RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 RPL36AP83881 106 aaKnown RBP4.78□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE4Q13068 117 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE5Q13069 117 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 GAGE13Q4V321 117 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 RPL36ALQ969Q0 106 aaKnown RBP4.78□□□□□ -1.64
CPSF7-203ENST00000413184 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
CPSF7-203ENST00000413184 LOC100131303A0A0U1RQF7 123 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 GAGE10A6NGK3 116 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 UBE2D3P61077 147 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 UBE2D2P62837 147 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 NTM-AS1Q6ZSK4 140 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 SLC25A29Q8N8R3 303 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 SPANXB1Q9NS25 103 aaPredicted RBP4.77□□□□□ -1.65
CPSF7-203ENST00000413184 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
CPSF7-203ENST00000413184 TRGV2A0A075B6R0 118 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 TINCRA0A1B0GVN0 87 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 LINC00694P0DN24 101 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 UBE2D1P51668 147 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
CPSF7-203ENST00000413184 GTF2H5Q6ZYL4 71 aa4.76□□□□□ -1.65
CPSF7-203ENST00000413184 TRGV4A0A0C4DH28 118 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 TRBV6-4A0A1B0GX49 114 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 CIDEAO60543 219 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 IGHV3-30P01768 117 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 SPINK8P0C7L1 97 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 IGHV3-30-5P0DP03 117 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 FABP2P12104 132 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 TIRAPP58753 221 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 FHL2Q14192 279 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 DAZ4Q86SG3 579 aaKnown RBP4.75□□□□□ -1.65
CPSF7-203ENST00000413184 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 LINC00612Q8N6U2 182 aa4.75□□□□□ -1.65
CPSF7-203ENST00000413184 DAZ3Q9NR90 486 aaKnown RBP4.75□□□□□ -1.65
CPSF7-203ENST00000413184 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 COX6A2Q02221 97 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
CPSF7-203ENST00000413184 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
CPSF7-203ENST00000413184 TMEM238LA0A1B0GVL6 79 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 A6NJY4 79 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 APOMO95445 188 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 LINC00242Q5T6M2 205 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 VSIG2Q96IQ7 327 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 LINC01600Q96MT4 127 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 GTSF1LQ9H1H1 148 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 CDKN2A-AS1Q9UH64 79 aa4.73□□□□□ -1.65
CPSF7-203ENST00000413184 CSDC2Q9Y534 153 aaKnown RBP4.73□□□□□ -1.65
CPSF7-203ENST00000413184 SMIM9A6NGZ8 99 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-203ENST00000413184 TSPAN13O95857 204 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 DEFB130BP0DP73 79 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 DEFB130AP0DP74 79 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 LITAFQ99732 161 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 NDUFA12Q9UI09 145 aa4.72□□□□□ -1.65
CPSF7-203ENST00000413184 TRAV13-1A0A0B4J241 112 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 A4D1N5 150 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 H7C423 109 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 UBE2L6O14933 153 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 CFC1BP0CG36 223 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 CFC1P0CG37 223 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 HERVK_113P63121 156 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 SMAGPQ0VAQ4 97 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 GAGE6Q13070 117 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
CPSF7-203ENST00000413184 TRBV6-8A0A0A6YYG3 113 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 SMIM1B2RUZ4 78 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 F5H768 121 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 NDUFA1O15239 70 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 GYPEP15421 78 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 ADAMTSL4-AS1Q5T5F5 129 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 FAM222AQ5U5X8 452 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 CIRBP-AS1Q8TBR5 109 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 SPANXDQ9BXN6 97 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
CPSF7-203ENST00000413184 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 A0A0B4J2C4 111 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 LYRM9A8MSI8 78 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 TIMM17BO60830 172 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 RBX1P62877 108 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
CPSF7-203ENST00000413184 MIAQ16674 131 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 ATP6V0E2Q8NHE4 81 aa4.69□□□□□ -1.66
CPSF7-203ENST00000413184 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-203ENST00000413184 H3BMG7 143 aa4.68□□□□□ -1.66
CPSF7-203ENST00000413184 IGHV3-33P01772 117 aa4.68□□□□□ -1.66
CPSF7-203ENST00000413184 NPC2P61916 151 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms