RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 F8WDY8 70 aa12.15□□□□□ -0.46
SMN2-202ENST00000380742 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
SMN2-202ENST00000380742 DNAH8Q96JB1 4490 aa12.14□□□□□ -0.47
SMN2-202ENST00000380742 NDUFA1O15239 70 aa12.14□□□□□ -0.47
SMN2-202ENST00000380742 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
SMN2-202ENST00000380742 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
SMN2-202ENST00000380742 GCSHP23434 173 aa12.13□□□□□ -0.47
SMN2-202ENST00000380742 CKS1BP61024 79 aa12.13□□□□□ -0.47
SMN2-202ENST00000380742 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
SMN2-202ENST00000380742 STPG4Q8N801 248 aa12.12□□□□□ -0.47
SMN2-202ENST00000380742 HERVK_113P61574 105 aa12.11□□□□□ -0.47
SMN2-202ENST00000380742 C6orf48Q9UBA6 75 aa12.11□□□□□ -0.47
SMN2-202ENST00000380742 LEPROTO15243 131 aa12.1□□□□□ -0.47
SMN2-202ENST00000380742 CXCL5P42830 114 aa12.1□□□□□ -0.47
SMN2-202ENST00000380742 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
SMN2-202ENST00000380742 SCGB1D1O95968 90 aa12.09□□□□□ -0.47
SMN2-202ENST00000380742 AKR1D1P51857 326 aa12.09□□□□□ -0.47
SMN2-202ENST00000380742 TSPEAR-AS2P59090 65 aa12.09□□□□□ -0.47
SMN2-202ENST00000380742 RNF151Q2KHN1 245 aa12.09□□□□□ -0.47
SMN2-202ENST00000380742 E9PLD3 99 aa12.08□□□□□ -0.48
SMN2-202ENST00000380742 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
SMN2-202ENST00000380742 TRBV30A0A0K0K1B3 111 aa12.07□□□□□ -0.48
SMN2-202ENST00000380742 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
SMN2-202ENST00000380742 PLEKHB2Q96CS7 222 aa12.07□□□□□ -0.48
SMN2-202ENST00000380742 ZNF625Q96I27 306 aaPredicted RBP12.07□□□□□ -0.48
SMN2-202ENST00000380742 J3QQQ9 107 aa12.06□□□□□ -0.48
SMN2-202ENST00000380742 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
SMN2-202ENST00000380742 MAJINQ3KP22 176 aa12.05□□□□□ -0.48
SMN2-202ENST00000380742 ANKRD39Q53RE8 183 aa12.05□□□□□ -0.48
SMN2-202ENST00000380742 JOSD1Q15040 202 aaPredicted RBP12.05□□□□□ -0.48
SMN2-202ENST00000380742 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
SMN2-202ENST00000380742 APOBP04114 4563 aaKnown RBP12.03□□□□□ -0.48
SMN2-202ENST00000380742 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
SMN2-202ENST00000380742 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
SMN2-202ENST00000380742 FAM30AQ9NZY2 134 aa12.03□□□□□ -0.48
SMN2-202ENST00000380742 A0A096LNI7 61 aa12.02□□□□□ -0.49
SMN2-202ENST00000380742 TLX1NBP0CAT3 122 aa12.02□□□□□ -0.49
SMN2-202ENST00000380742 SFTA2Q6UW10 78 aa12.02□□□□□ -0.49
SMN2-202ENST00000380742 PANO1I0J062 215 aa12.01□□□□□ -0.49
SMN2-202ENST00000380742 CHTF8P0CG12 524 aa12.01□□□□□ -0.49
SMN2-202ENST00000380742 Q6ZRP5 223 aa12.01□□□□□ -0.49
SMN2-202ENST00000380742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
SMN2-202ENST00000380742 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
SMN2-202ENST00000380742 NDUFC2-KCTD14E9PQ53 114 aa12□□□□□ -0.49
SMN2-202ENST00000380742 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
SMN2-202ENST00000380742 GAGE2BQ13066 116 aa12□□□□□ -0.49
SMN2-202ENST00000380742 PYY3Q5JQD4 70 aa12□□□□□ -0.49
SMN2-202ENST00000380742 Q6ZSA8 131 aa12□□□□□ -0.49
SMN2-202ENST00000380742 IGKV2-24A0A0C4DH68 120 aa11.99□□□□□ -0.49
SMN2-202ENST00000380742 NMUP48645 174 aa11.99□□□□□ -0.49
SMN2-202ENST00000380742 TTTY13Q9BZ97 58 aa11.99□□□□□ -0.49
SMN2-202ENST00000380742 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
SMN2-202ENST00000380742 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
SMN2-202ENST00000380742 PFN2P35080 140 aa11.98□□□□□ -0.49
SMN2-202ENST00000380742 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
SMN2-202ENST00000380742 HERV-K104P63124 156 aa11.98□□□□□ -0.49
SMN2-202ENST00000380742 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
SMN2-202ENST00000380742 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
SMN2-202ENST00000380742 BIRC6Q9NR09 4857 aa11.96□□□□□ -0.49
SMN2-202ENST00000380742 GAGE2EQ4V326 116 aa11.96□□□□□ -0.49
SMN2-202ENST00000380742 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.49
SMN2-202ENST00000380742 GAGE2DQ9UEU5 116 aa11.96□□□□□ -0.49
SMN2-202ENST00000380742 ZNF815PA8K554 130 aa11.94□□□□□ -0.5
SMN2-202ENST00000380742 COX17Q14061 63 aa11.94□□□□□ -0.5
SMN2-202ENST00000380742 MEIG1Q5JSS6 88 aa11.94□□□□□ -0.5
SMN2-202ENST00000380742 PCP2Q8IVA1 136 aa11.94□□□□□ -0.5
SMN2-202ENST00000380742 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
SMN2-202ENST00000380742 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
SMN2-202ENST00000380742 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
SMN2-202ENST00000380742 HAMPP81172 84 aa11.93□□□□□ -0.5
SMN2-202ENST00000380742 LOC105371267A0A1B0GV96 52 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 XGP55808 180 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 LINC00158P58513 81 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
SMN2-202ENST00000380742 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 DPH3Q96FX2 82 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 VAMP8Q9BV40 100 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 XAGE1AQ9HD64 81 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 PAM16Q9Y3D7 125 aa11.92□□□□□ -0.5
SMN2-202ENST00000380742 SCXQ7RTU7 201 aa11.91□□□□□ -0.5
SMN2-202ENST00000380742 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
SMN2-202ENST00000380742 RYR1P21817 5038 aa11.91□□□□□ -0.5
SMN2-202ENST00000380742 KIAA1109Q2LD37 5005 aa11.91□□□□□ -0.5
SMN2-202ENST00000380742 A0A087WYN8 130 aa11.9□□□□□ -0.5
SMN2-202ENST00000380742 LINC00587B1AMM8 73 aa11.9□□□□□ -0.5
SMN2-202ENST00000380742 CDK2AP2O75956 126 aa11.89□□□□□ -0.51
SMN2-202ENST00000380742 SPATA45Q537H7 98 aa11.89□□□□□ -0.51
SMN2-202ENST00000380742 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
SMN2-202ENST00000380742 HSPG2P98160 4391 aa11.88□□□□□ -0.51
SMN2-202ENST00000380742 A0A1W2PNN7 141 aa11.88□□□□□ -0.51
SMN2-202ENST00000380742 FAM168BA1KXE4 195 aa11.88□□□□□ -0.51
SMN2-202ENST00000380742 MIR7-3HGQ8N6C7 128 aa11.88□□□□□ -0.51
SMN2-202ENST00000380742 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
SMN2-202ENST00000380742 DAND5Q8N907 189 aa11.87□□□□□ -0.51
SMN2-202ENST00000380742 LITAFQ99732 161 aa11.87□□□□□ -0.51
SMN2-202ENST00000380742 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
SMN2-202ENST00000380742 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
SMN2-202ENST00000380742 TP73-AS1Q9UF72 201 aa11.86□□□□□ -0.51
SMN2-202ENST00000380742 COX8AP10176 69 aa11.85□□□□□ -0.51
SMN2-202ENST00000380742 SCGB1D4Q6XE38 83 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms