RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 SCGB3A1Q96QR1 104 aa13.19□□□□□ -0.3
CDCP1-202ENST00000425231 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
CDCP1-202ENST00000425231 CARHSP1Q9Y2V2 147 aaKnown RBP13.19□□□□□ -0.3
CDCP1-202ENST00000425231 COX19Q49B96 90 aa13.18□□□□□ -0.3
CDCP1-202ENST00000425231 C6orf226Q5I0X4 101 aa13.18□□□□□ -0.3
CDCP1-202ENST00000425231 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
CDCP1-202ENST00000425231 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
CDCP1-202ENST00000425231 CKS1BP61024 79 aa13.16□□□□□ -0.3
CDCP1-202ENST00000425231 ODF1Q14990 250 aa13.16□□□□□ -0.3
CDCP1-202ENST00000425231 RHEBQ15382 184 aa13.16□□□□□ -0.3
CDCP1-202ENST00000425231 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
CDCP1-202ENST00000425231 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
CDCP1-202ENST00000425231 LINC01549A6NIU2 74 aa13.15□□□□□ -0.3
CDCP1-202ENST00000425231 FABP9Q0Z7S8 132 aa13.14□□□□□ -0.31
CDCP1-202ENST00000425231 IGLV7-43P04211 117 aa13.13□□□□□ -0.31
CDCP1-202ENST00000425231 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
CDCP1-202ENST00000425231 M0QXV9 152 aa13.13□□□□□ -0.31
CDCP1-202ENST00000425231 CST9LQ9H4G1 147 aa13.13□□□□□ -0.31
CDCP1-202ENST00000425231 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
CDCP1-202ENST00000425231 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
CDCP1-202ENST00000425231 F8VRH5 84 aa13.11□□□□□ -0.31
CDCP1-202ENST00000425231 FA2HQ7L5A8 372 aa13.11□□□□□ -0.31
CDCP1-202ENST00000425231 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
CDCP1-202ENST00000425231 SMCO4Q9NRQ5 59 aa13.09□□□□□ -0.31
CDCP1-202ENST00000425231 PMVKQ15126 192 aa13.08□□□□□ -0.32
CDCP1-202ENST00000425231 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
CDCP1-202ENST00000425231 CXCL5P42830 114 aa13.07□□□□□ -0.32
CDCP1-202ENST00000425231 UBE2BP63146 152 aa13.07□□□□□ -0.32
CDCP1-202ENST00000425231 DIRC1Q969H9 104 aa13.07□□□□□ -0.32
CDCP1-202ENST00000425231 XAGE1AQ9HD64 81 aa13.07□□□□□ -0.32
CDCP1-202ENST00000425231 A0A096LNJ9 63 aa13.06□□□□□ -0.32
CDCP1-202ENST00000425231 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
CDCP1-202ENST00000425231 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
CDCP1-202ENST00000425231 TRAPPC1Q9Y5R8 145 aa13.05□□□□□ -0.32
CDCP1-202ENST00000425231 H0Y9J4 135 aa13.05□□□□□ -0.32
CDCP1-202ENST00000425231 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
CDCP1-202ENST00000425231 C22orf24Q9Y442 160 aa13.05□□□□□ -0.32
CDCP1-202ENST00000425231 APOC3P02656 99 aa13.04□□□□□ -0.32
CDCP1-202ENST00000425231 SPINK8P0C7L1 97 aa13.04□□□□□ -0.32
CDCP1-202ENST00000425231 LINC00614P0C842 121 aa13.03□□□□□ -0.32
CDCP1-202ENST00000425231 LRP2P98164 4655 aa13□□□□□ -0.33
CDCP1-202ENST00000425231 SNAPINO95295 136 aa12.99□□□□□ -0.33
CDCP1-202ENST00000425231 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
CDCP1-202ENST00000425231 SVBPQ8N300 66 aa12.99□□□□□ -0.33
CDCP1-202ENST00000425231 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
CDCP1-202ENST00000425231 KRTAP1-4P0C5Y4 121 aa12.98□□□□□ -0.33
CDCP1-202ENST00000425231 PMCHL1Q16048 86 aa12.98□□□□□ -0.33
CDCP1-202ENST00000425231 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
CDCP1-202ENST00000425231 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
CDCP1-202ENST00000425231 H3BRM9 83 aa12.97□□□□□ -0.33
CDCP1-202ENST00000425231 HBDP02042 147 aa12.97□□□□□ -0.33
CDCP1-202ENST00000425231 NDUFA6P56556 154 aa12.96□□□□□ -0.33
CDCP1-202ENST00000425231 NDUFA5Q16718 116 aa12.96□□□□□ -0.33
CDCP1-202ENST00000425231 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.33
CDCP1-202ENST00000425231 IGLV5-39A0A0G2JS06 123 aa12.96□□□□□ -0.34
CDCP1-202ENST00000425231 RAB5BP61020 215 aa12.96□□□□□ -0.34
CDCP1-202ENST00000425231 NUPR1O60356 82 aa12.95□□□□□ -0.34
CDCP1-202ENST00000425231 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
CDCP1-202ENST00000425231 YPEL4Q96NS1 127 aa12.95□□□□□ -0.34
CDCP1-202ENST00000425231 ZNF861PO60384 105 aa12.94□□□□□ -0.34
CDCP1-202ENST00000425231 ATP5LO75964 103 aa12.92□□□□□ -0.34
CDCP1-202ENST00000425231 LINC00167Q96N53 147 aa12.92□□□□□ -0.34
CDCP1-202ENST00000425231 IGLV1-50A0A075B6I6 118 aa12.91□□□□□ -0.34
CDCP1-202ENST00000425231 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
CDCP1-202ENST00000425231 IGLV5-37A0A075B6J1 123 aa12.89□□□□□ -0.35
CDCP1-202ENST00000425231 C11orf86A6NJI1 115 aa12.89□□□□□ -0.35
CDCP1-202ENST00000425231 RPL37AP8A6NKH3 93 aa12.88□□□□□ -0.35
CDCP1-202ENST00000425231 PFN2P35080 140 aa12.88□□□□□ -0.35
CDCP1-202ENST00000425231 BCE1O60756 84 aa12.87□□□□□ -0.35
CDCP1-202ENST00000425231 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
CDCP1-202ENST00000425231 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
CDCP1-202ENST00000425231 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
CDCP1-202ENST00000425231 ERG28Q9UKR5 140 aa12.84□□□□□ -0.35
CDCP1-202ENST00000425231 RNF213Q63HN8 5207 aa12.83□□□□□ -0.35
CDCP1-202ENST00000425231 RPL28P46779 137 aaKnown RBP12.83□□□□□ -0.36
CDCP1-202ENST00000425231 COX17Q14061 63 aa12.83□□□□□ -0.36
CDCP1-202ENST00000425231 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.36
CDCP1-202ENST00000425231 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
CDCP1-202ENST00000425231 SND1-IT1Q9HBX3 110 aa12.83□□□□□ -0.36
CDCP1-202ENST00000425231 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
CDCP1-202ENST00000425231 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
CDCP1-202ENST00000425231 SCO1O75880 301 aa12.81□□□□□ -0.36
CDCP1-202ENST00000425231 CBLN2Q8IUK8 224 aa12.81□□□□□ -0.36
CDCP1-202ENST00000425231 TRAV12-1A0A0B4J245 112 aa12.8□□□□□ -0.36
CDCP1-202ENST00000425231 VPREB1P12018 145 aa12.8□□□□□ -0.36
CDCP1-202ENST00000425231 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
CDCP1-202ENST00000425231 SFTA2Q6UW10 78 aa12.79□□□□□ -0.36
CDCP1-202ENST00000425231 KRTAP13-1Q8IUC0 172 aa12.79□□□□□ -0.36
CDCP1-202ENST00000425231 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
CDCP1-202ENST00000425231 TMEM223A0PJW6 202 aa12.78□□□□□ -0.36
CDCP1-202ENST00000425231 IGKV2D-28P01615 120 aa12.78□□□□□ -0.36
CDCP1-202ENST00000425231 LPAP08519 4548 aa12.77□□□□□ -0.36
CDCP1-202ENST00000425231 Q8NDZ9 215 aa12.77□□□□□ -0.37
CDCP1-202ENST00000425231 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
CDCP1-202ENST00000425231 A0A087X002 238 aa12.75□□□□□ -0.37
CDCP1-202ENST00000425231 HSBP1O75506 76 aa12.74□□□□□ -0.37
CDCP1-202ENST00000425231 TRGC2P03986 189 aa12.74□□□□□ -0.37
CDCP1-202ENST00000425231 RPL24P83731 157 aaKnown RBP12.74□□□□□ -0.37
CDCP1-202ENST00000425231 UBE2AP49459 152 aa12.73□□□□□ -0.37
CDCP1-202ENST00000425231 LINC00158P58513 81 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms