□□□□ -1.76
HERC4-206ENST00000427635 TLN1Q9Y490 2541 aaKnown RBP4.05□□□□□ -1.76
HERC4-206ENST00000427635 A0A1B0GUV1 79 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 ZNF580Q9UK33 172 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 KIAA1549LQ6ZVL6 1849 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 TRBV7-7A0A0K0K1E9 115 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 CRIP2P52943 208 aaPredicted RBP4.04□□□□□ -1.76
HERC4-206ENST00000427635 IGLV4-60A0A075B6I1 120 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 LINC00315P59091 139 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 PRR9Q5T870 116 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 DEFB116Q30KQ4 102 aa4.04□□□□□ -1.76
HERC4-206ENST00000427635 RAI1Q7Z5J4 1906 aaPredicted RBP4.03□□□□□ -1.76
HERC4-206ENST00000427635 TET2Q6N021 2002 aaPredicted RBP4.03□□□□□ -1.76
HERC4-206ENST00000427635 CRIP1P50238 77 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 TP53AIP1Q9HCN2 124 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 A0A1B0GU69 56 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 ARHGAP21Q5T5U3 1957 aa4.03□□□□□ -1.76
HERC4-206ENST00000427635 MED12Q93074 2177 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms