RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
LSS-202ENST00000397728 Q8IZM0 81 aa10.87□□□□□ -0.67
LSS-202ENST00000397728 RPL37AP8A6NKH3 93 aa10.86□□□□□ -0.67
LSS-202ENST00000397728 TP73-AS1Q9UF72 201 aa10.86□□□□□ -0.67
LSS-202ENST00000397728 LINC00474Q9P2X8 69 aa10.86□□□□□ -0.67
LSS-202ENST00000397728 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
LSS-202ENST00000397728 PTH2Q96A98 100 aa10.85□□□□□ -0.67
LSS-202ENST00000397728 H3BT86 120 aa10.85□□□□□ -0.67
LSS-202ENST00000397728 NDUFB1O75438 58 aa10.84□□□□□ -0.67
LSS-202ENST00000397728 WFDC2Q14508 124 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 H3BQ85 93 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 C9orf116Q5BN46 136 aaPredicted RBP10.83□□□□□ -0.68
LSS-202ENST00000397728 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
LSS-202ENST00000397728 NREPQ16612 68 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 ESRGQ1W209 222 aa10.83□□□□□ -0.68
LSS-202ENST00000397728 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
LSS-202ENST00000397728 M0R378 163 aa10.82□□□□□ -0.68
LSS-202ENST00000397728 A0A1B0GUV1 79 aa10.82□□□□□ -0.68
LSS-202ENST00000397728 TMEM256-PLSCR3K7ERE1 68 aa10.82□□□□□ -0.68
LSS-202ENST00000397728 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 C5orf47Q569G3 176 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 SPATA3Q8NHX4 192 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 MUC7Q8TAX7 377 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 EGFEM1PQ0D2K5 195 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 COX6A2Q02221 97 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 FAM19A4Q96LR4 140 aa10.81□□□□□ -0.68
LSS-202ENST00000397728 POM121L12Q8N7R1 296 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
LSS-202ENST00000397728 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
LSS-202ENST00000397728 KLK9Q2XQG4 91 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 K7EIL1 84 aa10.8□□□□□ -0.68
LSS-202ENST00000397728 Q8NAQ8 132 aa10.79□□□□□ -0.68
LSS-202ENST00000397728 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
LSS-202ENST00000397728 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
LSS-202ENST00000397728 M0QXV9 152 aa10.78□□□□□ -0.68
LSS-202ENST00000397728 PLAC8L1A1L4L8 177 aa10.78□□□□□ -0.68
LSS-202ENST00000397728 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
LSS-202ENST00000397728 SVIPQ8NHG7 77 aa10.78□□□□□ -0.68
LSS-202ENST00000397728 COX17Q14061 63 aa10.77□□□□□ -0.68
LSS-202ENST00000397728 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
LSS-202ENST00000397728 SLPIP03973 132 aa10.77□□□□□ -0.69
LSS-202ENST00000397728 TIMM17BO60830 172 aa10.76□□□□□ -0.69
LSS-202ENST00000397728 FLNCQ14315 2725 aa10.76□□□□□ -0.69
LSS-202ENST00000397728 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
LSS-202ENST00000397728 FRYLO94915 3013 aa10.76□□□□□ -0.69
LSS-202ENST00000397728 TNRC18O15417 2968 aaPredicted RBP10.75□□□□□ -0.69
LSS-202ENST00000397728 H0Y9J4 135 aa10.75□□□□□ -0.69
LSS-202ENST00000397728 LINC00643Q86TS7 51 aa10.75□□□□□ -0.69
LSS-202ENST00000397728 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
LSS-202ENST00000397728 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
LSS-202ENST00000397728 UQCRQO14949 82 aa10.74□□□□□ -0.69
LSS-202ENST00000397728 AMELXQ99217 191 aa10.74□□□□□ -0.69
LSS-202ENST00000397728 LINC01556Q5JQF7 62 aa10.74□□□□□ -0.69
LSS-202ENST00000397728 LINC00310P59036 64 aa10.73□□□□□ -0.69
LSS-202ENST00000397728 Q9UF83 564 aa10.73□□□□□ -0.69
LSS-202ENST00000397728 NTM-AS1Q6ZSK4 140 aa10.72□□□□□ -0.69
LSS-202ENST00000397728 VCANP13611 3396 aa10.72□□□□□ -0.69
LSS-202ENST00000397728 ZNF73O43830 326 aaPredicted RBP10.72□□□□□ -0.69
LSS-202ENST00000397728 Q6ZQY7 126 aa10.72□□□□□ -0.69
LSS-202ENST00000397728 C14orf132Q9NPU4 83 aa10.72□□□□□ -0.69
LSS-202ENST00000397728 TCL1BO95988 128 aa10.72□□□□□ -0.69
LSS-202ENST00000397728 LINC00315P59091 139 aa10.71□□□□□ -0.69
LSS-202ENST00000397728 ZNF706Q9Y5V0 76 aaPredicted RBP10.71□□□□□ -0.69
LSS-202ENST00000397728 IMUPQ9GZP8 106 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 NDUFC2-KCTD14E9PQ53 114 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 H3BNG1 76 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 TRIAP1O43715 76 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
LSS-202ENST00000397728 A0A1B0GX51 115 aa10.69□□□□□ -0.7
LSS-202ENST00000397728 PDE6GP18545 87 aa10.69□□□□□ -0.7
LSS-202ENST00000397728 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
LSS-202ENST00000397728 Q6ZRU5 148 aa10.69□□□□□ -0.7
LSS-202ENST00000397728 LAMA1P25391 3075 aa10.68□□□□□ -0.7
LSS-202ENST00000397728 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
LSS-202ENST00000397728 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
LSS-202ENST00000397728 C2orf48Q96LS8 159 aa10.68□□□□□ -0.7
LSS-202ENST00000397728 A0A096LNJ9 63 aa10.68□□□□□ -0.7
LSS-202ENST00000397728 RPL28P46779 137 aaKnown RBP10.68□□□□□ -0.7
LSS-202ENST00000397728 Q6Q795 121 aa10.67□□□□□ -0.7
LSS-202ENST00000397728 SMIM11BQ8TCY0 68 aa10.67□□□□□ -0.7
LSS-202ENST00000397728 HRCT1Q6UXD1 115 aa10.67□□□□□ -0.7
LSS-202ENST00000397728 SPINK6Q6UWN8 80 aa10.66□□□□□ -0.7
LSS-202ENST00000397728 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
LSS-202ENST00000397728 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
LSS-202ENST00000397728 MT-ATP8P03928 68 aa10.66□□□□□ -0.7
LSS-202ENST00000397728 NBDYA0A0U1RRE5 68 aa10.65□□□□□ -0.7
LSS-202ENST00000397728 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
LSS-202ENST00000397728 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
LSS-202ENST00000397728 TSPEAR-AS2P59090 65 aa10.65□□□□□ -0.7
LSS-202ENST00000397728 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
LSS-202ENST00000397728 Q8N3U1 123 aa10.64□□□□□ -0.71
LSS-202ENST00000397728 ATP5EP2Q5VTU8 51 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms