RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
CCDC50-201ENST00000392455 RPS28P62857 69 aaKnown RBP10.78□□□□□ -0.68
CCDC50-201ENST00000392455 LINC00482Q8N8I6 264 aa10.78□□□□□ -0.68
CCDC50-201ENST00000392455 IGLV5-52A0A0A0MRZ9 124 aa10.77□□□□□ -0.68
CCDC50-201ENST00000392455 LINC00575Q6W349 94 aa10.77□□□□□ -0.68
CCDC50-201ENST00000392455 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
CCDC50-201ENST00000392455 CYSRT1A8MQ03 144 aa10.77□□□□□ -0.69
CCDC50-201ENST00000392455 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
CCDC50-201ENST00000392455 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
CCDC50-201ENST00000392455 CDC42SE2Q9NRR3 84 aa10.76□□□□□ -0.69
CCDC50-201ENST00000392455 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
CCDC50-201ENST00000392455 SPINK1P00995 79 aa10.75□□□□□ -0.69
CCDC50-201ENST00000392455 PSMG3-AS1Q96PY0 264 aa10.75□□□□□ -0.69
CCDC50-201ENST00000392455 KLLNB2CW77 178 aa10.75□□□□□ -0.69
CCDC50-201ENST00000392455 C2orf91Q6ZV80 131 aa10.75□□□□□ -0.69
CCDC50-201ENST00000392455 RNASE3P12724 160 aaKnown RBP10.74□□□□□ -0.69
CCDC50-201ENST00000392455 LY6G6CO95867 125 aa10.74□□□□□ -0.69
CCDC50-201ENST00000392455 IGLV2-8P01709 118 aa10.74□□□□□ -0.69
CCDC50-201ENST00000392455 GDF5OSQ5U4N7 250 aa10.74□□□□□ -0.69
CCDC50-201ENST00000392455 BBC3Q96PG8 261 aaPredicted RBP10.74□□□□□ -0.69
CCDC50-201ENST00000392455 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
CCDC50-201ENST00000392455 PRLHP81277 87 aa10.73□□□□□ -0.69
CCDC50-201ENST00000392455 M0R2N4 97 aa10.73□□□□□ -0.69
CCDC50-201ENST00000392455 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
CCDC50-201ENST00000392455 PRM2P04554 102 aa10.72□□□□□ -0.69
CCDC50-201ENST00000392455 PROK1P58294 105 aa10.72□□□□□ -0.69
CCDC50-201ENST00000392455 POLR2KP53803 58 aaKnown RBP10.72□□□□□ -0.69
CCDC50-201ENST00000392455 C11orf1Q9H5F2 150 aa10.72□□□□□ -0.69
CCDC50-201ENST00000392455 C6orf48Q9UBA6 75 aa10.71□□□□□ -0.69
CCDC50-201ENST00000392455 PKD1L2Q7Z442 2459 aa10.71□□□□□ -0.7
CCDC50-201ENST00000392455 PCOTHQ58A44 107 aa10.71□□□□□ -0.7
CCDC50-201ENST00000392455 LY6G6DO95868 133 aa10.7□□□□□ -0.7
CCDC50-201ENST00000392455 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
CCDC50-201ENST00000392455 ATP11AUNQ6ZP68 121 aa10.69□□□□□ -0.7
CCDC50-201ENST00000392455 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
CCDC50-201ENST00000392455 Q6ZSV7 163 aa10.69□□□□□ -0.7
CCDC50-201ENST00000392455 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
CCDC50-201ENST00000392455 SBSPONQ8IVN8 264 aa10.68□□□□□ -0.7
CCDC50-201ENST00000392455 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
CCDC50-201ENST00000392455 ANKRD17O75179 2603 aaKnown RBP10.67□□□□□ -0.7
CCDC50-201ENST00000392455 TRAV22A0A0B4J277 110 aa10.67□□□□□ -0.7
CCDC50-201ENST00000392455 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
CCDC50-201ENST00000392455 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
CCDC50-201ENST00000392455 CRIPTQ9P021 101 aa10.66□□□□□ -0.7
CCDC50-201ENST00000392455 SETD2Q9BYW2 2564 aaPredicted RBP10.66□□□□□ -0.7
CCDC50-201ENST00000392455 A0A087WSZ3 146 aa10.65□□□□□ -0.7
CCDC50-201ENST00000392455 MTORP42345 2549 aa10.65□□□□□ -0.7
CCDC50-201ENST00000392455 CRIP1P50238 77 aa10.65□□□□□ -0.7
CCDC50-201ENST00000392455 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.71
CCDC50-201ENST00000392455 CYP4F30PQ9H0H9 118 aa10.64□□□□□ -0.71
CCDC50-201ENST00000392455 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
CCDC50-201ENST00000392455 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
CCDC50-201ENST00000392455 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
CCDC50-201ENST00000392455 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
CCDC50-201ENST00000392455 POLQO75417 2590 aa10.62□□□□□ -0.71
CCDC50-201ENST00000392455 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
CCDC50-201ENST00000392455 Q6ZPA2 131 aa10.62□□□□□ -0.71
CCDC50-201ENST00000392455 C11orf71Q6IPW1 123 aa10.62□□□□□ -0.71
CCDC50-201ENST00000392455 EDN2P20800 178 aa10.61□□□□□ -0.71
CCDC50-201ENST00000392455 SMIM1B2RUZ4 78 aa10.61□□□□□ -0.71
CCDC50-201ENST00000392455 C6orf223Q8N319 242 aa10.61□□□□□ -0.71
CCDC50-201ENST00000392455 NHLRC4P0CG21 123 aaPredicted RBP10.61□□□□□ -0.71
CCDC50-201ENST00000392455 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
CCDC50-201ENST00000392455 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
CCDC50-201ENST00000392455 PIEZO2Q9H5I5 2752 aa10.59□□□□□ -0.71
CCDC50-201ENST00000392455 A0A087WYN8 130 aa10.59□□□□□ -0.71
CCDC50-201ENST00000392455 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.72
CCDC50-201ENST00000392455 Q6ZS46 218 aa10.58□□□□□ -0.72
CCDC50-201ENST00000392455 ZNF295-AS1Q8N0V1 137 aa10.58□□□□□ -0.72
CCDC50-201ENST00000392455 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
CCDC50-201ENST00000392455 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
CCDC50-201ENST00000392455 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
CCDC50-201ENST00000392455 AMELXQ99217 191 aa10.55□□□□□ -0.72
CCDC50-201ENST00000392455 LOC101927531A0A1B0GV80 90 aa10.55□□□□□ -0.72
CCDC50-201ENST00000392455 LUZP6Q538Z0 58 aa10.55□□□□□ -0.72
CCDC50-201ENST00000392455 UQCR11O14957 56 aa10.54□□□□□ -0.72
CCDC50-201ENST00000392455 LINC00313P59037 77 aa10.54□□□□□ -0.72
CCDC50-201ENST00000392455 PRR9Q5T870 116 aa10.53□□□□□ -0.72
CCDC50-201ENST00000392455 IGLV1-40P01703 118 aa10.53□□□□□ -0.72
CCDC50-201ENST00000392455 CRIP3Q6Q6R5 217 aa10.53□□□□□ -0.72
CCDC50-201ENST00000392455 SSBP3-AS1Q7Z2R9 100 aa10.52□□□□□ -0.72
CCDC50-201ENST00000392455 MOBPQ13875 183 aa10.52□□□□□ -0.73
CCDC50-201ENST00000392455 MUC22E2RYF6 1773 aaPredicted RBP10.52□□□□□ -0.73
CCDC50-201ENST00000392455 A0A087WVE0 104 aa10.52□□□□□ -0.73
CCDC50-201ENST00000392455 ZNF580Q9UK33 172 aa10.51□□□□□ -0.73
CCDC50-201ENST00000392455 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
CCDC50-201ENST00000392455 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
CCDC50-201ENST00000392455 PCSK5Q92824 1860 aa10.5□□□□□ -0.73
CCDC50-201ENST00000392455 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
CCDC50-201ENST00000392455 BRI3O95415 125 aa10.49□□□□□ -0.73
CCDC50-201ENST00000392455 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
CCDC50-201ENST00000392455 FAM229AH3BQW9 127 aa10.47□□□□□ -0.73
CCDC50-201ENST00000392455 SMR3AQ99954 134 aa10.47□□□□□ -0.73
CCDC50-201ENST00000392455 SMIM29Q86T20 159 aa10.46□□□□□ -0.73
CCDC50-201ENST00000392455 C11orf21Q9P2W6 132 aa10.46□□□□□ -0.74
CCDC50-201ENST00000392455 COX6A2Q02221 97 aa10.46□□□□□ -0.74
CCDC50-201ENST00000392455 ELOF1P60002 83 aaKnown RBP10.46□□□□□ -0.74
CCDC50-201ENST00000392455 LOC110117498A0A087WWA1 95 aa10.45□□□□□ -0.74
CCDC50-201ENST00000392455 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
CCDC50-201ENST00000392455 SPTBN4Q9H254 2564 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms