RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 B9D2Q9BPU9 175 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 ABCA1O95477 2261 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-53P01767 116 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 CCL18P55774 89 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 URB1O60287 2271 aaKnown RBP3.49□□□□□ -1.85
HERC4-205ENST00000412272 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
HERC4-205ENST00000412272 C1orf134Q5TEV5 83 aa3.48□□□□□ -1.85
HERC4-205ENST00000412272 LINC00208Q96KT6 92 aa3.48□□□□□ -1.85
HERC4-205ENST00000412272 ASXL3Q9C0F0 2248 aa3.48□□□□□ -1.85
HERC4-205ENST00000412272 FRYQ5TBA9 3013 aa3.48□□□□□ -1.85
HERC4-205ENST00000412272 Q6ZR54 194 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 C5orf42Q9H799 3197 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-66A0A0C4DH42 116 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 ROMO1P60602 79 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 FAM74A4Q5TZK3 123 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 COX7B2Q8TF08 81 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-73A0A0B4J1V6 119 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
HERC4-205ENST00000412272 ATP6V0E1O15342 81 aa3.46□□□□□ -1.85
HERC4-205ENST00000412272 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.85
HERC4-205ENST00000412272 SMIM29Q86T20 159 aa3.46□□□□□ -1.85
HERC4-205ENST00000412272 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.85
HERC4-205ENST00000412272 PLA2G2AP14555 144 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 LINC00575Q6W349 94 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 MUC7Q8TAX7 377 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
HERC4-205ENST00000412272 IGHV4-30-2A0A087WSY4 118 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 A0A1B0GW54 56 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 COX7A1P24310 79 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
HERC4-205ENST00000412272 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
HERC4-205ENST00000412272 IGHV3OR16-8A0A075B7F1 116 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 INAFM1C9JVW0 142 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 NDUFB1O75438 58 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 USMG5Q96IX5 58 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 LAMA1P25391 3075 aa3.45□□□□□ -1.86
HERC4-205ENST00000412272 RNASE1P07998 156 aaKnown RBP3.44□□□□□ -1.86
HERC4-205ENST00000412272 COX17Q14061 63 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 LOC400499M0QZD8 3231 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 SDK1Q7Z5N4 2213 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 FREM2Q5SZK8 3169 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 CSMD2Q7Z408 3487 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 KNL1Q8NG31 2342 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 FAM215AQ9Y5M1 114 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 TRANK1O15050 2925 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 CHD7Q9P2D1 2997 aa3.44□□□□□ -1.86
HERC4-205ENST00000412272 CSMD1Q96PZ7 3565 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 IGHV4-59P01825 116 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 P0C880 135 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 Q6ZSN1 163 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 C5orf56Q8N8D9 126 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 MED13LQ71F56 2210 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
HERC4-205ENST00000412272 DOPEY2Q9Y3R5 2298 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 CHD9Q3L8U1 2897 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 IGHV3OR16-13A0A075B7E8 117 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 IGHV3-74A0A0B4J1X5 117 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 ETDCA0A1B0GVM5 59 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 IGHV4-30-4P0DP06 118 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 DEFB1P60022 68 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 ODF3L2Q3SX64 289 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 C11orf71Q6IPW1 123 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 RHPN1-AS1Q9BWJ2 59 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 CR1P17927 2039 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 GYPEP15421 78 aa3.42□□□□□ -1.86
HERC4-205ENST00000412272 IGHV4-28A0A0C4DH34 117 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 COX7BP24311 80 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 PROK1P58294 105 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 A0A1W2PNU3 283 aaPredicted RBP3.41□□□□□ -1.86
HERC4-205ENST00000412272 LINC00158P58513 81 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 Q8IZM0 81 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 WFDC10AQ9H1F0 79 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 ZZEF1O43149 2961 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
HERC4-205ENST00000412272 COA5Q86WW8 74 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 KCNQ1DNQ9H478 68 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 TRIOO75962 3097 aa3.41□□□□□ -1.86
HERC4-205ENST00000412272 ATP1A1-AS1Q5TC04 95 aa3.4□□□□□ -1.86
HERC4-205ENST00000412272 G3V318 75 aa3.39□□□□□ -1.87
HERC4-205ENST00000412272 IGLV1-40P01703 118 aa3.39□□□□□ -1.87
HERC4-205ENST00000412272 IGLV6-57P01721 117 aa3.39□□□□□ -1.87
HERC4-205ENST00000412272 TMEM105Q8N8V8 129 aa3.39□□□□□ -1.87
HERC4-205ENST00000412272 IGHV4-61A0A0C4DH41 118 aa3.39□□□□□ -1.87
HERC4-205ENST00000412272 CACNA1EQ15878 2313 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 H3BPC8 53 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 IGHV3-11P01762 117 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 SPAG11AQ6PDA7 123 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 KALRNO60229 2985 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
HERC4-205ENST00000412272 C9orf163Q8N9P6 203 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 Q8NDZ9 215 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 KLK12Q9UKR0 248 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 DSCR9P59020 149 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
HERC4-205ENST00000412272 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms