RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CSDC2Q9Y534 153 aaKnown RBP2.64□□□□□ -1.99
CLK1-203ENST00000409769 DNAH6Q9C0G6 4158 aa2.64□□□□□ -1.99
CLK1-203ENST00000409769 SACSQ9NZJ4 4579 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 ATP5LO75964 103 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 FGF6P10767 208 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 FABP4P15090 132 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 ZNF25P17030 456 aaPredicted RBP2.63□□□□□ -1.99
CLK1-203ENST00000409769 S100A2P29034 98 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 MRPS36P82909 103 aaKnown RBP2.63□□□□□ -1.99
CLK1-203ENST00000409769 MPV17L2Q567V2 206 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 CASC10Q5T4H9 136 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 ERASQ7Z444 233 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 SPATA12Q7Z6I5 190 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 WFDC10BQ8IUB3 73 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 LINC01561Q8N1V8 128 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 Q8N976 141 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 MUC7Q8TAX7 377 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 BAALCQ8WXS3 180 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 IFI27L1Q96BM0 104 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 TMEM141Q96I45 108 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 AMELXQ99217 191 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 SPANXA1Q9NS26 97 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 HSPB8Q9UJY1 196 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 KLK5Q9Y337 293 aaPredicted RBP2.63□□□□□ -1.99
CLK1-203ENST00000409769 MRPS16Q9Y3D3 137 aaKnown RBP2.63□□□□□ -1.99
CLK1-203ENST00000409769 TGP01266 2768 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
CLK1-203ENST00000409769 ALMS1Q8TCU4 4167 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 IGLV4-60A0A075B6I1 120 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 TRAV12-1A0A0B4J245 112 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 UBE2L6O14933 153 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 C3orf79P0CE67 100 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 LINC01556Q5JQF7 62 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 Q6ZUT4 128 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 FAM19A3Q7Z5A8 133 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 SCGB3A1Q96QR1 104 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 CDC42SE2Q9NRR3 84 aa2.62□□□□□ -1.99
CLK1-203ENST00000409769 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 A0A087WX48 190 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 TRAV8-6A0A0B4J262 113 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 C3orf84H3BNL1 204 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.61□□□□□ -1.99
CLK1-203ENST00000409769 SIVA1O15304 175 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 UBE2D1P51668 147 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 CCL18P55774 89 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 KRTDAPP60985 99 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 PKIAP61925 76 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 RBX1P62877 108 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 SMAGPQ0VAQ4 97 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 JOSD1Q15040 202 aaPredicted RBP2.61□□□□□ -1.99
CLK1-203ENST00000409769 PMVKQ15126 192 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 PYY3Q5JQD4 70 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 LINC01545Q5VT33 79 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 ZFAND6Q6FIF0 208 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 Q6ZN92 141 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 ZNF664Q8N3J9 261 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 OR5A1Q8NGJ0 315 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 MAP1LC3CQ9BXW4 147 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 CST9LQ9H4G1 147 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 DNAH10Q8IVF4 4471 aa2.61□□□□□ -1.99
CLK1-203ENST00000409769 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 F8VRH5 84 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 IGLC3P0DOY3 106 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 REG3AQ06141 175 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 RNASE13Q5GAN3 156 aaKnown RBP2.6□□□□□ -1.99
CLK1-203ENST00000409769 AMMECR1LQ6DCA0 310 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 KRTAP26-1Q6PEX3 210 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 ENHOQ6UWT2 76 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 TEX43Q6ZNM6 134 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 VCX2Q9H322 139 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 MRPL35Q9NZE8 188 aaKnown RBP2.6□□□□□ -1.99
CLK1-203ENST00000409769 KLK12Q9UKR0 248 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 CHTOPQ9Y3Y2 248 aaKnown RBP2.6□□□□□ -1.99
CLK1-203ENST00000409769 HYDINQ4G0P3 5121 aa2.6□□□□□ -1.99
CLK1-203ENST00000409769 DNAH2Q9P225 4427 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 A0A0J9YXV3 536 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 LINC00959A0A1B0GUT2 108 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 IBA57-AS1B1ANH7 110 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -1.99
CLK1-203ENST00000409769 K7EP13 123 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 CCL25O15444 150 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 IGHV3-30P01768 117 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 IGHV3-33P01772 117 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 IGHV3-30-3P0DP02 117 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 IGHV3-30-5P0DP03 117 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 COX6A2Q02221 97 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 LINC00269Q8N2A0 174 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 NKAPP1Q8N9T2 125 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 C2orf88Q9BSF0 95 aa2.59□□□□□ -1.99
CLK1-203ENST00000409769 RYR2Q92736 4967 aa2.59□□□□□ -2
CLK1-203ENST00000409769 TENM2Q9NT68 2774 aa2.59□□□□□ -2
CLK1-203ENST00000409769 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
CLK1-203ENST00000409769 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
CLK1-203ENST00000409769 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
CLK1-203ENST00000409769 TRAV8-4A0A0B4J246 113 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms