RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 HERVK_113P61574 105 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 TRAV10A0A0B4J240 114 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 CD164Q04900 197 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 C4orf26Q17RF5 130 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 LYPD5Q6UWN5 251 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 NOTCH1P46531 2555 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 LOC107984640A0A0U1RRK4 108 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 Q5XG85 94 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 C15orf53Q8NAA6 179 aa3.79□□□□□ -1.8
EPHA4-202ENST00000409854 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 LEPROTO15243 131 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 TSPEAR-AS2P59090 65 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 COX6A2Q02221 97 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 GAGE2AQ6NT46 116 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 COPS9Q8WXC6 57 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
EPHA4-202ENST00000409854 CDKN2A-AS1Q9UH64 79 aa3.78□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV1-58A0A0C4DH39 117 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 MYMXA0A1B0GTQ4 84 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 SCGB1C2P0DMR2 95 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 COL7A1Q02388 2944 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3-64A0A075B6Q5 118 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 TRAV13-1A0A0B4J241 112 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 LINC00959A0A1B0GUT2 108 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 J3QQQ9 107 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 TRACP01848 142 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 COX7CP15954 63 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 FAM19A1Q7Z5A9 133 aa3.77□□□□□ -1.81
EPHA4-202ENST00000409854 DNHD1Q96M86 4753 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3-30-3P0DP02 117 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 CEND1Q8N111 149 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 MGAM2Q2M2H8 2515 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3OR16-9A0A0B4J2B5 98 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 CXCL5P42830 114 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 ESRGQ1W209 222 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 Q8N3U1 123 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 KRTAP3-2Q9BYR7 98 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 TRAV8-3A0A0A6YYJ7 113 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 ZNF815PA8K554 130 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 ACYP1P07311 99 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 RPL13AP40429 203 aaKnown RBP3.76□□□□□ -1.81
EPHA4-202ENST00000409854 CD164L2Q6UWJ8 174 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
EPHA4-202ENST00000409854 LGALS3P17931 250 aaKnown RBP3.75□□□□□ -1.81
EPHA4-202ENST00000409854 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 LINC00269Q8N2A0 174 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 A0A087WZ39 114 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 EPM2AB3EWF7 344 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 K7ERJ3 54 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 REG3AQ06141 175 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 SS18Q15532 418 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 SCGB1D4Q6XE38 83 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 CARD19Q96LW7 228 aa3.75□□□□□ -1.81
EPHA4-202ENST00000409854 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
EPHA4-202ENST00000409854 PFN2P35080 140 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 DYNC2H1Q8NCM8 4307 aaKnown RBP3.74□□□□□ -1.81
EPHA4-202ENST00000409854 H7C2G1 150 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 ATOX1O00244 68 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 NDUFA1O15239 70 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 LINC01556Q5JQF7 62 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 IGKV3OR2-268A0A0C4DH90 116 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 ENHOQ6UWT2 76 aa3.74□□□□□ -1.81
EPHA4-202ENST00000409854 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
EPHA4-202ENST00000409854 TRAV8-4A0A0B4J246 113 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 DNAH10OSP0CZ25 163 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 CLPSL2Q6UWE3 100 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 UPK3BQ9BT76 320 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 SMCPP49901 116 aaPredicted RBP3.73□□□□□ -1.81
EPHA4-202ENST00000409854 CHCHD10Q8WYQ3 142 aaPredicted RBP3.73□□□□□ -1.81
EPHA4-202ENST00000409854 ZNF625Q96I27 306 aaPredicted RBP3.73□□□□□ -1.81
EPHA4-202ENST00000409854 LITAFQ99732 161 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
EPHA4-202ENST00000409854 TIMM17BO60830 172 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3-30P01768 117 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3-33P01772 117 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 IGHV3-30-5P0DP03 117 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 XCL1P47992 114 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 KLK12Q9UKR0 248 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 FAM236DA0A1B0GTK5 79 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 FAM236AA0A1B0GUQ0 79 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 FAM236BA0A1B0GV22 79 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 FAM236CP0DP71 79 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 SRSF9Q13242 221 aaKnown RBP eCLIP3.72□□□□□ -1.81
EPHA4-202ENST00000409854 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 COX7B2Q8TF08 81 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 A0A0U1RQV1 116 aa3.72□□□□□ -1.81
EPHA4-202ENST00000409854 FXYD2P54710 66 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms