RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 I3L2K1 104 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 Q8IZM0 81 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 KRTAP2-1Q9BYU5 128 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 MYO18BQ8IUG5 2567 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 SPTBN4Q9H254 2564 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 ANKRD17O75179 2603 aaKnown RBP0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 KALRNO60229 2985 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 F5P12259 2224 aa0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 CLTCQ00610 1675 aaKnown RBP0.56□□□□□ -2.32
HMGB1P17-201ENST00000403495 CEP162Q5TB80 1403 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 EDC4Q6P2E9 1401 aaKnown RBP0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 BTAF1O14981 1849 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 ACACBO00763 2458 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 RB1CC1Q8TDY2 1594 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 MYO9AB2RTY4 2548 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 FXYD6-FXYD2A0A087WZ82 144 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 LINC00959A0A1B0GUT2 108 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 H0Y9P7 68 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 K7EP34 96 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 GNGT1P63211 74 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 HMGN3Q15651 99 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 USP9YO00507 2555 aaPredicted RBP0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 RYR1P21817 5038 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 NBEAL2Q6ZNJ1 2754 aa0.55□□□□□ -2.32
HMGB1P17-201ENST00000403495 ABCA1O95477 2261 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 ABCC3O15438 1527 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 TULP4Q9NRJ4 1543 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 TCHHQ07283 1943 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 BIVM-ERCC5R4GMW8 1640 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 ZFYVE26Q68DK2 2539 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 TNRC18O15417 2968 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 SMIM11AP58511 58 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 PEA15Q15121 130 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 PYY3Q5JQD4 70 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 C6orf201Q7Z4U5 140 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 MON2Q7Z3U7 1717 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 WNK3Q9BYP7 1800 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 SRCAPQ6ZRS2 3230 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
HMGB1P17-201ENST00000403495 PAPPAQ13219 1627 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 A0A1B0GU69 56 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 D6R8Y8 96 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 Q5BKY6 102 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 MUSTN1Q8IVN3 82 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 CEP295Q9C0D2 2601 aa0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 KMT2CQ8NEZ4 4911 aaKnown RBP0.53□□□□□ -2.32
HMGB1P17-201ENST00000403495 XRN1Q8IZH2 1706 aaKnown RBP0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 ATRQ13535 2644 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 MED13LQ71F56 2210 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 SONP18583 2426 aaKnown RBP0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 CYB5AP00167 134 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 ALKAL2Q6UX46 152 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 S100A16Q96FQ6 103 aaKnown RBP0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 BSNQ9UPA5 3926 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 GCN1Q92616 2671 aaKnown RBP0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 NSD1Q96L73 2696 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 APCP25054 2843 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 NEBP20929 6669 aa0.52□□□□□ -2.33
HMGB1P17-201ENST00000403495 POLQO75417 2590 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 KMT2DO14686 5537 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 CFDP00746 253 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 HMGN2P05204 90 aaKnown RBP0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 C2CD3Q4AC94 2353 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 KNDC1Q76NI1 1749 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 DEFB123Q8N688 67 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 MYO3AQ8NEV4 1616 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 RYR2Q92736 4967 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 PLIN4Q96Q06 1357 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 SETBP1Q9Y6X0 1596 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
HMGB1P17-201ENST00000403495 GVINP1Q7Z2Y8 2422 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 PI4KAP42356 2102 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 A0A0G2JMZ2 1700 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 CUX1P39880 1505 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 WFDC2Q14508 124 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 CEP350Q5VT06 3117 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 ABCA13Q86UQ4 5058 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 CFAP46Q8IYW2 2715 aa0.5□□□□□ -2.33
HMGB1P17-201ENST00000403495 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 TARBP1Q13395 1621 aaKnown RBP0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 NHSL1Q5SYE7 1610 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 AKAP13Q12802 2813 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 SPINK1P00995 79 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 SYNE2Q8WXH0 6885 aaKnown RBP0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 PLXNB2O15031 1838 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 SPG11Q96JI7 2443 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 KIAA1551Q9HCM1 1747 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 PDZD2O15018 2839 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 PKD1L1Q8TDX9 2849 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 TENM4Q6N022 2769 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 RYR3Q15413 4870 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms