RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 VPS13CQ709C8 3753 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 DOPEY1Q5JWR5 2465 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.45□□□□□ -1.86
LINC00458-202ENST00000427299 TRAV8-3A0A0A6YYJ7 113 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 IGKV2-29A2NJV5 120 aaPredicted RBP3.45□□□□□ -1.86
LINC00458-202ENST00000427299 KNCNA6PVL3 124 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 DNAL4O96015 105 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 TRACP01848 142 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1CP0DJD4 496 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 DEFB121Q5J5C9 76 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 C16orf74Q96GX8 76 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 LINC01587Q99440 93 aa3.45□□□□□ -1.86
LINC00458-202ENST00000427299 PKD1L2Q7Z442 2459 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 A0A096LNT2 108 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 IGHV3-73A0A0B4J1V6 119 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 TRBV7-7A0A0K0K1E9 115 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1A1P0DJD3 496 aaKnown RBP3.44□□□□□ -1.86
LINC00458-202ENST00000427299 HTN1P15515 57 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
LINC00458-202ENST00000427299 C15orf53Q8NAA6 179 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 LINC00308Q8TCZ7 52 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 TMEM243Q9BU79 118 aa3.44□□□□□ -1.86
LINC00458-202ENST00000427299 CSPG4Q6UVK1 2322 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 RELNP78509 3460 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 TRGV1A0A0A0MS02 117 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 TEX49A0A1B0GTD5 131 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1BA6NDE4 496 aaKnown RBP3.43□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1EA6NEQ0 496 aaKnown RBP3.43□□□□□ -1.86
LINC00458-202ENST00000427299 RBMY1DP0C7P1 496 aaKnown RBP3.43□□□□□ -1.86
LINC00458-202ENST00000427299 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
LINC00458-202ENST00000427299 DAND5Q8N907 189 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 CDKN2A-AS1Q9UH64 79 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 CREBBPQ92793 2442 aa3.43□□□□□ -1.86
LINC00458-202ENST00000427299 CXCL5P42830 114 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 NPC2P61916 151 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 DEFB136Q30KP8 78 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 DEFB114Q30KQ6 69 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 C10orf99Q6UWK7 81 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 CHCHD10Q8WYQ3 142 aaPredicted RBP3.42□□□□□ -1.86
LINC00458-202ENST00000427299 CLEC2BQ92478 149 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 RETNQ9HD89 108 aa3.42□□□□□ -1.86
LINC00458-202ENST00000427299 ASH1LQ9NR48 2969 aaKnown RBP3.42□□□□□ -1.86
LINC00458-202ENST00000427299 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 H0YGX0 51 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
LINC00458-202ENST00000427299 DEFB113Q30KQ7 82 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 CEMP1Q6PRD7 247 aaPredicted RBP3.41□□□□□ -1.86
LINC00458-202ENST00000427299 COX7B2Q8TF08 81 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 ZNF625Q96I27 306 aaPredicted RBP3.41□□□□□ -1.86
LINC00458-202ENST00000427299 TMEM126AQ9H061 195 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 CDC42SE2Q9NRR3 84 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 UNC79Q9P2D8 2635 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 SORL1Q92673 2214 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
LINC00458-202ENST00000427299 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 TRAV13-1A0A0B4J241 112 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 A0A1B0GX51 115 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 ATOX1O00244 68 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 ATP5EP2Q5VTU8 51 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 MUC7Q8TAX7 377 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 XCL2Q9UBD3 114 aa3.4□□□□□ -1.87
LINC00458-202ENST00000427299 CELSR1Q9NYQ6 3014 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 TRGV4A0A0C4DH28 118 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 FAM236AA0A1B0GUQ0 79 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 FAM236BA0A1B0GV22 79 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 F5H768 121 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 SDIM1Q6ZPB5 146 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 C6orf223Q8N319 242 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 NCOR2Q9Y618 2525 aa3.39□□□□□ -1.87
LINC00458-202ENST00000427299 ITPR1Q14643 2758 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 SVEP1Q4LDE5 3571 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 H3BQ85 93 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 UQCRQO14949 82 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 LINC00694P0DN24 101 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 Q6ZTI0 123 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 C1orf158Q8N1D5 194 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 MIR7-3HGQ8N6C7 128 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 SND1-IT1Q9HBX3 110 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 NOP10Q9NPE3 64 aaKnown RBP3.38□□□□□ -1.87
LINC00458-202ENST00000427299 SS18L2Q9UHA2 77 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 CRYBG3Q68DQ2 2970 aa3.38□□□□□ -1.87
LINC00458-202ENST00000427299 TRBV6-8A0A0A6YYG3 113 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 JMJD7-PLA2G4BH0Y9G9 81 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 LY6G6DO95868 133 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 BAALC-AS2P0C853 105 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 LINC00158P58513 81 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 CXCL6P80162 114 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 COX6A2Q02221 97 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 PRR4Q16378 134 aa3.37□□□□□ -1.87
LINC00458-202ENST00000427299 Q6JHZ5 121 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms