RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 DEFB121Q5J5C9 76 aa9.5□□□□□ -0.89
COL6A2-204ENST00000409416 Q8N2B8 174 aa9.5□□□□□ -0.89
COL6A2-204ENST00000409416 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
COL6A2-204ENST00000409416 SMIM1B2RUZ4 78 aa9.49□□□□□ -0.89
COL6A2-204ENST00000409416 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
COL6A2-204ENST00000409416 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
COL6A2-204ENST00000409416 LST1O00453 97 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 DNAL4O96015 105 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 TIRAPP58753 221 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 RNF152Q8N8N0 203 aa9.48□□□□□ -0.89
COL6A2-204ENST00000409416 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
COL6A2-204ENST00000409416 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
COL6A2-204ENST00000409416 FSHBP01225 129 aa9.47□□□□□ -0.89
COL6A2-204ENST00000409416 CRPP02741 224 aa9.46□□□□□ -0.89
COL6A2-204ENST00000409416 AKAP9Q99996 3911 aa9.46□□□□□ -0.89
COL6A2-204ENST00000409416 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.9
COL6A2-204ENST00000409416 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.9
COL6A2-204ENST00000409416 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.9
COL6A2-204ENST00000409416 H3BT86 120 aa9.46□□□□□ -0.9
COL6A2-204ENST00000409416 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
COL6A2-204ENST00000409416 CDC42SE2Q9NRR3 84 aa9.45□□□□□ -0.9
COL6A2-204ENST00000409416 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
COL6A2-204ENST00000409416 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
COL6A2-204ENST00000409416 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
COL6A2-204ENST00000409416 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
COL6A2-204ENST00000409416 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
COL6A2-204ENST00000409416 TRACP01848 142 aa9.44□□□□□ -0.9
COL6A2-204ENST00000409416 KRTAP10-3P60369 221 aa9.44□□□□□ -0.9
COL6A2-204ENST00000409416 NCR3O14931 201 aa9.43□□□□□ -0.9
COL6A2-204ENST00000409416 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
COL6A2-204ENST00000409416 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
COL6A2-204ENST00000409416 COX7B2Q8TF08 81 aa9.43□□□□□ -0.9
COL6A2-204ENST00000409416 A8MTW9 85 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 COX7A2LO14548 114 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 TIMM17BO60830 172 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 TRBV10-1A0A0K0K1A3 114 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
COL6A2-204ENST00000409416 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
COL6A2-204ENST00000409416 HILS1P60008 231 aa9.41□□□□□ -0.9
COL6A2-204ENST00000409416 XAGE1AQ9HD64 81 aa9.41□□□□□ -0.9
COL6A2-204ENST00000409416 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
COL6A2-204ENST00000409416 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
COL6A2-204ENST00000409416 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
COL6A2-204ENST00000409416 TRBV6-8A0A0A6YYG3 113 aa9.4□□□□□ -0.9
COL6A2-204ENST00000409416 SS18Q15532 418 aa9.4□□□□□ -0.9
COL6A2-204ENST00000409416 FAM218AQ96MZ4 157 aa9.4□□□□□ -0.9
COL6A2-204ENST00000409416 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
COL6A2-204ENST00000409416 IGHV4-28A0A0C4DH34 117 aa9.4□□□□□ -0.91
COL6A2-204ENST00000409416 UQCRQO14949 82 aa9.4□□□□□ -0.91
COL6A2-204ENST00000409416 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.91
COL6A2-204ENST00000409416 Q6Q795 121 aa9.39□□□□□ -0.91
COL6A2-204ENST00000409416 LECT2O14960 151 aa9.39□□□□□ -0.91
COL6A2-204ENST00000409416 FHL2Q14192 279 aa9.38□□□□□ -0.91
COL6A2-204ENST00000409416 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
COL6A2-204ENST00000409416 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
COL6A2-204ENST00000409416 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
COL6A2-204ENST00000409416 IGKV3D-7A0A0C4DH55 119 aa9.37□□□□□ -0.91
COL6A2-204ENST00000409416 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
COL6A2-204ENST00000409416 A0A1B0GX51 115 aa9.37□□□□□ -0.91
COL6A2-204ENST00000409416 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
COL6A2-204ENST00000409416 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
COL6A2-204ENST00000409416 TRAV13-2A0A0B4J235 113 aa9.35□□□□□ -0.91
COL6A2-204ENST00000409416 HIST1H4AP62805 103 aaKnown RBP9.35□□□□□ -0.91
COL6A2-204ENST00000409416 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
COL6A2-204ENST00000409416 PRO0255Q9UI72 69 aa9.35□□□□□ -0.91
COL6A2-204ENST00000409416 TMEM86BQ8N661 226 aa9.34□□□□□ -0.91
COL6A2-204ENST00000409416 SMIM11BQ8TCY0 68 aa9.34□□□□□ -0.91
COL6A2-204ENST00000409416 A0A087WYN8 130 aa9.34□□□□□ -0.91
COL6A2-204ENST00000409416 CCL18P55774 89 aa9.33□□□□□ -0.92
COL6A2-204ENST00000409416 SDIM1Q6ZPB5 146 aa9.33□□□□□ -0.92
COL6A2-204ENST00000409416 LINC00959A0A1B0GUT2 108 aa9.33□□□□□ -0.92
COL6A2-204ENST00000409416 IGHV4-30-4P0DP06 118 aa9.33□□□□□ -0.92
COL6A2-204ENST00000409416 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
COL6A2-204ENST00000409416 TRBV6-4A0A1B0GX49 114 aa9.33□□□□□ -0.92
COL6A2-204ENST00000409416 PLAC8L1A1L4L8 177 aa9.32□□□□□ -0.92
COL6A2-204ENST00000409416 REG3AQ06141 175 aa9.32□□□□□ -0.92
COL6A2-204ENST00000409416 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
COL6A2-204ENST00000409416 IGKV2D-24A0A075B6R9 120 aa9.32□□□□□ -0.92
COL6A2-204ENST00000409416 RPL18AQ02543 176 aaKnown RBP9.32□□□□□ -0.92
COL6A2-204ENST00000409416 C9orf66Q5T8R8 295 aa9.31□□□□□ -0.92
COL6A2-204ENST00000409416 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
COL6A2-204ENST00000409416 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
COL6A2-204ENST00000409416 COX7CP15954 63 aa9.3□□□□□ -0.92
COL6A2-204ENST00000409416 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
COL6A2-204ENST00000409416 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
COL6A2-204ENST00000409416 LAMTOR3Q9UHA4 124 aa9.29□□□□□ -0.92
COL6A2-204ENST00000409416 CMC4P56277 68 aaPredicted RBP9.29□□□□□ -0.92
COL6A2-204ENST00000409416 IGHV3OR16-9A0A0B4J2B5 98 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 APOC4P55056 127 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
COL6A2-204ENST00000409416 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 A0A087WVE0 104 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
COL6A2-204ENST00000409416 DEFB105AQ8NG35 78 aa9.28□□□□□ -0.92
COL6A2-204ENST00000409416 INAFM2P0DMQ5 153 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms