RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 NDUFA1O15239 70 aa21.57■■□□□ 1.04
CSNK1E-204ENST00000403904 CDPF1Q6NVV7 123 aa21.57■■□□□ 1.04
CSNK1E-204ENST00000403904 CARD19Q96LW7 228 aa21.57■■□□□ 1.04
CSNK1E-204ENST00000403904 EPPK1P58107 5090 aaKnown RBP21.56■■□□□ 1.04
CSNK1E-204ENST00000403904 AKR1D1P51857 326 aa21.56■■□□□ 1.04
CSNK1E-204ENST00000403904 F8WDY8 70 aa21.54■■□□□ 1.04
CSNK1E-204ENST00000403904 C9orf163Q8N9P6 203 aa21.54■■□□□ 1.04
CSNK1E-204ENST00000403904 LEPROTO15243 131 aa21.52■■□□□ 1.04
CSNK1E-204ENST00000403904 CXCL5P42830 114 aa21.51■■□□□ 1.03
CSNK1E-204ENST00000403904 E9PLD3 99 aa21.5■■□□□ 1.03
CSNK1E-204ENST00000403904 C6orf48Q9UBA6 75 aa21.5■■□□□ 1.03
CSNK1E-204ENST00000403904 TSPEAR-AS2P59090 65 aa21.49■■□□□ 1.03
CSNK1E-204ENST00000403904 GCSHP23434 173 aa21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 JOSD1Q15040 202 aaPredicted RBP21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 PLEKHB2Q96CS7 222 aa21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 DYNC1H1Q14204 4646 aaKnown RBP21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 C16orf90A8MZG2 172 aa21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 MAJINQ3KP22 176 aa21.48■■□□□ 1.03
CSNK1E-204ENST00000403904 J3QQQ9 107 aa21.47■■□□□ 1.03
CSNK1E-204ENST00000403904 ANKRD39Q53RE8 183 aa21.45■■□□□ 1.02
CSNK1E-204ENST00000403904 C9orf116Q5BN46 136 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-204ENST00000403904 TRBV30A0A0K0K1B3 111 aa21.44■■□□□ 1.02
CSNK1E-204ENST00000403904 LRP1BQ9NZR2 4599 aa21.44■■□□□ 1.02
CSNK1E-204ENST00000403904 IGKV2D-26A0A0A0MRZ7 120 aa21.44■■□□□ 1.02
CSNK1E-204ENST00000403904 RNF151Q2KHN1 245 aa21.44■■□□□ 1.02
CSNK1E-204ENST00000403904 ZNF625Q96I27 306 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-204ENST00000403904 LGALS3P17931 250 aaKnown RBP21.42■■□□□ 1.02
CSNK1E-204ENST00000403904 NDUFA12Q9UI09 145 aa21.42■■□□□ 1.02
CSNK1E-204ENST00000403904 KRTAP10-1P60331 282 aa21.41■■□□□ 1.02
CSNK1E-204ENST00000403904 PYY3Q5JQD4 70 aa21.41■■□□□ 1.02
CSNK1E-204ENST00000403904 SDIM1Q6ZPB5 146 aa21.41■■□□□ 1.02
CSNK1E-204ENST00000403904 HSBP1L1C9JCN9 74 aa21.39■■□□□ 1.01
CSNK1E-204ENST00000403904 SFTA2Q6UW10 78 aa21.38■■□□□ 1.01
CSNK1E-204ENST00000403904 NMUP48645 174 aa21.36■■□□□ 1.01
CSNK1E-204ENST00000403904 MYMXA0A1B0GTQ4 84 aa21.36■■□□□ 1.01
CSNK1E-204ENST00000403904 TTTY13Q9BZ97 58 aa21.36■■□□□ 1.01
CSNK1E-204ENST00000403904 LOC107984640A0A0U1RRK4 108 aa21.35■■□□□ 1.01
CSNK1E-204ENST00000403904 DNAH8Q96JB1 4490 aa21.34■■□□□ 1.01
CSNK1E-204ENST00000403904 RPL18AQ02543 176 aaKnown RBP21.33■■□□□ 1.01
CSNK1E-204ENST00000403904 NDUFC2-KCTD14E9PQ53 114 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 TLX1NBP0CAT3 122 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 PFN2P35080 140 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 HERV-K104P63124 156 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 Q6ZRP5 223 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 ERG28Q9UKR5 140 aa21.31■■□□□ 1
CSNK1E-204ENST00000403904 A0A096LNI7 61 aa21.3■■□□□ 1
CSNK1E-204ENST00000403904 GAGE2BQ13066 116 aa21.3■■□□□ 1
CSNK1E-204ENST00000403904 IGKV2-24A0A0C4DH68 120 aa21.29■■□□□ 1
CSNK1E-204ENST00000403904 LOC105371267A0A1B0GV96 52 aa21.29■■□□□ 1
CSNK1E-204ENST00000403904 CHTF8P0CG12 524 aa21.29■■□□□ 1
CSNK1E-204ENST00000403904 PKIGQ9Y2B9 76 aa21.29■■□□□ 1
CSNK1E-204ENST00000403904 FAM30AQ9NZY2 134 aa21.28■■□□□ 1
CSNK1E-204ENST00000403904 ZNF815PA8K554 130 aa21.27■■□□□ 1
CSNK1E-204ENST00000403904 PCP2Q8IVA1 136 aa21.27■■□□□ 1
CSNK1E-204ENST00000403904 PANO1I0J062 215 aa21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 GAGE2EQ4V326 116 aa21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 VAMP8Q9BV40 100 aa21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 GAGE2DQ9UEU5 116 aa21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 PAM16Q9Y3D7 125 aa21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP21.27■□□□□ 0.99
CSNK1E-204ENST00000403904 PTTG1IPP53801 180 aa21.26■□□□□ 0.99
CSNK1E-204ENST00000403904 MEIG1Q5JSS6 88 aa21.26■□□□□ 0.99
CSNK1E-204ENST00000403904 A0A0U1RRA0 63 aa21.25■□□□□ 0.99
CSNK1E-204ENST00000403904 COX17Q14061 63 aa21.23■□□□□ 0.99
CSNK1E-204ENST00000403904 SMIM13P0DJ93 91 aa21.23■□□□□ 0.99
CSNK1E-204ENST00000403904 A0A0J9YXY3 114 aa21.22■□□□□ 0.99
CSNK1E-204ENST00000403904 LINC00158P58513 81 aa21.22■□□□□ 0.99
CSNK1E-204ENST00000403904 SPATA45Q537H7 98 aa21.22■□□□□ 0.99
CSNK1E-204ENST00000403904 Q6ZSA8 131 aa21.22■□□□□ 0.99
CSNK1E-204ENST00000403904 APOBP04114 4563 aaKnown RBP21.2■□□□□ 0.98
CSNK1E-204ENST00000403904 SPACA4Q8TDM5 124 aa21.19■□□□□ 0.98
CSNK1E-204ENST00000403904 DPH3Q96FX2 82 aa21.19■□□□□ 0.98
CSNK1E-204ENST00000403904 XAGE1AQ9HD64 81 aa21.19■□□□□ 0.98
CSNK1E-204ENST00000403904 LINC00587B1AMM8 73 aa21.18■□□□□ 0.98
CSNK1E-204ENST00000403904 CIRBPQ14011 172 aaKnown RBP21.18■□□□□ 0.98
CSNK1E-204ENST00000403904 LINC00474Q9P2X8 69 aa21.18■□□□□ 0.98
CSNK1E-204ENST00000403904 HAMPP81172 84 aa21.14■□□□□ 0.98
CSNK1E-204ENST00000403904 C9orf129Q5T035 196 aaKnown RBP21.14■□□□□ 0.98
CSNK1E-204ENST00000403904 SCGB1D4Q6XE38 83 aa21.13■□□□□ 0.97
CSNK1E-204ENST00000403904 MIR7-3HGQ8N6C7 128 aa21.13■□□□□ 0.97
CSNK1E-204ENST00000403904 DAND5Q8N907 189 aa21.12■□□□□ 0.97
CSNK1E-204ENST00000403904 C14orf144Q96I85 54 aa21.12■□□□□ 0.97
CSNK1E-204ENST00000403904 SND1-IT1Q9HBX3 110 aa21.12■□□□□ 0.97
CSNK1E-204ENST00000403904 TP73-AS1Q9UF72 201 aa21.12■□□□□ 0.97
CSNK1E-204ENST00000403904 COX8AP10176 69 aa21.11■□□□□ 0.97
CSNK1E-204ENST00000403904 A0A087WYN8 130 aa21.1■□□□□ 0.97
CSNK1E-204ENST00000403904 ADAMTSL4-AS1Q5T5F5 129 aa21.1■□□□□ 0.97
CSNK1E-204ENST00000403904 SCXQ7RTU7 201 aa21.09■□□□□ 0.97
CSNK1E-204ENST00000403904 FAM168BA1KXE4 195 aa21.08■□□□□ 0.97
CSNK1E-204ENST00000403904 SMIM6P0DI80 62 aa21.08■□□□□ 0.97
CSNK1E-204ENST00000403904 BOD1L2Q8IYS8 172 aa21.08■□□□□ 0.97
CSNK1E-204ENST00000403904 CIRBP-AS1Q8TBR5 109 aa21.08■□□□□ 0.97
CSNK1E-204ENST00000403904 LITAFQ99732 161 aa21.08■□□□□ 0.97
CSNK1E-204ENST00000403904 BIRC6Q9NR09 4857 aa21.07■□□□□ 0.96
CSNK1E-204ENST00000403904 XGP55808 180 aa21.07■□□□□ 0.96
CSNK1E-204ENST00000403904 S100A12P80511 92 aa21.07■□□□□ 0.96
CSNK1E-204ENST00000403904 A0A1W2PNN7 141 aa21.06■□□□□ 0.96
CSNK1E-204ENST00000403904 TIMM17BO60830 172 aa21.06■□□□□ 0.96
CSNK1E-204ENST00000403904 PLAC8Q9NZF1 115 aa21.02■□□□□ 0.96
CSNK1E-204ENST00000403904 KIAA1109Q2LD37 5005 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms