RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 PDCD11Q14690 1871 aaKnown RBP-0.05□□□□□ -2.42
CBX3P9-201ENST00000402326 MPC2O95563 127 aa-0.06□□□□□ -2.42
CBX3P9-201ENST00000402326 MLH3Q9UHC1 1453 aa-0.06□□□□□ -2.42
CBX3P9-201ENST00000402326 KIAA0556O60303 1618 aa-0.06□□□□□ -2.42
CBX3P9-201ENST00000402326 ANKRD36BQ8N2N9 1353 aa-0.06□□□□□ -2.42
CBX3P9-201ENST00000402326 CACNA1AO00555 2505 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 PRDM15P57071 1507 aaPredicted RBP-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 PSMG4Q5JS54 123 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 DEFB107AQ8IZN7 70 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 VAMP8Q9BV40 100 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 LINC00846Q9NV44 126 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 AP4S1Q9Y587 144 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 MYCBP2O75592 4640 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 PAPPA2Q9BXP8 1791 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 SETBP1Q9Y6X0 1596 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 KNDC1Q76NI1 1749 aa-0.07□□□□□ -2.42
CBX3P9-201ENST00000402326 HMCN2Q8NDA2 5059 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 TRBV25-1A0A075B6N4 114 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 A0A1B0GU69 56 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 H7BZZ5 65 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 NDUFC1O43677 76 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 KLK9Q2XQG4 91 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 NCMAPQ5T1S8 102 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 GOLGA4Q13439 2230 aaKnown RBP-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 A0A0G2JMZ2 1700 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 MUC2Q02817 5179 aa-0.08□□□□□ -2.42
CBX3P9-201ENST00000402326 RYR3Q15413 4870 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 FMN2Q9NZ56 1722 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 SYS1-DBNDD2H3BUS1 97 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 PMCHL1Q16048 86 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 C6orf201Q7Z4U5 140 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 TRGV9Q99603 122 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 VWFP04275 2813 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 NSD1Q96L73 2696 aaPredicted RBP-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 LPAP08519 4548 aa-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
CBX3P9-201ENST00000402326 FYCO1Q9BQS8 1478 aa-0.1□□□□□ -2.42
CBX3P9-201ENST00000402326 MARF1Q9Y4F3 1742 aaKnown RBP-0.1□□□□□ -2.42
CBX3P9-201ENST00000402326 HSPG2P98160 4391 aa-0.1□□□□□ -2.42
CBX3P9-201ENST00000402326 TNXBP22105 4242 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 H3BQF6 201 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 ATOX1O00244 68 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 UQCRHP07919 91 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 ACBD7Q8N6N7 88 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 DEFB105AQ8NG35 78 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 CRIPTQ9P021 101 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 SPTBN1Q01082 2364 aaKnown RBP-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 NRXN1Q9ULB1 1477 aa-0.1□□□□□ -2.43
CBX3P9-201ENST00000402326 KMT2AQ03164 3969 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 CHD6Q8TD26 2715 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 FAT2Q9NYQ8 4349 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 TARBP1Q13395 1621 aaKnown RBP-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 H0Y9P7 68 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 GNGT1P63211 74 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 SERP2Q8N6R1 65 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 USMG5Q96IX5 58 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 UBR4Q5T4S7 5183 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 FLNCQ14315 2725 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 PIEZO2Q9H5I5 2752 aa-0.11□□□□□ -2.43
CBX3P9-201ENST00000402326 PTPN13Q12923 2485 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 LOC730098B7Z3J9 87 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 M0R143 59 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 ARMS2P0C7Q2 107 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 COX8AP10176 69 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 FAUP35544 74 aaKnown RBP-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 COL5A1-AS1Q5SY13 56 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 DPY30Q9C005 99 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 APLNQ9ULZ1 77 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 GVINP1Q7Z2Y8 2422 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 TEX14Q8IWB6 1497 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 RAPGEF2Q9Y4G8 1499 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 KIAA1109Q2LD37 5005 aa-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
CBX3P9-201ENST00000402326 SLIT1O75093 1534 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 SHPRHQ149N8 1683 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 ABCC10Q5T3U5 1492 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 LINC00032P0C843 101 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 CSPG4Q6UVK1 2322 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 MON2Q7Z3U7 1717 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 EDC4Q6P2E9 1401 aaKnown RBP-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 RYR1P21817 5038 aa-0.13□□□□□ -2.43
CBX3P9-201ENST00000402326 HYDINQ4G0P3 5121 aa-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 EPPK1P58107 5090 aaKnown RBP-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 CPSF4LA6NMK7 179 aaKnown RBP-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 SPINK4O60575 86 aa-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 TEP1Q99973 2627 aaKnown RBP-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 C5P01031 1676 aa-0.14□□□□□ -2.43
CBX3P9-201ENST00000402326 ANKRD36A6QL64 1941 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 NKTRP30414 1462 aaKnown RBP-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 PKD1L1Q8TDX9 2849 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 UQCRHLA0A096LP55 91 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 ETDBQ3ZM63 59 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 PSENENQ9NZ42 101 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 CUX1P39880 1505 aa-0.15□□□□□ -2.43
CBX3P9-201ENST00000402326 HIVEP1P15822 2718 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms