RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 HIGD2AQ9BW72 106 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 C16orf95Q9H693 158 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 CELA1Q9UNI1 258 aa5.49□□□□□ -1.53
VTI1A-201ENST00000393077 H3BQ85 93 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 AVPP01185 164 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 IGHV4-38-2P0DP08 117 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 Q6ZRU5 148 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 TRGV2A0A075B6R0 118 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 IGHV4-28A0A0C4DH34 117 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 CXCL6P80162 114 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 IBA57-AS1B1ANH7 110 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 PROK1P58294 105 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 LINC00315P59091 139 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
VTI1A-201ENST00000393077 FRYQ5TBA9 3013 aa5.48□□□□□ -1.53
VTI1A-201ENST00000393077 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
VTI1A-201ENST00000393077 A8MUN3 132 aa5.47□□□□□ -1.53
VTI1A-201ENST00000393077 LINC00242Q5T6M2 205 aa5.47□□□□□ -1.53
VTI1A-201ENST00000393077 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
VTI1A-201ENST00000393077 COX6A2Q02221 97 aa5.47□□□□□ -1.53
VTI1A-201ENST00000393077 F8W735 103 aaPredicted RBP5.46□□□□□ -1.53
VTI1A-201ENST00000393077 CCDC140Q96MF4 163 aa5.46□□□□□ -1.53
VTI1A-201ENST00000393077 NBEAQ8NFP9 2946 aa5.46□□□□□ -1.53
VTI1A-201ENST00000393077 DMXL1Q9Y485 3027 aa5.46□□□□□ -1.53
VTI1A-201ENST00000393077 A0A1W2PPR1 153 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 LMO4P61968 165 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 SERTAD4-AS1Q5TG53 156 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
VTI1A-201ENST00000393077 IGHV4-59P01825 116 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 USMG5Q96IX5 58 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 ANKRD17O75179 2603 aaKnown RBP5.46□□□□□ -1.54
VTI1A-201ENST00000393077 NDUFB1O75438 58 aa5.46□□□□□ -1.54
VTI1A-201ENST00000393077 TRGV4A0A0C4DH28 118 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 HCG22E2RYF7 251 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 J3QKU1 62 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 Q6ZQY7 126 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.45□□□□□ -1.54
VTI1A-201ENST00000393077 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 C11orf72Q8NBR9 251 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 TRBV6-4A0A1B0GX49 114 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 DEFB112Q30KQ8 113 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 Q8N9W7 124 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
VTI1A-201ENST00000393077 C11orf71Q6IPW1 123 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 LOC400499M0QZD8 3231 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 C6orf223Q8N319 242 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 ZNF843Q8N446 348 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 KLLNB2CW77 178 aa5.44□□□□□ -1.54
VTI1A-201ENST00000393077 DEFB131AP59861 70 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 C1orf158Q8N1D5 194 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 Q8N9L7 120 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 ZNF575Q86XF7 245 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 BBC3Q96PG8 261 aaPredicted RBP5.43□□□□□ -1.54
VTI1A-201ENST00000393077 CHCHD7Q9BUK0 85 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 ADGRG4Q8IZF6 3080 aa5.43□□□□□ -1.54
VTI1A-201ENST00000393077 ERC2-IT1O76042 136 aa5.42□□□□□ -1.54
VTI1A-201ENST00000393077 C11orf45Q8TAV5 145 aa5.42□□□□□ -1.54
VTI1A-201ENST00000393077 DEFB113Q30KQ7 82 aa5.42□□□□□ -1.54
VTI1A-201ENST00000393077 MDFIQ99750 246 aa5.42□□□□□ -1.54
VTI1A-201ENST00000393077 C3orf84H3BNL1 204 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 UBE2E2Q96LR5 201 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 K7EQD1 137 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 MUC4Q99102 2169 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 EPM2AB3EWF7 344 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 Q6ZQT0 140 aa5.41□□□□□ -1.54
VTI1A-201ENST00000393077 ATMQ13315 3056 aa5.4□□□□□ -1.54
VTI1A-201ENST00000393077 ODF3BA8MYP8 253 aa5.4□□□□□ -1.54
VTI1A-201ENST00000393077 M0R378 163 aa5.4□□□□□ -1.54
VTI1A-201ENST00000393077 C5orf56Q8N8D9 126 aa5.4□□□□□ -1.54
VTI1A-201ENST00000393077 IGKV2-28A0A075B6P5 120 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 TRBV6-8A0A0A6YYG3 113 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 IGKV2D-28P01615 120 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 CLPSL2Q6UWE3 100 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 LCA10Q71F78 164 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 DEFB105AQ8NG35 78 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 MUC7Q8TAX7 377 aa5.4□□□□□ -1.55
VTI1A-201ENST00000393077 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.55
VTI1A-201ENST00000393077 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 TRBV7-4A0A0J9YYF1 115 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 Q1T7F1 81 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 DEFB136Q30KP8 78 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 OBSCN-AS1Q96MR7 158 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 ZZEF1O43149 2961 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 IGLV5-45A0A087WSX0 123 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 hDV103S1A0JD37 113 aa5.39□□□□□ -1.55
VTI1A-201ENST00000393077 SYCNQ0VAF6 134 aa5.38□□□□□ -1.55
VTI1A-201ENST00000393077 CFAP46Q8IYW2 2715 aa5.38□□□□□ -1.55
VTI1A-201ENST00000393077 COX7BP24311 80 aa5.38□□□□□ -1.55
VTI1A-201ENST00000393077 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms