RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 SMIM1B2RUZ4 78 aa14.5□□□□□ -0.09
RPP38-201ENST00000378197 C6orf226Q5I0X4 101 aa14.5□□□□□ -0.09
RPP38-201ENST00000378197 BAGE3Q86Y29 109 aa14.5□□□□□ -0.09
RPP38-201ENST00000378197 TRBV30A0A0K0K1B3 111 aa14.5□□□□□ -0.09
RPP38-201ENST00000378197 FLG2Q5D862 2391 aaPredicted RBP14.49□□□□□ -0.09
RPP38-201ENST00000378197 TLX1NBP0CAT3 122 aa14.49□□□□□ -0.09
RPP38-201ENST00000378197 IGLC3P0DOY3 106 aa14.49□□□□□ -0.09
RPP38-201ENST00000378197 CKS1BP61024 79 aa14.49□□□□□ -0.09
RPP38-201ENST00000378197 C7orf33Q8WU49 177 aa14.49□□□□□ -0.09
RPP38-201ENST00000378197 Q6ZRP5 223 aa14.48□□□□□ -0.09
RPP38-201ENST00000378197 HSBP1O75506 76 aa14.47□□□□□ -0.09
RPP38-201ENST00000378197 A0A1W2PNN7 141 aa14.46□□□□□ -0.09
RPP38-201ENST00000378197 SPINK8P0C7L1 97 aa14.46□□□□□ -0.09
RPP38-201ENST00000378197 C9orf116Q5BN46 136 aaPredicted RBP14.45□□□□□ -0.1
RPP38-201ENST00000378197 H3BRM9 83 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 FAM19A2Q8N3H0 131 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 MYCBP2O75592 4640 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 ATP6V1G1O75348 118 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 GAGE2EQ4V326 116 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 COX7B2Q8TF08 81 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 IFI27L1Q96BM0 104 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 GAGE2DQ9UEU5 116 aa14.44□□□□□ -0.1
RPP38-201ENST00000378197 NDUFC2-KCTD14E9PQ53 114 aa14.43□□□□□ -0.1
RPP38-201ENST00000378197 F8VRH5 84 aa14.43□□□□□ -0.1
RPP38-201ENST00000378197 CXCL5P42830 114 aa14.43□□□□□ -0.1
RPP38-201ENST00000378197 SERF1AO75920 110 aa14.42□□□□□ -0.1
RPP38-201ENST00000378197 ZNF22P17026 224 aaPredicted RBP14.42□□□□□ -0.1
RPP38-201ENST00000378197 HNRNPA3P51991 378 aaKnown RBP14.42□□□□□ -0.1
RPP38-201ENST00000378197 LINC00310P59036 64 aa14.42□□□□□ -0.1
RPP38-201ENST00000378197 CHTOPQ9Y3Y2 248 aaKnown RBP14.4□□□□□ -0.1
RPP38-201ENST00000378197 C11orf86A6NJI1 115 aa14.39□□□□□ -0.11
RPP38-201ENST00000378197 S100A1P23297 94 aa14.39□□□□□ -0.11
RPP38-201ENST00000378197 TRAV12-1A0A0B4J245 112 aa14.38□□□□□ -0.11
RPP38-201ENST00000378197 FAM168BA1KXE4 195 aa14.38□□□□□ -0.11
RPP38-201ENST00000378197 IGLV5-39A0A0G2JS06 123 aa14.37□□□□□ -0.11
RPP38-201ENST00000378197 NUPR1O60356 82 aa14.37□□□□□ -0.11
RPP38-201ENST00000378197 PRR3P79522 188 aaKnown RBP14.37□□□□□ -0.11
RPP38-201ENST00000378197 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
RPP38-201ENST00000378197 C9orf129Q5T035 196 aaKnown RBP14.35□□□□□ -0.11
RPP38-201ENST00000378197 PHF5AQ7RTV0 110 aaKnown RBP14.35□□□□□ -0.11
RPP38-201ENST00000378197 FAM19A5Q7Z5A7 132 aaPredicted RBP14.35□□□□□ -0.11
RPP38-201ENST00000378197 LEPROTL1O95214 131 aa14.34□□□□□ -0.11
RPP38-201ENST00000378197 KRTAP7-1Q8IUC3 87 aa14.32□□□□□ -0.12
RPP38-201ENST00000378197 XAGE1AQ9HD64 81 aa14.31□□□□□ -0.12
RPP38-201ENST00000378197 PKHD1L1Q86WI1 4243 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 KRTAP29-1A8MX34 341 aaPredicted RBP14.3□□□□□ -0.12
RPP38-201ENST00000378197 H0Y8G0 127 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BKO60814 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BJP06899 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BOP23527 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BBP33778 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BDP58876 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BCP62807 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST2H2BEQ16778 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BHQ93079 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BNQ99877 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 HIST1H2BMQ99879 126 aa14.3□□□□□ -0.12
RPP38-201ENST00000378197 FABP4P15090 132 aa14.29□□□□□ -0.12
RPP38-201ENST00000378197 HSPB8Q9UJY1 196 aa14.29□□□□□ -0.12
RPP38-201ENST00000378197 DMBT1Q9UGM3 2413 aaPredicted RBP14.28□□□□□ -0.12
RPP38-201ENST00000378197 M0QXV9 152 aa14.28□□□□□ -0.12
RPP38-201ENST00000378197 ODF1Q14990 250 aa14.28□□□□□ -0.12
RPP38-201ENST00000378197 LRP1Q07954 4544 aaKnown RBP14.27□□□□□ -0.12
RPP38-201ENST00000378197 TMEM223A0PJW6 202 aa14.27□□□□□ -0.12
RPP38-201ENST00000378197 J3QL48 77 aa14.27□□□□□ -0.12
RPP38-201ENST00000378197 PSORS1C2Q9UIG4 136 aa14.26□□□□□ -0.13
RPP38-201ENST00000378197 OXTP01178 125 aa14.25□□□□□ -0.13
RPP38-201ENST00000378197 SERTAD4-AS1Q5TG53 156 aa14.25□□□□□ -0.13
RPP38-201ENST00000378197 FAT3Q8TDW7 4589 aa14.23□□□□□ -0.13
RPP38-201ENST00000378197 KRTAP11-1Q8IUC1 163 aa14.23□□□□□ -0.13
RPP38-201ENST00000378197 PFN2P35080 140 aa14.22□□□□□ -0.13
RPP38-201ENST00000378197 ZNF625Q96I27 306 aaPredicted RBP14.22□□□□□ -0.13
RPP38-201ENST00000378197 SFTA2Q6UW10 78 aa14.21□□□□□ -0.13
RPP38-201ENST00000378197 ERG28Q9UKR5 140 aa14.21□□□□□ -0.13
RPP38-201ENST00000378197 UBE2BP63146 152 aa14.2□□□□□ -0.14
RPP38-201ENST00000378197 C1orf137Q5JT78 98 aa14.2□□□□□ -0.14
RPP38-201ENST00000378197 C22orf24Q9Y442 160 aa14.2□□□□□ -0.14
RPP38-201ENST00000378197 HERC1Q15751 4861 aa14.19□□□□□ -0.14
RPP38-201ENST00000378197 PLNP26678 52 aa14.18□□□□□ -0.14
RPP38-201ENST00000378197 SRSF9Q13242 221 aaKnown RBP eCLIP14.18□□□□□ -0.14
RPP38-201ENST00000378197 SPINK6Q6UWN8 80 aa14.18□□□□□ -0.14
RPP38-201ENST00000378197 PMCHL2Q9BQD1 86 aa14.18□□□□□ -0.14
RPP38-201ENST00000378197 MAP1LC3CQ9BXW4 147 aa14.18□□□□□ -0.14
RPP38-201ENST00000378197 DPM2O94777 84 aa14.16□□□□□ -0.14
RPP38-201ENST00000378197 COX17Q14061 63 aa14.16□□□□□ -0.14
RPP38-201ENST00000378197 PLA2G2DQ9UNK4 145 aa14.16□□□□□ -0.14
RPP38-201ENST00000378197 LBHQ53QV2 105 aaPredicted RBP14.14□□□□□ -0.15
RPP38-201ENST00000378197 TP73-AS1Q9UF72 201 aa14.14□□□□□ -0.15
RPP38-201ENST00000378197 IGKCP01834 107 aa14.13□□□□□ -0.15
RPP38-201ENST00000378197 MRPL55Q7Z7F7 128 aaKnown RBP14.13□□□□□ -0.15
RPP38-201ENST00000378197 SND1-IT1Q9HBX3 110 aa14.13□□□□□ -0.15
RPP38-201ENST00000378197 IGLV7-43P04211 117 aa14.12□□□□□ -0.15
RPP38-201ENST00000378197 COA6Q5JTJ3 125 aaKnown RBP14.12□□□□□ -0.15
RPP38-201ENST00000378197 SYS1-DBNDD2H3BUS1 97 aa14.11□□□□□ -0.15
RPP38-201ENST00000378197 IGLV5-37A0A075B6J1 123 aa14.1□□□□□ -0.15
RPP38-201ENST00000378197 LEPROTO15243 131 aa14.1□□□□□ -0.15
RPP38-201ENST00000378197 LINC00158P58513 81 aa14.1□□□□□ -0.15
RPP38-201ENST00000378197 NDUFA12Q9UI09 145 aa14.1□□□□□ -0.15
RPP38-201ENST00000378197 A0A0U1RRA0 63 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms