RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 A0A0U1RRA0 63 aa15.05■□□□□ 0
HMGA2-203ENST00000393578 C15orf53Q8NAA6 179 aa15.05■□□□□ -0
HMGA2-203ENST00000393578 HUWE1Q7Z6Z7 4374 aaKnown RBP15.05■□□□□ -0
HMGA2-203ENST00000393578 MALP21145 153 aa15.04■□□□□ -0
HMGA2-203ENST00000393578 CRPP02741 224 aa15.04■□□□□ -0
HMGA2-203ENST00000393578 TRAV8-4A0A0B4J246 113 aa15.03■□□□□ -0
HMGA2-203ENST00000393578 PPDPFQ9H3Y8 114 aa15.03■□□□□ -0
HMGA2-203ENST00000393578 IBA57-AS1B1ANH7 110 aa15.02■□□□□ -0
HMGA2-203ENST00000393578 GAGE12HA6NDE8 117 aa15.02□□□□□ -0.01
HMGA2-203ENST00000393578 UBE2WQ96B02 151 aa15.01□□□□□ -0.01
HMGA2-203ENST00000393578 ERG28Q9UKR5 140 aa15.01□□□□□ -0.01
HMGA2-203ENST00000393578 KIAA0087Q14695 138 aa15□□□□□ -0.01
HMGA2-203ENST00000393578 B9D2Q9BPU9 175 aa15□□□□□ -0.01
HMGA2-203ENST00000393578 LINC01556Q5JQF7 62 aa14.99□□□□□ -0.01
HMGA2-203ENST00000393578 SOSTDC1Q6X4U4 206 aa14.99□□□□□ -0.01
HMGA2-203ENST00000393578 CXCL5P42830 114 aa14.98□□□□□ -0.01
HMGA2-203ENST00000393578 CKS1BP61024 79 aa14.98□□□□□ -0.01
HMGA2-203ENST00000393578 LINC00158P58513 81 aa14.98□□□□□ -0.01
HMGA2-203ENST00000393578 LYRM7Q5U5X0 104 aa14.98□□□□□ -0.01
HMGA2-203ENST00000393578 CFAP161Q6P656 301 aa14.98□□□□□ -0.01
HMGA2-203ENST00000393578 KLK5Q9Y337 293 aaPredicted RBP14.98□□□□□ -0.01
HMGA2-203ENST00000393578 LOC107984156A0A0G2JMH3 177 aa14.97□□□□□ -0.01
HMGA2-203ENST00000393578 ARL17AQ8IVW1 177 aa14.97□□□□□ -0.01
HMGA2-203ENST00000393578 MIR7-3HGQ8N6C7 128 aa14.97□□□□□ -0.01
HMGA2-203ENST00000393578 C2orf82Q6UX34 121 aa14.96□□□□□ -0.01
HMGA2-203ENST00000393578 H7C2G1 150 aa14.94□□□□□ -0.02
HMGA2-203ENST00000393578 DNAH10OSP0CZ25 163 aa14.93□□□□□ -0.02
HMGA2-203ENST00000393578 PFN2P35080 140 aa14.93□□□□□ -0.02
HMGA2-203ENST00000393578 Q1RN00 199 aa14.93□□□□□ -0.02
HMGA2-203ENST00000393578 H3BMG7 143 aa14.92□□□□□ -0.02
HMGA2-203ENST00000393578 PSMB2P49721 201 aa14.92□□□□□ -0.02
HMGA2-203ENST00000393578 LINC00588Q9Y4M8 146 aa14.91□□□□□ -0.02
HMGA2-203ENST00000393578 CCL18P55774 89 aa14.91□□□□□ -0.02
HMGA2-203ENST00000393578 SPAG11BQ08648 103 aa14.91□□□□□ -0.02
HMGA2-203ENST00000393578 COL7A1Q02388 2944 aa14.91□□□□□ -0.02
HMGA2-203ENST00000393578 TRBV20-1A0A075B6N2 111 aa14.9□□□□□ -0.02
HMGA2-203ENST00000393578 SCGB1C2P0DMR2 95 aa14.9□□□□□ -0.02
HMGA2-203ENST00000393578 COX17Q14061 63 aa14.9□□□□□ -0.02
HMGA2-203ENST00000393578 KRTAP26-1Q6PEX3 210 aa14.9□□□□□ -0.02
HMGA2-203ENST00000393578 DNAH9Q9NYC9 4486 aa14.89□□□□□ -0.03
HMGA2-203ENST00000393578 TRBV30A0A0K0K1B3 111 aa14.89□□□□□ -0.03
HMGA2-203ENST00000393578 RPL13AP40429 203 aaKnown RBP14.89□□□□□ -0.03
HMGA2-203ENST00000393578 SND1-IT1Q9HBX3 110 aa14.87□□□□□ -0.03
HMGA2-203ENST00000393578 STAB2Q8WWQ8 2551 aa14.87□□□□□ -0.03
HMGA2-203ENST00000393578 C1orf43Q9BWL3 253 aa14.87□□□□□ -0.03
HMGA2-203ENST00000393578 F8W1H4 67 aa14.85□□□□□ -0.03
HMGA2-203ENST00000393578 TRIAP1O43715 76 aa14.85□□□□□ -0.03
HMGA2-203ENST00000393578 TCL1BO95988 128 aa14.85□□□□□ -0.03
HMGA2-203ENST00000393578 NHLRC4P0CG21 123 aaPredicted RBP14.85□□□□□ -0.03
HMGA2-203ENST00000393578 C6orf223Q8N319 242 aa14.85□□□□□ -0.03
HMGA2-203ENST00000393578 UPK3BQ9BT76 320 aa14.84□□□□□ -0.03
HMGA2-203ENST00000393578 UNQ6190/PRO20217Q6UXQ8 127 aa14.83□□□□□ -0.04
HMGA2-203ENST00000393578 TRAV13-2A0A0B4J235 113 aa14.82□□□□□ -0.04
HMGA2-203ENST00000393578 COX6CP09669 75 aa14.82□□□□□ -0.04
HMGA2-203ENST00000393578 NTN5Q8WTR8 489 aaPredicted RBP14.82□□□□□ -0.04
HMGA2-203ENST00000393578 LINC00526Q96FQ7 95 aa14.82□□□□□ -0.04
HMGA2-203ENST00000393578 C10orf25Q5T742 122 aa14.82□□□□□ -0.04
HMGA2-203ENST00000393578 IGKV2D-24A0A075B6R9 120 aa14.81□□□□□ -0.04
HMGA2-203ENST00000393578 C9orf116Q5BN46 136 aaPredicted RBP14.81□□□□□ -0.04
HMGA2-203ENST00000393578 IGKV2-28A0A075B6P5 120 aa14.8□□□□□ -0.04
HMGA2-203ENST00000393578 IGKV2D-28P01615 120 aa14.8□□□□□ -0.04
HMGA2-203ENST00000393578 MUC7Q8TAX7 377 aa14.8□□□□□ -0.04
HMGA2-203ENST00000393578 PRO0461Q9UI25 63 aa14.8□□□□□ -0.04
HMGA2-203ENST00000393578 GVQW2A0A096LPI5 108 aaPredicted RBP14.8□□□□□ -0.04
HMGA2-203ENST00000393578 ZNF561-AS1K7EIQ3 104 aa14.79□□□□□ -0.04
HMGA2-203ENST00000393578 LINC00337Q8N6G1 96 aa14.78□□□□□ -0.04
HMGA2-203ENST00000393578 DNHD1Q96M86 4753 aa14.77□□□□□ -0.04
HMGA2-203ENST00000393578 WFDC2Q14508 124 aa14.77□□□□□ -0.04
HMGA2-203ENST00000393578 C15orf56Q8N910 161 aa14.77□□□□□ -0.04
HMGA2-203ENST00000393578 Q9HAA7 133 aa14.77□□□□□ -0.04
HMGA2-203ENST00000393578 ATXN8Q156A1 80 aa14.76□□□□□ -0.05
HMGA2-203ENST00000393578 MTURNQ8N3F0 131 aa14.76□□□□□ -0.05
HMGA2-203ENST00000393578 HIGD2BQ4VC39 106 aa14.75□□□□□ -0.05
HMGA2-203ENST00000393578 NDUFC2O95298 119 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 C2orf48Q96LS8 159 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 CAMK2N2Q96S95 79 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 C6orf48Q9UBA6 75 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 APLNQ9ULZ1 77 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 OCIAD2Q56VL3 154 aa14.73□□□□□ -0.05
HMGA2-203ENST00000393578 F8WDY8 70 aa14.71□□□□□ -0.05
HMGA2-203ENST00000393578 KRTAP21-3Q3LHN1 58 aa14.71□□□□□ -0.05
HMGA2-203ENST00000393578 RMI2Q96E14 147 aa14.71□□□□□ -0.05
HMGA2-203ENST00000393578 RPL28P46779 137 aaKnown RBP14.7□□□□□ -0.06
HMGA2-203ENST00000393578 SMCPP49901 116 aaPredicted RBP14.7□□□□□ -0.06
HMGA2-203ENST00000393578 CLEC2BQ92478 149 aa14.69□□□□□ -0.06
HMGA2-203ENST00000393578 LINC01620Q4KN68 170 aa14.69□□□□□ -0.06
HMGA2-203ENST00000393578 LST1O00453 97 aa14.68□□□□□ -0.06
HMGA2-203ENST00000393578 NUPR2A6NF83 97 aa14.67□□□□□ -0.06
HMGA2-203ENST00000393578 C9JAW5 83 aa14.67□□□□□ -0.06
HMGA2-203ENST00000393578 ETDBQ3ZM63 59 aa14.67□□□□□ -0.06
HMGA2-203ENST00000393578 Q6ZRU5 148 aa14.67□□□□□ -0.06
HMGA2-203ENST00000393578 OR13C6PQ8NH95 151 aa14.67□□□□□ -0.06
HMGA2-203ENST00000393578 K7ERU9 68 aa14.66□□□□□ -0.06
HMGA2-203ENST00000393578 SMIM11BQ8TCY0 68 aa14.66□□□□□ -0.06
HMGA2-203ENST00000393578 MEGF8Q7Z7M0 2845 aa14.66□□□□□ -0.06
HMGA2-203ENST00000393578 SLC25A20O43772 301 aa14.65□□□□□ -0.06
HMGA2-203ENST00000393578 UBE2DNLQ8IWF7 75 aa14.65□□□□□ -0.06
HMGA2-203ENST00000393578 M0QXV9 152 aa14.64□□□□□ -0.07
HMGA2-203ENST00000393578 PRR3P79522 188 aaKnown RBP14.64□□□□□ -0.07
HMGA2-203ENST00000393578 DYNC2H1Q8NCM8 4307 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms