RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SMIM1B2RUZ4 78 aa19.6■□□□□ 0.73
TRAF3IP1-203ENST00000409739 NDUFA6P56556 154 aa19.6■□□□□ 0.73
TRAF3IP1-203ENST00000409739 TRBV30A0A0K0K1B3 111 aa19.59■□□□□ 0.73
TRAF3IP1-203ENST00000409739 TLX1NBP0CAT3 122 aa19.59■□□□□ 0.73
TRAF3IP1-203ENST00000409739 IGLC3P0DOY3 106 aa19.58■□□□□ 0.72
TRAF3IP1-203ENST00000409739 BAGE3Q86Y29 109 aa19.58■□□□□ 0.72
TRAF3IP1-203ENST00000409739 C6orf226Q5I0X4 101 aa19.57■□□□□ 0.72
TRAF3IP1-203ENST00000409739 MYCBP2O75592 4640 aa19.57■□□□□ 0.72
TRAF3IP1-203ENST00000409739 SCO1O75880 301 aa19.56■□□□□ 0.72
TRAF3IP1-203ENST00000409739 CKS1BP61024 79 aa19.56■□□□□ 0.72
TRAF3IP1-203ENST00000409739 C7orf33Q8WU49 177 aa19.56■□□□□ 0.72
TRAF3IP1-203ENST00000409739 Q6ZRP5 223 aa19.55■□□□□ 0.72
TRAF3IP1-203ENST00000409739 A0A1W2PNN7 141 aa19.53■□□□□ 0.72
TRAF3IP1-203ENST00000409739 HSBP1O75506 76 aa19.53■□□□□ 0.72
TRAF3IP1-203ENST00000409739 SPINK8P0C7L1 97 aa19.53■□□□□ 0.72
TRAF3IP1-203ENST00000409739 C9orf116Q5BN46 136 aaPredicted RBP19.52■□□□□ 0.72
TRAF3IP1-203ENST00000409739 LINC00310P59036 64 aa19.51■□□□□ 0.71
TRAF3IP1-203ENST00000409739 FAM19A2Q8N3H0 131 aa19.51■□□□□ 0.71
TRAF3IP1-203ENST00000409739 PKHD1L1Q86WI1 4243 aa19.5■□□□□ 0.71
TRAF3IP1-203ENST00000409739 H3BRM9 83 aa19.5■□□□□ 0.71
TRAF3IP1-203ENST00000409739 COX7B2Q8TF08 81 aa19.5■□□□□ 0.71
TRAF3IP1-203ENST00000409739 ZNF22P17026 224 aaPredicted RBP19.49■□□□□ 0.71
TRAF3IP1-203ENST00000409739 CXCL5P42830 114 aa19.49■□□□□ 0.71
TRAF3IP1-203ENST00000409739 HNRNPA3P51991 378 aaKnown RBP19.49■□□□□ 0.71
TRAF3IP1-203ENST00000409739 IFI27L1Q96BM0 104 aa19.49■□□□□ 0.71
TRAF3IP1-203ENST00000409739 NDUFC2-KCTD14E9PQ53 114 aa19.48■□□□□ 0.71
TRAF3IP1-203ENST00000409739 F8VRH5 84 aa19.48■□□□□ 0.71
TRAF3IP1-203ENST00000409739 SERF1AO75920 110 aa19.48■□□□□ 0.71
TRAF3IP1-203ENST00000409739 GAGE2EQ4V326 116 aa19.48■□□□□ 0.71
TRAF3IP1-203ENST00000409739 GAGE2DQ9UEU5 116 aa19.48■□□□□ 0.71
TRAF3IP1-203ENST00000409739 C11orf86A6NJI1 115 aa19.46■□□□□ 0.71
TRAF3IP1-203ENST00000409739 CHTOPQ9Y3Y2 248 aaKnown RBP19.44■□□□□ 0.7
TRAF3IP1-203ENST00000409739 TRAV12-1A0A0B4J245 112 aa19.43■□□□□ 0.7
TRAF3IP1-203ENST00000409739 IGLV5-39A0A0G2JS06 123 aa19.43■□□□□ 0.7
TRAF3IP1-203ENST00000409739 FAM168BA1KXE4 195 aa19.43■□□□□ 0.7
TRAF3IP1-203ENST00000409739 PRR3P79522 188 aaKnown RBP19.42■□□□□ 0.7
TRAF3IP1-203ENST00000409739 DMBT1Q9UGM3 2413 aaPredicted RBP19.42■□□□□ 0.7
TRAF3IP1-203ENST00000409739 NUPR1O60356 82 aa19.4■□□□□ 0.7
TRAF3IP1-203ENST00000409739 C9orf129Q5T035 196 aaKnown RBP19.39■□□□□ 0.69
TRAF3IP1-203ENST00000409739 TMEM170BQ5T4T1 132 aa19.39■□□□□ 0.69
TRAF3IP1-203ENST00000409739 PHF5AQ7RTV0 110 aaKnown RBP19.38■□□□□ 0.69
TRAF3IP1-203ENST00000409739 FAM19A5Q7Z5A7 132 aaPredicted RBP19.37■□□□□ 0.69
TRAF3IP1-203ENST00000409739 LEPROTL1O95214 131 aa19.36■□□□□ 0.69
TRAF3IP1-203ENST00000409739 KRTAP7-1Q8IUC3 87 aa19.36■□□□□ 0.69
TRAF3IP1-203ENST00000409739 HIST1H2BKO60814 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BJP06899 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BOP23527 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BBP33778 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BDP58876 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BCP62807 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST2H2BEQ16778 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BHQ93079 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BNQ99877 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HIST1H2BMQ99879 126 aa19.33■□□□□ 0.68
TRAF3IP1-203ENST00000409739 LRP1Q07954 4544 aaKnown RBP19.32■□□□□ 0.68
TRAF3IP1-203ENST00000409739 KRTAP29-1A8MX34 341 aaPredicted RBP19.32■□□□□ 0.68
TRAF3IP1-203ENST00000409739 XAGE1AQ9HD64 81 aa19.31■□□□□ 0.68
TRAF3IP1-203ENST00000409739 H0Y8G0 127 aa19.3■□□□□ 0.68
TRAF3IP1-203ENST00000409739 ODF1Q14990 250 aa19.3■□□□□ 0.68
TRAF3IP1-203ENST00000409739 M0QXV9 152 aa19.29■□□□□ 0.68
TRAF3IP1-203ENST00000409739 HSPB8Q9UJY1 196 aa19.29■□□□□ 0.68
TRAF3IP1-203ENST00000409739 TMEM223A0PJW6 202 aa19.28■□□□□ 0.68
TRAF3IP1-203ENST00000409739 FABP4P15090 132 aa19.28■□□□□ 0.68
TRAF3IP1-203ENST00000409739 FAT3Q8TDW7 4589 aa19.27■□□□□ 0.68
TRAF3IP1-203ENST00000409739 PSORS1C2Q9UIG4 136 aa19.27■□□□□ 0.68
TRAF3IP1-203ENST00000409739 J3QL48 77 aa19.25■□□□□ 0.67
TRAF3IP1-203ENST00000409739 SERTAD4-AS1Q5TG53 156 aa19.25■□□□□ 0.67
TRAF3IP1-203ENST00000409739 OXTP01178 125 aa19.24■□□□□ 0.67
TRAF3IP1-203ENST00000409739 KRTAP11-1Q8IUC1 163 aa19.23■□□□□ 0.67
TRAF3IP1-203ENST00000409739 ZNF625Q96I27 306 aaPredicted RBP19.21■□□□□ 0.67
TRAF3IP1-203ENST00000409739 SFTA2Q6UW10 78 aa19.2■□□□□ 0.66
TRAF3IP1-203ENST00000409739 PFN2P35080 140 aa19.19■□□□□ 0.66
TRAF3IP1-203ENST00000409739 ERG28Q9UKR5 140 aa19.19■□□□□ 0.66
TRAF3IP1-203ENST00000409739 C1orf137Q5JT78 98 aa19.17■□□□□ 0.66
TRAF3IP1-203ENST00000409739 C22orf24Q9Y442 160 aa19.17■□□□□ 0.66
TRAF3IP1-203ENST00000409739 PLNP26678 52 aa19.16■□□□□ 0.66
TRAF3IP1-203ENST00000409739 UBE2BP63146 152 aa19.16■□□□□ 0.66
TRAF3IP1-203ENST00000409739 S100A1P23297 94 aa19.15■□□□□ 0.66
TRAF3IP1-203ENST00000409739 SRSF9Q13242 221 aaKnown RBP eCLIP19.15■□□□□ 0.66
TRAF3IP1-203ENST00000409739 SPINK6Q6UWN8 80 aa19.15■□□□□ 0.66
TRAF3IP1-203ENST00000409739 MAP1LC3CQ9BXW4 147 aa19.15■□□□□ 0.66
TRAF3IP1-203ENST00000409739 ATP6V1G1O75348 118 aa19.14■□□□□ 0.65
TRAF3IP1-203ENST00000409739 COX17Q14061 63 aa19.14■□□□□ 0.65
TRAF3IP1-203ENST00000409739 PMCHL2Q9BQD1 86 aa19.14■□□□□ 0.65
TRAF3IP1-203ENST00000409739 PLA2G2DQ9UNK4 145 aa19.14■□□□□ 0.65
TRAF3IP1-203ENST00000409739 HERC1Q15751 4861 aa19.14■□□□□ 0.65
TRAF3IP1-203ENST00000409739 DPM2O94777 84 aa19.13■□□□□ 0.65
TRAF3IP1-203ENST00000409739 TP73-AS1Q9UF72 201 aa19.13■□□□□ 0.65
TRAF3IP1-203ENST00000409739 COA6Q5JTJ3 125 aaKnown RBP19.1■□□□□ 0.65
TRAF3IP1-203ENST00000409739 SND1-IT1Q9HBX3 110 aa19.1■□□□□ 0.65
TRAF3IP1-203ENST00000409739 IGKCP01834 107 aa19.09■□□□□ 0.65
TRAF3IP1-203ENST00000409739 MRPL55Q7Z7F7 128 aaKnown RBP19.09■□□□□ 0.65
TRAF3IP1-203ENST00000409739 LBHQ53QV2 105 aaPredicted RBP19.08■□□□□ 0.64
TRAF3IP1-203ENST00000409739 IGLV5-37A0A075B6J1 123 aa19.07■□□□□ 0.64
TRAF3IP1-203ENST00000409739 IGLV7-43P04211 117 aa19.07■□□□□ 0.64
TRAF3IP1-203ENST00000409739 SYS1-DBNDD2H3BUS1 97 aa19.06■□□□□ 0.64
TRAF3IP1-203ENST00000409739 TSPEAR-AS2P59090 65 aa19.06■□□□□ 0.64
TRAF3IP1-203ENST00000409739 LEPROTO15243 131 aa19.05■□□□□ 0.64
TRAF3IP1-203ENST00000409739 NDUFA12Q9UI09 145 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 453.7 ms