RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 C1orf134Q5TEV5 83 aa13.96□□□□□ -0.18
CPNE1-204ENST00000397443 DNAH6Q9C0G6 4158 aa13.95□□□□□ -0.18
CPNE1-204ENST00000397443 DNAH2Q9P225 4427 aa13.95□□□□□ -0.18
CPNE1-204ENST00000397443 A0A0U1RRA0 63 aa13.94□□□□□ -0.18
CPNE1-204ENST00000397443 DLEU1O43261 78 aa13.94□□□□□ -0.18
CPNE1-204ENST00000397443 UNQ6190/PRO20217Q6UXQ8 127 aa13.94□□□□□ -0.18
CPNE1-204ENST00000397443 GVQW2A0A096LPI5 108 aaPredicted RBP13.93□□□□□ -0.18
CPNE1-204ENST00000397443 A0A0J9YXY3 114 aa13.93□□□□□ -0.18
CPNE1-204ENST00000397443 LCE6AA0A183 80 aa13.93□□□□□ -0.18
CPNE1-204ENST00000397443 HNRNPA3P51991 378 aaKnown RBP13.93□□□□□ -0.18
CPNE1-204ENST00000397443 C10orf25Q5T742 122 aa13.93□□□□□ -0.18
CPNE1-204ENST00000397443 C2orf91Q6ZV80 131 aa13.93□□□□□ -0.18
CPNE1-204ENST00000397443 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-204ENST00000397443 CAMK2N2Q96S95 79 aa13.92□□□□□ -0.18
CPNE1-204ENST00000397443 SACSQ9NZJ4 4579 aa13.92□□□□□ -0.18
CPNE1-204ENST00000397443 MEIG1Q5JSS6 88 aa13.92□□□□□ -0.18
CPNE1-204ENST00000397443 CXCL5P42830 114 aa13.9□□□□□ -0.18
CPNE1-204ENST00000397443 C9orf116Q5BN46 136 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-204ENST00000397443 DDTP30046 118 aa13.9□□□□□ -0.18
CPNE1-204ENST00000397443 LRCOL1A6NCL2 159 aa13.88□□□□□ -0.19
CPNE1-204ENST00000397443 PFN2P35080 140 aa13.88□□□□□ -0.19
CPNE1-204ENST00000397443 HERV-K104P63124 156 aa13.88□□□□□ -0.19
CPNE1-204ENST00000397443 Q6ZRU5 148 aa13.88□□□□□ -0.19
CPNE1-204ENST00000397443 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-204ENST00000397443 DAND5Q8N907 189 aa13.88□□□□□ -0.19
CPNE1-204ENST00000397443 SMIM13P0DJ93 91 aa13.87□□□□□ -0.19
CPNE1-204ENST00000397443 SLPIP03973 132 aa13.86□□□□□ -0.19
CPNE1-204ENST00000397443 C2orf48Q96LS8 159 aa13.86□□□□□ -0.19
CPNE1-204ENST00000397443 CTAG1AP78358 180 aa13.86□□□□□ -0.19
CPNE1-204ENST00000397443 ADAMTSL4-AS1Q5T5F5 129 aa13.86□□□□□ -0.19
CPNE1-204ENST00000397443 C6orf48Q9UBA6 75 aa13.86□□□□□ -0.19
CPNE1-204ENST00000397443 SYCNQ0VAF6 134 aa13.85□□□□□ -0.19
CPNE1-204ENST00000397443 SFTA2Q6UW10 78 aa13.85□□□□□ -0.19
CPNE1-204ENST00000397443 ERG28Q9UKR5 140 aa13.85□□□□□ -0.19
CPNE1-204ENST00000397443 KMT2CQ8NEZ4 4911 aaKnown RBP13.84□□□□□ -0.19
CPNE1-204ENST00000397443 LINC00158P58513 81 aa13.84□□□□□ -0.19
CPNE1-204ENST00000397443 NPC2P61916 151 aa13.84□□□□□ -0.19
CPNE1-204ENST00000397443 A0A087WTM6 91 aa13.83□□□□□ -0.2
CPNE1-204ENST00000397443 SRSF9Q13242 221 aaKnown RBP eCLIP13.83□□□□□ -0.2
CPNE1-204ENST00000397443 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.2
CPNE1-204ENST00000397443 CARD19Q96LW7 228 aa13.83□□□□□ -0.2
CPNE1-204ENST00000397443 HIST1H4GQ99525 98 aa13.83□□□□□ -0.2
CPNE1-204ENST00000397443 LITAFQ99732 161 aa13.83□□□□□ -0.2
CPNE1-204ENST00000397443 HIGD1BQ9P298 99 aa13.83□□□□□ -0.2
CPNE1-204ENST00000397443 RTL8CO15255 209 aa13.82□□□□□ -0.2
CPNE1-204ENST00000397443 C14orf177Q52M58 125 aa13.82□□□□□ -0.2
CPNE1-204ENST00000397443 TMEM238C9JI98 176 aa13.82□□□□□ -0.2
CPNE1-204ENST00000397443 TNP2Q05952 138 aa13.81□□□□□ -0.2
CPNE1-204ENST00000397443 FRAS1Q86XX4 4008 aa13.81□□□□□ -0.2
CPNE1-204ENST00000397443 TRBV30A0A0K0K1B3 111 aa13.8□□□□□ -0.2
CPNE1-204ENST00000397443 FUSP35637 526 aaKnown RBP eCLIP13.8□□□□□ -0.21e-10■■□□□ 12.2
CPNE1-204ENST00000397443 MIR7-3HGQ8N6C7 128 aa13.8□□□□□ -0.2
CPNE1-204ENST00000397443 Q8N814 137 aa13.8□□□□□ -0.2
CPNE1-204ENST00000397443 TIMM17BO60830 172 aa13.78□□□□□ -0.2
CPNE1-204ENST00000397443 LINC00587B1AMM8 73 aa13.77□□□□□ -0.21
CPNE1-204ENST00000397443 F8WDY8 70 aa13.77□□□□□ -0.21
CPNE1-204ENST00000397443 DNAH17Q9UFH2 4485 aa13.77□□□□□ -0.21
CPNE1-204ENST00000397443 GCSHP23434 173 aa13.76□□□□□ -0.21
CPNE1-204ENST00000397443 HINT1P49773 126 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-204ENST00000397443 SPANXB1Q9NS25 103 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-204ENST00000397443 HSD52Q0P140 79 aa13.76□□□□□ -0.21
CPNE1-204ENST00000397443 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-204ENST00000397443 EIF4EBP3O60516 100 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-204ENST00000397443 COX17Q14061 63 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 LINC01620Q4KN68 170 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 MUSTN1Q8IVN3 82 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 SPANXDQ9BXN6 97 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 SPANXCQ9NY87 97 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 RYR2Q92736 4967 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 CNBPP62633 177 aaKnown RBP13.74□□□□□ -0.21
CPNE1-204ENST00000397443 BATFQ16520 125 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 GAGE2EQ4V326 116 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 GAGE2DQ9UEU5 116 aa13.74□□□□□ -0.21
CPNE1-204ENST00000397443 RPL18AQ02543 176 aaKnown RBP13.73□□□□□ -0.21
CPNE1-204ENST00000397443 LINC00308Q8TCZ7 52 aa13.72□□□□□ -0.21
CPNE1-204ENST00000397443 CEND1Q8N111 149 aa13.72□□□□□ -0.21
CPNE1-204ENST00000397443 XAGE1AQ9HD64 81 aa13.72□□□□□ -0.21
CPNE1-204ENST00000397443 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
CPNE1-204ENST00000397443 EREGO14944 169 aa13.71□□□□□ -0.21
CPNE1-204ENST00000397443 SOSTDC1Q6X4U4 206 aa13.71□□□□□ -0.21
CPNE1-204ENST00000397443 Q6ZRP5 223 aa13.71□□□□□ -0.21
CPNE1-204ENST00000397443 FXYD2P54710 66 aa13.7□□□□□ -0.22
CPNE1-204ENST00000397443 SND1-IT1Q9HBX3 110 aa13.7□□□□□ -0.22
CPNE1-204ENST00000397443 HECTD4Q9Y4D8 3996 aa13.7□□□□□ -0.22
CPNE1-204ENST00000397443 TAL2Q16559 108 aa13.7□□□□□ -0.22
CPNE1-204ENST00000397443 PTTG1IPP53801 180 aa13.69□□□□□ -0.22
CPNE1-204ENST00000397443 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
CPNE1-204ENST00000397443 Q6ZVH6 145 aa13.69□□□□□ -0.22
CPNE1-204ENST00000397443 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
CPNE1-204ENST00000397443 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
CPNE1-204ENST00000397443 FAT2Q9NYQ8 4349 aa13.67□□□□□ -0.22
CPNE1-204ENST00000397443 IFITM1P13164 125 aa13.66□□□□□ -0.22
CPNE1-204ENST00000397443 IGLV5-52A0A0A0MRZ9 124 aa13.65□□□□□ -0.22
CPNE1-204ENST00000397443 LOC107984640A0A0U1RRK4 108 aa13.65□□□□□ -0.22
CPNE1-204ENST00000397443 A4D1N5 150 aa13.65□□□□□ -0.22
CPNE1-204ENST00000397443 M0R143 59 aa13.65□□□□□ -0.22
CPNE1-204ENST00000397443 C9orf163Q8N9P6 203 aa13.65□□□□□ -0.22
CPNE1-204ENST00000397443 RPL24P83731 157 aaKnown RBP13.64□□□□□ -0.23
CPNE1-204ENST00000397443 IGKV2-24A0A0C4DH68 120 aa13.64□□□□□ -0.23
CPNE1-204ENST00000397443 SNHG12Q9BXW3 62 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms