RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PCNX3Q9H6A9 2034 aa12.39□□□□□ -0.43
MCF2L-208ENST00000397030 CUL9Q8IWT3 2517 aa12.39□□□□□ -0.43
MCF2L-208ENST00000397030 Q6ZSN1 163 aa12.39□□□□□ -0.43
MCF2L-208ENST00000397030 A8MTW9 85 aa12.38□□□□□ -0.43
MCF2L-208ENST00000397030 CHTF8P0CG12 524 aa12.38□□□□□ -0.43
MCF2L-208ENST00000397030 Q6JHZ5 121 aa12.38□□□□□ -0.43
MCF2L-208ENST00000397030 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
MCF2L-208ENST00000397030 SMIM1B2RUZ4 78 aa12.36□□□□□ -0.43
MCF2L-208ENST00000397030 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
MCF2L-208ENST00000397030 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
MCF2L-208ENST00000397030 C22orf24Q9Y442 160 aa12.35□□□□□ -0.43
MCF2L-208ENST00000397030 MOBPQ13875 183 aa12.35□□□□□ -0.43
MCF2L-208ENST00000397030 CSPG4Q6UVK1 2322 aa12.35□□□□□ -0.43
MCF2L-208ENST00000397030 LINC00575Q6W349 94 aa12.34□□□□□ -0.43
MCF2L-208ENST00000397030 H0Y9P7 68 aa12.34□□□□□ -0.43
MCF2L-208ENST00000397030 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.43
MCF2L-208ENST00000397030 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
MCF2L-208ENST00000397030 NDUFC1O43677 76 aa12.32□□□□□ -0.44
MCF2L-208ENST00000397030 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
MCF2L-208ENST00000397030 RTL8CO15255 209 aa12.31□□□□□ -0.44
MCF2L-208ENST00000397030 ATP5EP56381 51 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-208ENST00000397030 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
MCF2L-208ENST00000397030 SOSTDC1Q6X4U4 206 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 ATG2AQ2TAZ0 1938 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 CRYGAP11844 174 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 COX6B2Q6YFQ2 88 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 ZNF580Q9UK33 172 aa12.28□□□□□ -0.44
MCF2L-208ENST00000397030 IGIPA6NJ69 53 aa12.27□□□□□ -0.44
MCF2L-208ENST00000397030 hDV103S1A0JD37 113 aa12.27□□□□□ -0.45
MCF2L-208ENST00000397030 PHF5AQ7RTV0 110 aaKnown RBP12.25□□□□□ -0.45
MCF2L-208ENST00000397030 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
MCF2L-208ENST00000397030 LINC00315P59091 139 aa12.25□□□□□ -0.45
MCF2L-208ENST00000397030 Q9UF83 564 aa12.24□□□□□ -0.45
MCF2L-208ENST00000397030 A0A087WVE0 104 aa12.24□□□□□ -0.45
MCF2L-208ENST00000397030 F8WDY8 70 aa12.23□□□□□ -0.45
MCF2L-208ENST00000397030 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
MCF2L-208ENST00000397030 ADAMTS20P59510 1910 aa12.21□□□□□ -0.45
MCF2L-208ENST00000397030 Q8N2B8 174 aa12.21□□□□□ -0.45
MCF2L-208ENST00000397030 ADAMTSL4-AS1Q5T5F5 129 aa12.21□□□□□ -0.45
MCF2L-208ENST00000397030 TSPEAR-AS2P59090 65 aa12.21□□□□□ -0.45
MCF2L-208ENST00000397030 PSPHP1O15172 72 aa12.19□□□□□ -0.46
MCF2L-208ENST00000397030 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
MCF2L-208ENST00000397030 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
MCF2L-208ENST00000397030 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
MCF2L-208ENST00000397030 ACACBO00763 2458 aa12.17□□□□□ -0.46
MCF2L-208ENST00000397030 TRBV7-7A0A0K0K1E9 115 aa12.17□□□□□ -0.46
MCF2L-208ENST00000397030 C2orf91Q6ZV80 131 aa12.17□□□□□ -0.46
MCF2L-208ENST00000397030 TET2Q6N021 2002 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-208ENST00000397030 KIAA0087Q14695 138 aa12.17□□□□□ -0.46
MCF2L-208ENST00000397030 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
MCF2L-208ENST00000397030 HCFC1P51610 2035 aa12.16□□□□□ -0.46
MCF2L-208ENST00000397030 Q96NJ1 140 aa12.15□□□□□ -0.46
MCF2L-208ENST00000397030 COX7CP15954 63 aa12.15□□□□□ -0.46
MCF2L-208ENST00000397030 LINC00167Q96N53 147 aa12.15□□□□□ -0.46
MCF2L-208ENST00000397030 ATP11AUNQ6ZP68 121 aa12.14□□□□□ -0.47
MCF2L-208ENST00000397030 Q8N3U1 123 aa12.14□□□□□ -0.47
MCF2L-208ENST00000397030 TRAV7A0A075B6U4 112 aa12.13□□□□□ -0.47
MCF2L-208ENST00000397030 ANKHD1Q8IWZ3 2542 aaKnown RBP12.13□□□□□ -0.47
MCF2L-208ENST00000397030 Q6ZRP5 223 aa12.13□□□□□ -0.47
MCF2L-208ENST00000397030 C1orf64Q8NEQ6 169 aa12.13□□□□□ -0.47
MCF2L-208ENST00000397030 LRP4O75096 1905 aa12.12□□□□□ -0.47
MCF2L-208ENST00000397030 ATRXP46100 2492 aa12.1□□□□□ -0.47
MCF2L-208ENST00000397030 CSDC2Q9Y534 153 aaKnown RBP12.1□□□□□ -0.47
MCF2L-208ENST00000397030 AMELXQ99217 191 aa12.1□□□□□ -0.47
MCF2L-208ENST00000397030 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-208ENST00000397030 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
MCF2L-208ENST00000397030 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
MCF2L-208ENST00000397030 LINC00313P59037 77 aa12.09□□□□□ -0.47
MCF2L-208ENST00000397030 AGRNO00468 2067 aa12.09□□□□□ -0.47
MCF2L-208ENST00000397030 PMAIP1Q13794 54 aa12.08□□□□□ -0.47
MCF2L-208ENST00000397030 IMUPQ9GZP8 106 aa12.08□□□□□ -0.48
MCF2L-208ENST00000397030 IGLV8-61A0A075B6I0 122 aa12.08□□□□□ -0.48
MCF2L-208ENST00000397030 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
MCF2L-208ENST00000397030 KIF25-AS1Q9Y6Z4 181 aa12.06□□□□□ -0.48
MCF2L-208ENST00000397030 SMIM29Q86T20 159 aa12.06□□□□□ -0.48
MCF2L-208ENST00000397030 PTPRSQ13332 1948 aa12.06□□□□□ -0.48
MCF2L-208ENST00000397030 SMR3BP02814 79 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-208ENST00000397030 LINC00588Q9Y4M8 146 aa12.05□□□□□ -0.48
MCF2L-208ENST00000397030 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
MCF2L-208ENST00000397030 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
MCF2L-208ENST00000397030 TTC28Q96AY4 2481 aa12.04□□□□□ -0.48
MCF2L-208ENST00000397030 A0A1B0GU69 56 aa12.04□□□□□ -0.48
MCF2L-208ENST00000397030 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
MCF2L-208ENST00000397030 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
MCF2L-208ENST00000397030 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
MCF2L-208ENST00000397030 MUC4Q99102 2169 aa12.02□□□□□ -0.48
MCF2L-208ENST00000397030 Q8NBF4 154 aa12.01□□□□□ -0.49
MCF2L-208ENST00000397030 C9orf92A6NGG3 77 aa12.01□□□□□ -0.49
MCF2L-208ENST00000397030 C11orf72Q8NBR9 251 aa12□□□□□ -0.49
MCF2L-208ENST00000397030 CPAMD8Q8IZJ3 1885 aa12□□□□□ -0.49
MCF2L-208ENST00000397030 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
MCF2L-208ENST00000397030 EML5Q05BV3 1969 aa11.99□□□□□ -0.49
MCF2L-208ENST00000397030 CDIP1Q9H305 208 aa11.99□□□□□ -0.49
MCF2L-208ENST00000397030 NAV2Q8IVL1 2488 aa11.98□□□□□ -0.49
MCF2L-208ENST00000397030 SMIM26A0A096LP01 95 aa11.98□□□□□ -0.49
MCF2L-208ENST00000397030 NAV3Q8IVL0 2385 aa11.97□□□□□ -0.49
MCF2L-208ENST00000397030 ST20-AS1Q8NBB2 130 aa11.97□□□□□ -0.49
MCF2L-208ENST00000397030 CCDC168Q8NDH2 2452 aa11.96□□□□□ -0.49
MCF2L-208ENST00000397030 ACYP2P14621 99 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms