RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PHLDA3Q9Y5J5 127 aa1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 CNTRLQ7Z7A1 2325 aa1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 ASXL3Q9C0F0 2248 aa1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 SDK2Q58EX2 2172 aa1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 PRR14LQ5THK1 2151 aa1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 ASH1LQ9NR48 2969 aaKnown RBP1.52□□□□□ -2.17
HMGB3P2-201ENST00000411913 VCANP13611 3396 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3-64A0A075B6Q5 118 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRAV23DV6A0A075B6W5 121 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3-74A0A0B4J1X5 117 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3-72A0A0B4J1Y9 119 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRAV10A0A0B4J240 114 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3-66A0A0C4DH42 116 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 LCE6AA0A183 80 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 E7EQL1 145 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 F8WEM9 126 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 JMJD7-PLA2G4BH0Y9G9 81 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 GNRH2O43555 120 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 ENSAO43768 121 aaKnown RBP1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 MGPP08493 103 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 APELAP0DMC3 54 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 ESRGQ1W209 222 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 ENHOQ6UWT2 76 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 UNQ9165/PRO28630Q6UXU0 137 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q6ZS52 159 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB132Q7Z7B7 95 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 LINC00337Q8N6G1 96 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q8N9L7 120 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 C11orf72Q8NBR9 251 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 RMI2Q96E14 147 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 CHCHD7Q9BUK0 85 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 C5orf42Q9H799 3197 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 KNL1Q8NG31 2342 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 ASCC3Q8N3C0 2202 aaKnown RBP1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 FLNBO75369 2602 aaKnown RBP1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 REV3LO60673 3130 aa1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 ZFHX2Q9C0A1 2572 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P2-201ENST00000411913 FASNP49327 2511 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 LAMA3Q16787 3333 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 LAMA1P25391 3075 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 BDP1A6H8Y1 2624 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 FRYLO94915 3013 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 A0A096LNT2 108 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRAV12-3A0A0B4J271 114 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 hDV103S1A0JD37 113 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 ODF3BA8MYP8 253 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 NCR3O14931 201 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 ZZEF1O43149 2961 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 CD28P10747 220 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 CCL4P13236 92 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 S100A4P26447 101 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 PI4KAP42356 2102 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 SNRPD3P62318 126 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 RBM3P98179 157 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q6ZQT0 140 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 MIR7-3HGQ8N6C7 128 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 C15orf56Q8N910 161 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 WFDC9Q8NEX5 89 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 RETNQ9HD89 108 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 ORMDL1Q9P0S3 153 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 CDKN2A-AS1Q9UH64 79 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 LINC00588Q9Y4M8 146 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 SNURFQ9Y675 71 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 DSPP15924 2871 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 PCLOQ9Y6V0 5065 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 GCN1Q92616 2671 aaKnown RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 ABCA1O95477 2261 aa1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 COL27A1Q8IZC6 1860 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P2-201ENST00000411913 DOCK10Q96BY6 2186 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 MUC4Q99102 2169 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 NACAE9PAV3 2078 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 KALRNO60229 2985 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 K7EMT4 169 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 M0R378 163 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 NDUFB3O43676 98 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 LY6HO94772 140 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 TLX1NBP0CAT3 122 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 CCL5P13501 91 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 PRR3P79522 188 aaKnown RBP1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 COX6A2Q02221 97 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 PHF5AQ7RTV0 110 aaKnown RBP1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB119Q8N690 84 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 TMEM254Q8TBM7 123 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 CCL17Q92583 94 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 UBL5Q9BZL1 73 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 RBM12B-AS1Q9P1G2 102 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 S4R3C0 116 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 CFAP47Q6ZTR5 3102 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 PLXNB1O43157 2135 aa1.49□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRIOO75962 3097 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 PRUNE2Q8WUY3 3088 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 MKI67P46013 3256 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms