RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
CPSF7-203ENST00000413184 ABCC9O60706 1549 aa19.37■□□□□ 0.69
CPSF7-203ENST00000413184 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
CPSF7-203ENST00000413184 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
CPSF7-203ENST00000413184 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.45
CPSF7-203ENST00000413184 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
CPSF7-203ENST00000413184 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
CPSF7-203ENST00000413184 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
CPSF7-203ENST00000413184 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
CPSF7-203ENST00000413184 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
CPSF7-203ENST00000413184 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
CPSF7-203ENST00000413184 CUX2O14529 1486 aa17.3■□□□□ 0.36
CPSF7-203ENST00000413184 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
CPSF7-203ENST00000413184 NACADO15069 1562 aa17.22■□□□□ 0.35
CPSF7-203ENST00000413184 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
CPSF7-203ENST00000413184 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
CPSF7-203ENST00000413184 DCAF8L2P0C7V8 631 aa16.94■□□□□ 0.3
CPSF7-203ENST00000413184 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
CPSF7-203ENST00000413184 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
CPSF7-203ENST00000413184 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-203ENST00000413184 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
CPSF7-203ENST00000413184 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-203ENST00000413184 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
CPSF7-203ENST00000413184 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
CPSF7-203ENST00000413184 SCRIBQ14160 1630 aa16.27■□□□□ 0.2
CPSF7-203ENST00000413184 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
CPSF7-203ENST00000413184 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
CPSF7-203ENST00000413184 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
CPSF7-203ENST00000413184 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-203ENST00000413184 NESP48681 1621 aa16.19■□□□□ 0.18
CPSF7-203ENST00000413184 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
CPSF7-203ENST00000413184 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
CPSF7-203ENST00000413184 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
CPSF7-203ENST00000413184 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
CPSF7-203ENST00000413184 NCAPD3P42695 1498 aa15.9■□□□□ 0.14
CPSF7-203ENST00000413184 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
CPSF7-203ENST00000413184 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
CPSF7-203ENST00000413184 MRC2Q9UBG0 1479 aa15.74■□□□□ 0.11
CPSF7-203ENST00000413184 WDR62O43379 1518 aa15.73■□□□□ 0.11
CPSF7-203ENST00000413184 ARAP1Q96P48 1450 aa15.73■□□□□ 0.11
CPSF7-203ENST00000413184 LMTK3Q96Q04 1460 aa15.69■□□□□ 0.1
CPSF7-203ENST00000413184 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
CPSF7-203ENST00000413184 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
CPSF7-203ENST00000413184 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
CPSF7-203ENST00000413184 SOCS7O14512 581 aa15.62■□□□□ 0.09
CPSF7-203ENST00000413184 FBXO41Q8TF61 875 aa15.58■□□□□ 0.08
CPSF7-203ENST00000413184 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
CPSF7-203ENST00000413184 KDM4FA0A1W2PPD8 638 aa15.49■□□□□ 0.07
CPSF7-203ENST00000413184 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
CPSF7-203ENST00000413184 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
CPSF7-203ENST00000413184 ILDR2Q71H61 639 aa15.43■□□□□ 0.06
CPSF7-203ENST00000413184 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-203ENST00000413184 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
CPSF7-203ENST00000413184 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
CPSF7-203ENST00000413184 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
CPSF7-203ENST00000413184 CHD1O14646 1710 aa15.29■□□□□ 0.04
CPSF7-203ENST00000413184 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
CPSF7-203ENST00000413184 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
CPSF7-203ENST00000413184 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-203ENST00000413184 FBLN2P98095 1184 aa15.22■□□□□ 0.03
CPSF7-203ENST00000413184 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
CPSF7-203ENST00000413184 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
CPSF7-203ENST00000413184 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
CPSF7-203ENST00000413184 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
CPSF7-203ENST00000413184 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
CPSF7-203ENST00000413184 KIF13AQ9H1H9 1805 aa15.09■□□□□ 0.01
CPSF7-203ENST00000413184 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
CPSF7-203ENST00000413184 GAPVD1Q14C86 1478 aa15.04■□□□□ -0
CPSF7-203ENST00000413184 ADGRL1O94910 1474 aa15.03■□□□□ -0
CPSF7-203ENST00000413184 CLASP1Q7Z460 1538 aa15.02■□□□□ -0
CPSF7-203ENST00000413184 KDM6BO15054 1643 aa15.01□□□□□ -0.01
CPSF7-203ENST00000413184 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
CPSF7-203ENST00000413184 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.023e-7■■■■■ 48.1
CPSF7-203ENST00000413184 SYNJ1O43426 1573 aa14.93□□□□□ -0.02
CPSF7-203ENST00000413184 FAM69CQ0P6D2 419 aa14.88□□□□□ -0.03
CPSF7-203ENST00000413184 CFTRP13569 1480 aa14.86□□□□□ -0.03
CPSF7-203ENST00000413184 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-203ENST00000413184 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
CPSF7-203ENST00000413184 ABCC10Q5T3U5 1492 aa14.77□□□□□ -0.04
CPSF7-203ENST00000413184 TOPBP1Q92547 1522 aa14.75□□□□□ -0.05
CPSF7-203ENST00000413184 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
CPSF7-203ENST00000413184 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
CPSF7-203ENST00000413184 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
CPSF7-203ENST00000413184 DIP2BQ9P265 1576 aa14.69□□□□□ -0.06
CPSF7-203ENST00000413184 CERKQ8TCT0 537 aa14.68□□□□□ -0.06
CPSF7-203ENST00000413184 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
CPSF7-203ENST00000413184 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
CPSF7-203ENST00000413184 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
CPSF7-203ENST00000413184 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-203ENST00000413184 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
CPSF7-203ENST00000413184 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
CPSF7-203ENST00000413184 MAPKBP1O60336 1514 aa14.57□□□□□ -0.08
CPSF7-203ENST00000413184 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
CPSF7-203ENST00000413184 CEP170Q5SW79 1584 aa14.52□□□□□ -0.08
CPSF7-203ENST00000413184 WIZO95785 1651 aa14.5□□□□□ -0.09
CPSF7-203ENST00000413184 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-203ENST00000413184 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
CPSF7-203ENST00000413184 GRIN2BQ13224 1484 aa14.46□□□□□ -0.09
CPSF7-203ENST00000413184 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
CPSF7-203ENST00000413184 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms