RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PKD1L1Q8TDX9 2849 aa16.76■□□□□ 0.27
VRK2-202ENST00000412104 COX7A2LO14548 114 aa16.76■□□□□ 0.27
VRK2-202ENST00000412104 LYPD5Q6UWN5 251 aa16.76■□□□□ 0.27
VRK2-202ENST00000412104 Q6ZTC4 211 aa16.76■□□□□ 0.27
VRK2-202ENST00000412104 C9JAW5 83 aa16.75■□□□□ 0.27
VRK2-202ENST00000412104 MAST4O15021 2626 aa16.74■□□□□ 0.27
VRK2-202ENST00000412104 H3BNG1 76 aa16.74■□□□□ 0.27
VRK2-202ENST00000412104 PFN2P35080 140 aa16.74■□□□□ 0.27
VRK2-202ENST00000412104 LINC01620Q4KN68 170 aa16.74■□□□□ 0.27
VRK2-202ENST00000412104 SLC25A20O43772 301 aa16.73■□□□□ 0.27
VRK2-202ENST00000412104 KPRPQ5T749 579 aaPredicted RBP16.73■□□□□ 0.27
VRK2-202ENST00000412104 C2orf82Q6UX34 121 aa16.72■□□□□ 0.27
VRK2-202ENST00000412104 A0A0J9YWU9 116 aa16.72■□□□□ 0.27
VRK2-202ENST00000412104 J3QR89 54 aa16.72■□□□□ 0.27
VRK2-202ENST00000412104 ANK2Q01484 3957 aa16.72■□□□□ 0.27
VRK2-202ENST00000412104 BAHCC1Q9P281 2608 aa16.71■□□□□ 0.27
VRK2-202ENST00000412104 FOXI1Q12951 378 aa16.71■□□□□ 0.27
VRK2-202ENST00000412104 TEN1Q86WV5 123 aa16.71■□□□□ 0.27
VRK2-202ENST00000412104 CLEC2BQ92478 149 aa16.71■□□□□ 0.27
VRK2-202ENST00000412104 SND1-IT1Q9HBX3 110 aa16.71■□□□□ 0.27
VRK2-202ENST00000412104 KIAA0087Q14695 138 aa16.7■□□□□ 0.26
VRK2-202ENST00000412104 MALP21145 153 aa16.7■□□□□ 0.26
VRK2-202ENST00000412104 CCL18P55774 89 aa16.7■□□□□ 0.26
VRK2-202ENST00000412104 PRR34Q9NV39 138 aa16.7■□□□□ 0.26
VRK2-202ENST00000412104 KLK12Q9UKR0 248 aa16.7■□□□□ 0.26
VRK2-202ENST00000412104 DNAH3Q8TD57 4116 aa16.69■□□□□ 0.26
VRK2-202ENST00000412104 M0QXV9 152 aa16.69■□□□□ 0.26
VRK2-202ENST00000412104 CKS1BP61024 79 aa16.68■□□□□ 0.26
VRK2-202ENST00000412104 ANKRD29Q8N6D5 301 aa16.68■□□□□ 0.26
VRK2-202ENST00000412104 IGKV2-28A0A075B6P5 120 aa16.67■□□□□ 0.26
VRK2-202ENST00000412104 LST1O00453 97 aa16.67■□□□□ 0.26
VRK2-202ENST00000412104 IGKV2D-28P01615 120 aa16.67■□□□□ 0.26
VRK2-202ENST00000412104 CFAP161Q6P656 301 aa16.67■□□□□ 0.26
VRK2-202ENST00000412104 TRAV13-2A0A0B4J235 113 aa16.66■□□□□ 0.26
VRK2-202ENST00000412104 CRPP02741 224 aa16.66■□□□□ 0.26
VRK2-202ENST00000412104 CXCL5P42830 114 aa16.66■□□□□ 0.26
VRK2-202ENST00000412104 GAGE12HA6NDE8 117 aa16.66■□□□□ 0.26
VRK2-202ENST00000412104 NANOS2P60321 138 aaKnown RBP16.66■□□□□ 0.26
VRK2-202ENST00000412104 LINC00337Q8N6G1 96 aa16.66■□□□□ 0.26
VRK2-202ENST00000412104 TRBV10-2A0A0K0K1G8 114 aa16.65■□□□□ 0.26
VRK2-202ENST00000412104 ENHOQ6UWT2 76 aa16.65■□□□□ 0.26
VRK2-202ENST00000412104 PPDPFLQ8WWR9 84 aa16.64■□□□□ 0.26
VRK2-202ENST00000412104 WFDC10BQ8IUB3 73 aa16.64■□□□□ 0.25
VRK2-202ENST00000412104 C11orf45Q8TAV5 145 aa16.64■□□□□ 0.25
VRK2-202ENST00000412104 CARD19Q96LW7 228 aa16.64■□□□□ 0.25
VRK2-202ENST00000412104 LINC01600Q96MT4 127 aa16.62■□□□□ 0.25
VRK2-202ENST00000412104 TENM3Q9P273 2699 aa16.62■□□□□ 0.25
VRK2-202ENST00000412104 PRB2P02812 416 aaPredicted RBP16.62■□□□□ 0.25
VRK2-202ENST00000412104 DEFB131BA0A096LNP1 70 aa16.6■□□□□ 0.25
VRK2-202ENST00000412104 KLK5Q9Y337 293 aaPredicted RBP16.6■□□□□ 0.25
VRK2-202ENST00000412104 COL6A5A8TX70 2615 aa16.59■□□□□ 0.25
VRK2-202ENST00000412104 UBE2WQ96B02 151 aa16.58■□□□□ 0.25
VRK2-202ENST00000412104 SPAG11BQ08648 103 aa16.58■□□□□ 0.24
VRK2-202ENST00000412104 COX17Q14061 63 aa16.58■□□□□ 0.24
VRK2-202ENST00000412104 RPL28P46779 137 aaKnown RBP16.57■□□□□ 0.24
VRK2-202ENST00000412104 ESRGQ1W209 222 aa16.57■□□□□ 0.24
VRK2-202ENST00000412104 TRAV8-4A0A0B4J246 113 aa16.56■□□□□ 0.24
VRK2-202ENST00000412104 H3BT86 120 aa16.56■□□□□ 0.24
VRK2-202ENST00000412104 SPATA25Q9BR10 227 aa16.56■□□□□ 0.24
VRK2-202ENST00000412104 NTN5Q8WTR8 489 aaPredicted RBP16.55■□□□□ 0.24
VRK2-202ENST00000412104 C9orf116Q5BN46 136 aaPredicted RBP16.55■□□□□ 0.24
VRK2-202ENST00000412104 C6orf223Q8N319 242 aa16.55■□□□□ 0.24
VRK2-202ENST00000412104 K7EIL1 84 aa16.53■□□□□ 0.24
VRK2-202ENST00000412104 NOTCH1P46531 2555 aa16.53■□□□□ 0.24
VRK2-202ENST00000412104 SMIM11BQ8TCY0 68 aa16.53■□□□□ 0.24
VRK2-202ENST00000412104 TM2D3Q9BRN9 247 aa16.53■□□□□ 0.24
VRK2-202ENST00000412104 C10orf25Q5T742 122 aa16.52■□□□□ 0.23
VRK2-202ENST00000412104 LINC00526Q96FQ7 95 aa16.52■□□□□ 0.23
VRK2-202ENST00000412104 UNQ6190/PRO20217Q6UXQ8 127 aa16.51■□□□□ 0.23
VRK2-202ENST00000412104 FAM218AQ96MZ4 157 aa16.51■□□□□ 0.23
VRK2-202ENST00000412104 PCP4P48539 62 aa16.5■□□□□ 0.23
VRK2-202ENST00000412104 TRACP01848 142 aa16.49■□□□□ 0.23
VRK2-202ENST00000412104 OR13C6PQ8NH95 151 aa16.49■□□□□ 0.23
VRK2-202ENST00000412104 MRAPQ8TCY5 172 aa16.49■□□□□ 0.23
VRK2-202ENST00000412104 TEX49A0A1B0GTD5 131 aa16.48■□□□□ 0.23
VRK2-202ENST00000412104 DEFB121Q5J5C9 76 aa16.47■□□□□ 0.23
VRK2-202ENST00000412104 KRTAP26-1Q6PEX3 210 aa16.47■□□□□ 0.23
VRK2-202ENST00000412104 NDUFC2O95298 119 aa16.46■□□□□ 0.23
VRK2-202ENST00000412104 LINC01556Q5JQF7 62 aa16.46■□□□□ 0.23
VRK2-202ENST00000412104 TRAV10A0A0B4J240 114 aa16.45■□□□□ 0.22
VRK2-202ENST00000412104 PRR3P79522 188 aaKnown RBP16.43■□□□□ 0.22
VRK2-202ENST00000412104 MUC7Q8TAX7 377 aa16.43■□□□□ 0.22
VRK2-202ENST00000412104 CDIP1Q9H305 208 aa16.43■□□□□ 0.22
VRK2-202ENST00000412104 GVQW2A0A096LPI5 108 aaPredicted RBP16.41■□□□□ 0.22
VRK2-202ENST00000412104 SIGMAR1Q99720 223 aa16.41■□□□□ 0.22
VRK2-202ENST00000412104 NBEAL1Q6ZS30 2694 aa16.41■□□□□ 0.22
VRK2-202ENST00000412104 C15orf53Q8NAA6 179 aa16.4■□□□□ 0.22
VRK2-202ENST00000412104 Q8NDZ9 215 aa16.4■□□□□ 0.22
VRK2-202ENST00000412104 C6orf48Q9UBA6 75 aa16.4■□□□□ 0.22
VRK2-202ENST00000412104 H0YGX0 51 aa16.39■□□□□ 0.21
VRK2-202ENST00000412104 HIGD2BQ4VC39 106 aa16.39■□□□□ 0.21
VRK2-202ENST00000412104 A0A087WYN8 130 aa16.38■□□□□ 0.21
VRK2-202ENST00000412104 C1orf43Q9BWL3 253 aa16.38■□□□□ 0.21
VRK2-202ENST00000412104 ZNF561-AS1K7EIQ3 104 aa16.37■□□□□ 0.21
VRK2-202ENST00000412104 DNAH10OSP0CZ25 163 aa16.37■□□□□ 0.21
VRK2-202ENST00000412104 C21orf62-AS1Q17RA5 79 aa16.37■□□□□ 0.21
VRK2-202ENST00000412104 Q9HAA7 133 aa16.37■□□□□ 0.21
VRK2-202ENST00000412104 NCR3O14931 201 aa16.36■□□□□ 0.21
VRK2-202ENST00000412104 BAALC-AS2P0C853 105 aa16.36■□□□□ 0.21
VRK2-202ENST00000412104 C15orf56Q8N910 161 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms