RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 IGKV1D-37A0A075B6S9 117 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV7-4-1A0A0J9YVY3 117 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 NDUFA4O00483 81 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 IGHV3-33P01772 117 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 NPC2P61916 151 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 DEFB114Q30KQ6 69 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 FAM104BQ5XKR9 115 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 PRNTQ86SH4 94 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 ORMDL3Q8N138 153 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 DAND5Q8N907 189 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 RPL36ALQ969Q0 106 aaKnown RBP3.22□□□□□ -1.89
SF3B1-202ENST00000409915 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 DAZ1Q9NQZ3 744 aaKnown RBP3.22□□□□□ -1.89
SF3B1-202ENST00000409915 PRO1854Q9UHT4 67 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 COL7A1Q02388 2944 aa3.22□□□□□ -1.89
SF3B1-202ENST00000409915 IGKV1OR2-108A0A075B7D4 117 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 TRBV7-6A0A0J9YX20 115 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 IGHV3-30P01768 117 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 CFC1BP0CG36 223 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 CFC1P0CG37 223 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 IGHV3-30-5P0DP03 117 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 MP68P56378 58 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 LYZP61626 148 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 ERCC8Q13216 396 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 FP248Q71RG6 208 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-202ENST00000409915 MIR17HGQ75NE6 70 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 FAM19A3Q7Z5A8 133 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 Q8NBF4 154 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 RHPN1-AS1Q9BWJ2 59 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 TTTY13Q9BZ97 58 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 SMAD5-AS1Q9Y6J3 95 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 SORL1Q92673 2214 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
SF3B1-202ENST00000409915 TMSB15BA0A087X1C1 80 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 TRAV26-2A0A0B4J265 109 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 KLLNB2CW77 178 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 F8VRH5 84 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 K7EMI3 77 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-202ENST00000409915 LINC00322Q6ZN03 302 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-202ENST00000409915 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 DCANP1Q8TF63 244 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 TMEM263Q8WUH6 116 aaKnown RBP3.2□□□□□ -1.9
SF3B1-202ENST00000409915 PAXXQ9BUH6 204 aa3.2□□□□□ -1.9
SF3B1-202ENST00000409915 TENM3Q9P273 2699 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 IGLV2-18A0A075B6J9 118 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 A0A0J9YY99 117 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 KNCNA6PVL3 124 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 H3BVH4 76 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 H7C423 109 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 HERVK_113P61574 105 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 CXCL6P80162 114 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 DAZ2Q13117 558 aaKnown RBP3.19□□□□□ -1.9
SF3B1-202ENST00000409915 MRPL51Q4U2R6 128 aaKnown RBP3.19□□□□□ -1.9
SF3B1-202ENST00000409915 C2orf82Q6UX34 121 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 DAZ4Q86SG3 579 aaKnown RBP3.19□□□□□ -1.9
SF3B1-202ENST00000409915 RNF182Q8N6D2 247 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 B9D2Q9BPU9 175 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 CNFNQ9BYD5 112 aa3.19□□□□□ -1.9
SF3B1-202ENST00000409915 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
SF3B1-202ENST00000409915 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
SF3B1-202ENST00000409915 NBEAL2Q6ZNJ1 2754 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-202ENST00000409915 D6R8Y8 96 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 LST1O00453 97 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 ARMS2P0C7Q2 107 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 PRB4P10163 310 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-202ENST00000409915 ZNF22P17026 224 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-202ENST00000409915 DEFB1P60022 68 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 Q6JHZ5 121 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 TMEM75Q8N9X5 138 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 OTORQ9NRC9 128 aa3.18□□□□□ -1.9
SF3B1-202ENST00000409915 STAB2Q8WWQ8 2551 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 TRBV19A0A075B6N1 114 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 A0A0J9YX75 114 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 IBA57-AS1B1ANH7 110 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 H3BRN7 92 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 COX7A2P2O60397 106 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 DEFB131AP59861 70 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 CASC10Q5T4H9 136 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 PATE2Q6UY27 113 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 SMIM29Q86T20 159 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 Q86TA4 180 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 VSIG2Q96IQ7 327 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 TIMM17AQ99595 171 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
SF3B1-202ENST00000409915 ZNF706Q9Y5V0 76 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-202ENST00000409915 KMT2CQ8NEZ4 4911 aaKnown RBP3.16□□□□□ -1.9
SF3B1-202ENST00000409915 A0A087X002 238 aa3.16□□□□□ -1.9
SF3B1-202ENST00000409915 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
SF3B1-202ENST00000409915 ZNF815PA8K554 130 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms