RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
TCOF1-203ENST00000394269 SPANXDQ9BXN6 97 aa7.69□□□□□ -1.18
TCOF1-203ENST00000394269 SPANXCQ9NY87 97 aa7.69□□□□□ -1.18
TCOF1-203ENST00000394269 A0A0B4J2C4 111 aa7.68□□□□□ -1.18
TCOF1-203ENST00000394269 REG3AQ06141 175 aa7.68□□□□□ -1.18
TCOF1-203ENST00000394269 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
TCOF1-203ENST00000394269 ICOSQ9Y6W8 199 aa7.68□□□□□ -1.18
TCOF1-203ENST00000394269 A0A0J9YWU9 116 aa7.67□□□□□ -1.18
TCOF1-203ENST00000394269 NANOS2P60321 138 aaKnown RBP7.67□□□□□ -1.18
TCOF1-203ENST00000394269 CHCHD10Q8WYQ3 142 aaPredicted RBP7.67□□□□□ -1.18
TCOF1-203ENST00000394269 CKS1BP61024 79 aa7.67□□□□□ -1.18
TCOF1-203ENST00000394269 A0A087WZ39 114 aa7.66□□□□□ -1.18
TCOF1-203ENST00000394269 COX6CP09669 75 aa7.66□□□□□ -1.18
TCOF1-203ENST00000394269 UBE2WQ96B02 151 aa7.66□□□□□ -1.18
TCOF1-203ENST00000394269 IFITM1P13164 125 aa7.66□□□□□ -1.18
TCOF1-203ENST00000394269 OR13C6PQ8NH95 151 aa7.66□□□□□ -1.18
TCOF1-203ENST00000394269 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
TCOF1-203ENST00000394269 TRBV20-1A0A075B6N2 111 aa7.65□□□□□ -1.18
TCOF1-203ENST00000394269 HERV-K104P63124 156 aa7.65□□□□□ -1.18
TCOF1-203ENST00000394269 KPRPQ5T749 579 aaPredicted RBP7.65□□□□□ -1.18
TCOF1-203ENST00000394269 FAM19A3Q7Z5A8 133 aa7.65□□□□□ -1.18
TCOF1-203ENST00000394269 C9orf116Q5BN46 136 aaPredicted RBP7.65□□□□□ -1.19
TCOF1-203ENST00000394269 COX7A2LO14548 114 aa7.64□□□□□ -1.19
TCOF1-203ENST00000394269 SND1-IT1Q9HBX3 110 aa7.64□□□□□ -1.19
TCOF1-203ENST00000394269 TIMM17BO60830 172 aa7.64□□□□□ -1.19
TCOF1-203ENST00000394269 WIPF1O43516 503 aa7.64□□□□□ -1.19
TCOF1-203ENST00000394269 SLC25A20O43772 301 aa7.64□□□□□ -1.19
TCOF1-203ENST00000394269 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
TCOF1-203ENST00000394269 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
TCOF1-203ENST00000394269 LYPD5Q6UWN5 251 aa7.63□□□□□ -1.19
TCOF1-203ENST00000394269 WFDC10BQ8IUB3 73 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 C11orf45Q8TAV5 145 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 J3QR89 54 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 LELP1Q5T871 98 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 CRPP02741 224 aa7.62□□□□□ -1.19
TCOF1-203ENST00000394269 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
TCOF1-203ENST00000394269 DEFB131BA0A096LNP1 70 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 CARD19Q96LW7 228 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 CCL18P55774 89 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 LINC01620Q4KN68 170 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 ANKRD29Q8N6D5 301 aa7.61□□□□□ -1.19
TCOF1-203ENST00000394269 SPATA25Q9BR10 227 aa7.6□□□□□ -1.19
TCOF1-203ENST00000394269 C1orf43Q9BWL3 253 aa7.6□□□□□ -1.19
TCOF1-203ENST00000394269 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
TCOF1-203ENST00000394269 NTN5Q8WTR8 489 aaPredicted RBP7.59□□□□□ -1.19
TCOF1-203ENST00000394269 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
TCOF1-203ENST00000394269 FOXI1Q12951 378 aa7.59□□□□□ -1.19
TCOF1-203ENST00000394269 DNHD1Q96M86 4753 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 UNQ6190/PRO20217Q6UXQ8 127 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 LINC00337Q8N6G1 96 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 Q9HAA7 133 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 IBA57-AS1B1ANH7 110 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 HIGD2BQ4VC39 106 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 ESRGQ1W209 222 aa7.58□□□□□ -1.2
TCOF1-203ENST00000394269 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 SPAG11BQ08648 103 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 ENHOQ6UWT2 76 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 TEN1Q86WV5 123 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 Q8IZM0 81 aa7.57□□□□□ -1.2
TCOF1-203ENST00000394269 A0A1B0GV72 72 aa7.56□□□□□ -1.2
TCOF1-203ENST00000394269 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
TCOF1-203ENST00000394269 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
TCOF1-203ENST00000394269 TRAV13-2A0A0B4J235 113 aa7.55□□□□□ -1.2
TCOF1-203ENST00000394269 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
TCOF1-203ENST00000394269 MT-ATP8P03928 68 aa7.55□□□□□ -1.2
TCOF1-203ENST00000394269 PPDPFLQ8WWR9 84 aa7.55□□□□□ -1.2
TCOF1-203ENST00000394269 KIAA0087Q14695 138 aa7.54□□□□□ -1.2
TCOF1-203ENST00000394269 XGP55808 180 aa7.54□□□□□ -1.2
TCOF1-203ENST00000394269 SMIM11BQ8TCY0 68 aa7.54□□□□□ -1.2
TCOF1-203ENST00000394269 TRBV10-2A0A0K0K1G8 114 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 LST1O00453 97 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 NCR3O14931 201 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 K7EIL1 84 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
TCOF1-203ENST00000394269 CMYA5Q8N3K9 4069 aa7.51□□□□□ -1.21
TCOF1-203ENST00000394269 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
TCOF1-203ENST00000394269 SLPIP03973 132 aa7.5□□□□□ -1.21
TCOF1-203ENST00000394269 DNAL4O96015 105 aa7.5□□□□□ -1.21
TCOF1-203ENST00000394269 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
TCOF1-203ENST00000394269 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
TCOF1-203ENST00000394269 CAMK2N2Q96S95 79 aa7.5□□□□□ -1.21
TCOF1-203ENST00000394269 BAALC-AS2P0C853 105 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 A0A087WYN8 130 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 LECT2O14960 151 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 SS18L2Q9UHA2 77 aa7.49□□□□□ -1.21
TCOF1-203ENST00000394269 CXCL5P42830 114 aa7.48□□□□□ -1.21
TCOF1-203ENST00000394269 RPL18AQ02543 176 aaKnown RBP7.48□□□□□ -1.21
TCOF1-203ENST00000394269 KLK5Q9Y337 293 aaPredicted RBP7.48□□□□□ -1.21
TCOF1-203ENST00000394269 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
TCOF1-203ENST00000394269 RPL28P46779 137 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms