RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
SCAMP4-202ENST00000409472 UBE2L6O14933 153 aa10.64□□□□□ -0.71
SCAMP4-202ENST00000409472 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
SCAMP4-202ENST00000409472 IGLV4-60A0A075B6I1 120 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 LST1O00453 97 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 PRSS2P07478 247 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
SCAMP4-202ENST00000409472 F5H768 121 aa10.62□□□□□ -0.71
SCAMP4-202ENST00000409472 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
SCAMP4-202ENST00000409472 A0A096LPF7 62 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 KIR2DL5BQ8NHK3 375 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 Q9H8V8 135 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 FBN1P35555 2871 aaKnown RBP10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 NDUFA1O15239 70 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 MIAQ16674 131 aa10.61□□□□□ -0.71
SCAMP4-202ENST00000409472 ATOX1O00244 68 aa10.6□□□□□ -0.71
SCAMP4-202ENST00000409472 TRACP01848 142 aa10.6□□□□□ -0.71
SCAMP4-202ENST00000409472 GYPEP15421 78 aa10.6□□□□□ -0.71
SCAMP4-202ENST00000409472 TMEM258P61165 79 aa10.6□□□□□ -0.71
SCAMP4-202ENST00000409472 ANK2Q01484 3957 aa10.59□□□□□ -0.71
SCAMP4-202ENST00000409472 STAB1Q9NY15 2570 aa10.58□□□□□ -0.71
SCAMP4-202ENST00000409472 C5orf38Q86SI9 138 aa10.58□□□□□ -0.72
SCAMP4-202ENST00000409472 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
SCAMP4-202ENST00000409472 CLEC2BQ92478 149 aa10.58□□□□□ -0.72
SCAMP4-202ENST00000409472 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
SCAMP4-202ENST00000409472 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
SCAMP4-202ENST00000409472 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
SCAMP4-202ENST00000409472 C2orf48Q96LS8 159 aa10.56□□□□□ -0.72
SCAMP4-202ENST00000409472 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
SCAMP4-202ENST00000409472 SMCR5Q8TEV8 140 aa10.55□□□□□ -0.72
SCAMP4-202ENST00000409472 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
SCAMP4-202ENST00000409472 PRIMA1Q86XR5 153 aa10.54□□□□□ -0.72
SCAMP4-202ENST00000409472 Q8N3U1 123 aa10.54□□□□□ -0.72
SCAMP4-202ENST00000409472 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
SCAMP4-202ENST00000409472 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
SCAMP4-202ENST00000409472 hADV29S1A0JD25 119 aa10.53□□□□□ -0.72
SCAMP4-202ENST00000409472 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
SCAMP4-202ENST00000409472 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
SCAMP4-202ENST00000409472 TIMM17BO60830 172 aa10.53□□□□□ -0.72
SCAMP4-202ENST00000409472 Q8NAQ8 132 aa10.53□□□□□ -0.72
SCAMP4-202ENST00000409472 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
SCAMP4-202ENST00000409472 APOC4P55056 127 aa10.52□□□□□ -0.73
SCAMP4-202ENST00000409472 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
SCAMP4-202ENST00000409472 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 PAX4O43316 350 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
SCAMP4-202ENST00000409472 TENM3Q9P273 2699 aa10.5□□□□□ -0.73
SCAMP4-202ENST00000409472 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
SCAMP4-202ENST00000409472 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
SCAMP4-202ENST00000409472 DAD1P61803 113 aa10.48□□□□□ -0.73
SCAMP4-202ENST00000409472 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
SCAMP4-202ENST00000409472 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
SCAMP4-202ENST00000409472 HTN3P15516 51 aa10.48□□□□□ -0.73
SCAMP4-202ENST00000409472 XCL1P47992 114 aa10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 C11orf68Q9H3H3 251 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 SERP2Q8N6R1 65 aa10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 RETNQ9HD89 108 aa10.47□□□□□ -0.73
SCAMP4-202ENST00000409472 KRTAP10-11P60412 298 aa10.46□□□□□ -0.73
SCAMP4-202ENST00000409472 COX7A2LO14548 114 aa10.46□□□□□ -0.74
SCAMP4-202ENST00000409472 C4orf26Q17RF5 130 aa10.46□□□□□ -0.74
SCAMP4-202ENST00000409472 HRCT1Q6UXD1 115 aa10.46□□□□□ -0.74
SCAMP4-202ENST00000409472 A0A087WZ39 114 aa10.45□□□□□ -0.74
SCAMP4-202ENST00000409472 Q5XG85 94 aa10.45□□□□□ -0.74
SCAMP4-202ENST00000409472 MIFP14174 115 aa10.44□□□□□ -0.74
SCAMP4-202ENST00000409472 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SCAMP4-202ENST00000409472 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 LINC00269Q8N2A0 174 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 MIR7-3HGQ8N6C7 128 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
SCAMP4-202ENST00000409472 UPK3BQ9BT76 320 aa10.42□□□□□ -0.74
SCAMP4-202ENST00000409472 OXTP01178 125 aa10.41□□□□□ -0.74
SCAMP4-202ENST00000409472 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
SCAMP4-202ENST00000409472 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
SCAMP4-202ENST00000409472 MALP21145 153 aa10.4□□□□□ -0.74
SCAMP4-202ENST00000409472 PFN2P35080 140 aa10.4□□□□□ -0.74
SCAMP4-202ENST00000409472 COPS9Q8WXC6 57 aa10.39□□□□□ -0.75
SCAMP4-202ENST00000409472 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
SCAMP4-202ENST00000409472 ANGP03950 147 aaKnown RBP10.39□□□□□ -0.75
SCAMP4-202ENST00000409472 LINC00158P58513 81 aa10.39□□□□□ -0.75
SCAMP4-202ENST00000409472 Q6JHZ5 121 aa10.39□□□□□ -0.75
SCAMP4-202ENST00000409472 DNAL4O96015 105 aa10.38□□□□□ -0.75
SCAMP4-202ENST00000409472 SS18Q15532 418 aa10.38□□□□□ -0.75
SCAMP4-202ENST00000409472 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
SCAMP4-202ENST00000409472 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
SCAMP4-202ENST00000409472 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms