RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
PCDHA4-201ENST00000378125 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
PCDHA4-201ENST00000378125 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
PCDHA4-201ENST00000378125 WIPF1O43516 503 aa13.22□□□□□ -0.29
PCDHA4-201ENST00000378125 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
PCDHA4-201ENST00000378125 ANK2Q01484 3957 aa13.21□□□□□ -0.29
PCDHA4-201ENST00000378125 LST1O00453 97 aa13.21□□□□□ -0.3
PCDHA4-201ENST00000378125 REG3AQ06141 175 aa13.21□□□□□ -0.3
PCDHA4-201ENST00000378125 SIGMAR1Q99720 223 aa13.21□□□□□ -0.3
PCDHA4-201ENST00000378125 SPATA25Q9BR10 227 aa13.21□□□□□ -0.3
PCDHA4-201ENST00000378125 TEX49A0A1B0GTD5 131 aa13.2□□□□□ -0.3
PCDHA4-201ENST00000378125 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
PCDHA4-201ENST00000378125 CCL18P55774 89 aa13.19□□□□□ -0.3
PCDHA4-201ENST00000378125 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
PCDHA4-201ENST00000378125 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
PCDHA4-201ENST00000378125 IGKV2-28A0A075B6P5 120 aa13.18□□□□□ -0.3
PCDHA4-201ENST00000378125 IGKV2D-28P01615 120 aa13.18□□□□□ -0.3
PCDHA4-201ENST00000378125 SHISA2Q6UWI4 295 aa13.18□□□□□ -0.3
PCDHA4-201ENST00000378125 IBA57-AS1B1ANH7 110 aa13.17□□□□□ -0.3
PCDHA4-201ENST00000378125 C3orf56Q8N813 242 aa13.17□□□□□ -0.3
PCDHA4-201ENST00000378125 CDIP1Q9H305 208 aa13.17□□□□□ -0.3
PCDHA4-201ENST00000378125 CRPP02741 224 aa13.16□□□□□ -0.3
PCDHA4-201ENST00000378125 COX7A2LO14548 114 aa13.16□□□□□ -0.3
PCDHA4-201ENST00000378125 MALP21145 153 aa13.15□□□□□ -0.3
PCDHA4-201ENST00000378125 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
PCDHA4-201ENST00000378125 MAST4O15021 2626 aa13.15□□□□□ -0.3
PCDHA4-201ENST00000378125 CKS1BP61024 79 aa13.14□□□□□ -0.31
PCDHA4-201ENST00000378125 Q8IZM0 81 aa13.14□□□□□ -0.31
PCDHA4-201ENST00000378125 KLK12Q9UKR0 248 aa13.14□□□□□ -0.31
PCDHA4-201ENST00000378125 M0QXV9 152 aa13.13□□□□□ -0.31
PCDHA4-201ENST00000378125 TRAV13-2A0A0B4J235 113 aa13.13□□□□□ -0.31
PCDHA4-201ENST00000378125 LELP1Q5T871 98 aa13.13□□□□□ -0.31
PCDHA4-201ENST00000378125 FAM218AQ96MZ4 157 aa13.13□□□□□ -0.31
PCDHA4-201ENST00000378125 CMYA5Q8N3K9 4069 aa13.13□□□□□ -0.31
PCDHA4-201ENST00000378125 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-201ENST00000378125 UBE2WQ96B02 151 aa13.12□□□□□ -0.31
PCDHA4-201ENST00000378125 LINC00526Q96FQ7 95 aa13.12□□□□□ -0.31
PCDHA4-201ENST00000378125 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
PCDHA4-201ENST00000378125 CFAP161Q6P656 301 aa13.11□□□□□ -0.31
PCDHA4-201ENST00000378125 TENM3Q9P273 2699 aa13.11□□□□□ -0.31
PCDHA4-201ENST00000378125 OR13C6PQ8NH95 151 aa13.11□□□□□ -0.31
PCDHA4-201ENST00000378125 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
PCDHA4-201ENST00000378125 Q6ZTC4 211 aa13.1□□□□□ -0.31
PCDHA4-201ENST00000378125 H3BT86 120 aa13.1□□□□□ -0.31
PCDHA4-201ENST00000378125 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
PCDHA4-201ENST00000378125 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
PCDHA4-201ENST00000378125 SMIM11BQ8TCY0 68 aa13.09□□□□□ -0.31
PCDHA4-201ENST00000378125 MT-ATP8P03928 68 aa13.08□□□□□ -0.31
PCDHA4-201ENST00000378125 XGP55808 180 aa13.08□□□□□ -0.31
PCDHA4-201ENST00000378125 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
PCDHA4-201ENST00000378125 PPDPFQ9H3Y8 114 aa13.08□□□□□ -0.32
PCDHA4-201ENST00000378125 Q9HAA7 133 aa13.07□□□□□ -0.32
PCDHA4-201ENST00000378125 RPL28P46779 137 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-201ENST00000378125 KPRPQ5T749 579 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-201ENST00000378125 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
PCDHA4-201ENST00000378125 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
PCDHA4-201ENST00000378125 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
PCDHA4-201ENST00000378125 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-201ENST00000378125 EGFEM1PQ0D2K5 195 aa13.05□□□□□ -0.32
PCDHA4-201ENST00000378125 WFDC10BQ8IUB3 73 aa13.05□□□□□ -0.32
PCDHA4-201ENST00000378125 LINC01561Q8N1V8 128 aa13.05□□□□□ -0.32
PCDHA4-201ENST00000378125 C10orf25Q5T742 122 aa13.05□□□□□ -0.32
PCDHA4-201ENST00000378125 A0A0J9YWU9 116 aa13.04□□□□□ -0.32
PCDHA4-201ENST00000378125 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-201ENST00000378125 UNQ6190/PRO20217Q6UXQ8 127 aa13.03□□□□□ -0.32
PCDHA4-201ENST00000378125 A0A087WYN8 130 aa13.02□□□□□ -0.32
PCDHA4-201ENST00000378125 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.32
PCDHA4-201ENST00000378125 SPAG11BQ08648 103 aa13.02□□□□□ -0.32
PCDHA4-201ENST00000378125 COL6A5A8TX70 2615 aa13.01□□□□□ -0.33
PCDHA4-201ENST00000378125 BAALC-AS2P0C853 105 aa13.01□□□□□ -0.33
PCDHA4-201ENST00000378125 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
PCDHA4-201ENST00000378125 TRACP01848 142 aa13.01□□□□□ -0.33
PCDHA4-201ENST00000378125 SVIPQ8NHG7 77 aa13□□□□□ -0.33
PCDHA4-201ENST00000378125 CXCL5P42830 114 aa12.99□□□□□ -0.33
PCDHA4-201ENST00000378125 Q8NDZ9 215 aa12.98□□□□□ -0.33
PCDHA4-201ENST00000378125 KLK5Q9Y337 293 aaPredicted RBP12.97□□□□□ -0.33
PCDHA4-201ENST00000378125 NCR3O14931 201 aa12.97□□□□□ -0.33
PCDHA4-201ENST00000378125 ESRGQ1W209 222 aa12.97□□□□□ -0.33
PCDHA4-201ENST00000378125 COX17Q14061 63 aa12.96□□□□□ -0.34
PCDHA4-201ENST00000378125 C22orf24Q9Y442 160 aa12.96□□□□□ -0.34
PCDHA4-201ENST00000378125 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
PCDHA4-201ENST00000378125 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
PCDHA4-201ENST00000378125 LECT2O14960 151 aa12.95□□□□□ -0.34
PCDHA4-201ENST00000378125 BAHCC1Q9P281 2608 aa12.95□□□□□ -0.34
PCDHA4-201ENST00000378125 DNAL4O96015 105 aa12.94□□□□□ -0.34
PCDHA4-201ENST00000378125 SLPIP03973 132 aa12.94□□□□□ -0.34
PCDHA4-201ENST00000378125 SCGB1A1P11684 91 aa12.94□□□□□ -0.34
PCDHA4-201ENST00000378125 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
PCDHA4-201ENST00000378125 C15orf53Q8NAA6 179 aa12.93□□□□□ -0.34
PCDHA4-201ENST00000378125 MRAPQ8TCY5 172 aa12.93□□□□□ -0.34
PCDHA4-201ENST00000378125 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
PCDHA4-201ENST00000378125 H0YGX0 51 aa12.92□□□□□ -0.34
PCDHA4-201ENST00000378125 H3BNG1 76 aa12.92□□□□□ -0.34
PCDHA4-201ENST00000378125 DEFB121Q5J5C9 76 aa12.91□□□□□ -0.34
PCDHA4-201ENST00000378125 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
PCDHA4-201ENST00000378125 A0A1B0GV72 72 aa12.9□□□□□ -0.34
PCDHA4-201ENST00000378125 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
PCDHA4-201ENST00000378125 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
PCDHA4-201ENST00000378125 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
PCDHA4-201ENST00000378125 SNCGO76070 127 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms