RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SMIM26A0A096LP01 95 aa10.95□□□□□ -0.66
GNE-202ENST00000396594 IGHV3OR16-9A0A0B4J2B5 98 aa10.95□□□□□ -0.66
GNE-202ENST00000396594 SPINK6Q6UWN8 80 aa10.95□□□□□ -0.66
GNE-202ENST00000396594 CUL9Q8IWT3 2517 aa10.94□□□□□ -0.66
GNE-202ENST00000396594 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
GNE-202ENST00000396594 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
GNE-202ENST00000396594 hDV103S1A0JD37 113 aa10.93□□□□□ -0.66
GNE-202ENST00000396594 LINC00315P59091 139 aa10.93□□□□□ -0.66
GNE-202ENST00000396594 Q6ZSN1 163 aa10.92□□□□□ -0.66
GNE-202ENST00000396594 A8MTW9 85 aa10.92□□□□□ -0.66
GNE-202ENST00000396594 H3BPC8 53 aa10.91□□□□□ -0.66
GNE-202ENST00000396594 PRM2P04554 102 aa10.91□□□□□ -0.66
GNE-202ENST00000396594 Q6ZRU5 148 aa10.91□□□□□ -0.66
GNE-202ENST00000396594 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
GNE-202ENST00000396594 ESRGQ1W209 222 aa10.89□□□□□ -0.67
GNE-202ENST00000396594 A0A087WYN8 130 aa10.89□□□□□ -0.67
GNE-202ENST00000396594 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
GNE-202ENST00000396594 BRK1Q8WUW1 75 aa10.88□□□□□ -0.67
GNE-202ENST00000396594 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
GNE-202ENST00000396594 X6R8D5 127 aa10.88□□□□□ -0.67
GNE-202ENST00000396594 Q6ZVQ6 151 aa10.87□□□□□ -0.67
GNE-202ENST00000396594 XGP55808 180 aa10.87□□□□□ -0.67
GNE-202ENST00000396594 C9orf116Q5BN46 136 aaPredicted RBP10.86□□□□□ -0.67
GNE-202ENST00000396594 HCG22E2RYF7 251 aa10.86□□□□□ -0.67
GNE-202ENST00000396594 CIRBP-AS1Q8TBR5 109 aa10.86□□□□□ -0.67
GNE-202ENST00000396594 TRBV7-7A0A0K0K1E9 115 aa10.85□□□□□ -0.67
GNE-202ENST00000396594 FAM30AQ9NZY2 134 aa10.85□□□□□ -0.67
GNE-202ENST00000396594 MDFIQ99750 246 aa10.84□□□□□ -0.67
GNE-202ENST00000396594 SMCR5Q8TEV8 140 aa10.84□□□□□ -0.67
GNE-202ENST00000396594 HRCT1Q6UXD1 115 aa10.83□□□□□ -0.68
GNE-202ENST00000396594 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
GNE-202ENST00000396594 ELOF1P60002 83 aaKnown RBP10.82□□□□□ -0.68
GNE-202ENST00000396594 CELA1Q9UNI1 258 aa10.81□□□□□ -0.68
GNE-202ENST00000396594 PIEZO1Q92508 2521 aa10.81□□□□□ -0.68
GNE-202ENST00000396594 LOC110117498A0A087WWA1 95 aa10.81□□□□□ -0.68
GNE-202ENST00000396594 C16orf90A8MZG2 172 aa10.81□□□□□ -0.68
GNE-202ENST00000396594 TET2Q6N021 2002 aaPredicted RBP10.81□□□□□ -0.68
GNE-202ENST00000396594 DNAH10OSP0CZ25 163 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 LINC00337Q8N6G1 96 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 Q8NAQ8 132 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 ATRXP46100 2492 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 PRR14LQ5THK1 2151 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 Q8NBF4 154 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 A0A087WSZ3 146 aa10.8□□□□□ -0.68
GNE-202ENST00000396594 Q8N3U1 123 aa10.79□□□□□ -0.68
GNE-202ENST00000396594 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
GNE-202ENST00000396594 NBDYA0A0U1RRE5 68 aa10.79□□□□□ -0.68
GNE-202ENST00000396594 IGHV6-1A0A0B4J1U7 121 aa10.79□□□□□ -0.68
GNE-202ENST00000396594 Q6ZRP5 223 aa10.78□□□□□ -0.68
GNE-202ENST00000396594 A6NED7 52 aa10.78□□□□□ -0.68
GNE-202ENST00000396594 KRTAP24-1Q3LI83 254 aa10.78□□□□□ -0.68
GNE-202ENST00000396594 SBSPONQ8IVN8 264 aa10.77□□□□□ -0.68
GNE-202ENST00000396594 H0Y9P7 68 aa10.77□□□□□ -0.69
GNE-202ENST00000396594 WWC2-AS2Q96NR7 200 aa10.77□□□□□ -0.69
GNE-202ENST00000396594 SNURFQ9Y675 71 aa10.77□□□□□ -0.69
GNE-202ENST00000396594 MPLKIPQ8TAP9 179 aa10.77□□□□□ -0.69
GNE-202ENST00000396594 SPG11Q96JI7 2443 aa10.77□□□□□ -0.69
GNE-202ENST00000396594 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
GNE-202ENST00000396594 LINC01547P58512 204 aaPredicted RBP10.76□□□□□ -0.69
GNE-202ENST00000396594 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
GNE-202ENST00000396594 SPATA3Q8NHX4 192 aa10.74□□□□□ -0.69
GNE-202ENST00000396594 Q6ZRX8 168 aa10.74□□□□□ -0.69
GNE-202ENST00000396594 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
GNE-202ENST00000396594 PRRC2AP48634 2157 aaKnown RBP10.74□□□□□ -0.69
GNE-202ENST00000396594 C8orf87E5RJ46 101 aa10.73□□□□□ -0.69
GNE-202ENST00000396594 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
GNE-202ENST00000396594 CACNA1AO00555 2505 aa10.72□□□□□ -0.69
GNE-202ENST00000396594 CSPG4Q6UVK1 2322 aa10.72□□□□□ -0.69
GNE-202ENST00000396594 PTPRBP23467 1997 aa10.72□□□□□ -0.69
GNE-202ENST00000396594 TMEM254Q8TBM7 123 aa10.72□□□□□ -0.69
GNE-202ENST00000396594 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
GNE-202ENST00000396594 PRR3P79522 188 aaKnown RBP10.71□□□□□ -0.69
GNE-202ENST00000396594 PCSK5Q92824 1860 aa10.71□□□□□ -0.69
GNE-202ENST00000396594 BDP1A6H8Y1 2624 aa10.71□□□□□ -0.69
GNE-202ENST00000396594 PLXNB1O43157 2135 aa10.71□□□□□ -0.69
GNE-202ENST00000396594 CRYGAP11844 174 aa10.71□□□□□ -0.7
GNE-202ENST00000396594 SVIPQ8NHG7 77 aa10.71□□□□□ -0.7
GNE-202ENST00000396594 CCDC179H3BU77 68 aa10.68□□□□□ -0.7
GNE-202ENST00000396594 KIAA0087Q14695 138 aa10.68□□□□□ -0.7
GNE-202ENST00000396594 C19orf73Q9NVV2 129 aa10.68□□□□□ -0.7
GNE-202ENST00000396594 RTL8CO15255 209 aa10.68□□□□□ -0.7
GNE-202ENST00000396594 PLA2G1BP04054 148 aaKnown RBP10.68□□□□□ -0.7
GNE-202ENST00000396594 LINC00612Q8N6U2 182 aa10.67□□□□□ -0.7
GNE-202ENST00000396594 MOBPQ13875 183 aa10.67□□□□□ -0.7
GNE-202ENST00000396594 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
GNE-202ENST00000396594 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
GNE-202ENST00000396594 TRBV7-4A0A0J9YYF1 115 aa10.66□□□□□ -0.7
GNE-202ENST00000396594 A0A096LNT2 108 aa10.66□□□□□ -0.7
GNE-202ENST00000396594 PRLHP81277 87 aa10.66□□□□□ -0.7
GNE-202ENST00000396594 LINC00588Q9Y4M8 146 aa10.65□□□□□ -0.7
GNE-202ENST00000396594 DSCAML1Q8TD84 2053 aa10.64□□□□□ -0.71
GNE-202ENST00000396594 WNK1Q9H4A3 2382 aa10.64□□□□□ -0.71
GNE-202ENST00000396594 CSNK1G2-AS1Q8NCQ2 148 aa10.63□□□□□ -0.71
GNE-202ENST00000396594 ACYP2P14621 99 aa10.63□□□□□ -0.71
GNE-202ENST00000396594 ARHGAP32A7KAX9 2087 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 IGLV6-57P01721 117 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
GNE-202ENST00000396594 Q6ZQT0 140 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms