RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
VRK3-202ENST00000377011 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
VRK3-202ENST00000377011 TRIAP1O43715 76 aa8.62□□□□□ -1.03
VRK3-202ENST00000377011 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
VRK3-202ENST00000377011 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
VRK3-202ENST00000377011 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
VRK3-202ENST00000377011 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 H7C2G1 150 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 H7C423 109 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 LY6G6CO95867 125 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
VRK3-202ENST00000377011 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 APLNQ9ULZ1 77 aa8.61□□□□□ -1.03
VRK3-202ENST00000377011 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 SMIM9A6NGZ8 99 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 Q6Q795 121 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
VRK3-202ENST00000377011 FAT2Q9NYQ8 4349 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
VRK3-202ENST00000377011 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
VRK3-202ENST00000377011 SNCGO76070 127 aa8.59□□□□□ -1.03
VRK3-202ENST00000377011 HERV-K104P63124 156 aa8.59□□□□□ -1.03
VRK3-202ENST00000377011 KLK5Q9Y337 293 aaPredicted RBP8.59□□□□□ -1.03
VRK3-202ENST00000377011 TRAV10A0A0B4J240 114 aa8.58□□□□□ -1.04
VRK3-202ENST00000377011 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
VRK3-202ENST00000377011 LST1O00453 97 aa8.58□□□□□ -1.04
VRK3-202ENST00000377011 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
VRK3-202ENST00000377011 C2orf82Q6UX34 121 aa8.58□□□□□ -1.04
VRK3-202ENST00000377011 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 HTN3P15516 51 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 Q6ZTI0 123 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
VRK3-202ENST00000377011 COX6A2Q02221 97 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 TMEM243Q9BU79 118 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 Q9H8V8 135 aa8.56□□□□□ -1.04
VRK3-202ENST00000377011 NOP10Q9NPE3 64 aaKnown RBP8.56□□□□□ -1.04
VRK3-202ENST00000377011 TRAV26-1A0A087WT03 109 aa8.55□□□□□ -1.04
VRK3-202ENST00000377011 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
VRK3-202ENST00000377011 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
VRK3-202ENST00000377011 F5H768 121 aa8.54□□□□□ -1.04
VRK3-202ENST00000377011 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
VRK3-202ENST00000377011 UBE2L6O14933 153 aa8.54□□□□□ -1.04
VRK3-202ENST00000377011 DAD1P61803 113 aa8.54□□□□□ -1.04
VRK3-202ENST00000377011 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
VRK3-202ENST00000377011 GAGE4Q13068 117 aa8.53□□□□□ -1.04
VRK3-202ENST00000377011 GAGE5Q13069 117 aa8.53□□□□□ -1.04
VRK3-202ENST00000377011 ACYP1P07311 99 aa8.52□□□□□ -1.05
VRK3-202ENST00000377011 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
VRK3-202ENST00000377011 HECTD4Q9Y4D8 3996 aa8.52□□□□□ -1.05
VRK3-202ENST00000377011 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 COX7A2LO14548 114 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 GAGE6Q13070 117 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 LINC00612Q8N6U2 182 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 PKD1P98161 4303 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 TRGV2A0A075B6R0 118 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 GAGE7O76087 117 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
VRK3-202ENST00000377011 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
VRK3-202ENST00000377011 NPC2P61916 151 aa8.5□□□□□ -1.05
VRK3-202ENST00000377011 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
VRK3-202ENST00000377011 TRACP01848 142 aa8.49□□□□□ -1.05
VRK3-202ENST00000377011 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
VRK3-202ENST00000377011 DAND5Q8N907 189 aa8.49□□□□□ -1.05
VRK3-202ENST00000377011 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
VRK3-202ENST00000377011 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
VRK3-202ENST00000377011 SOSTDC1Q6X4U4 206 aa8.48□□□□□ -1.05
VRK3-202ENST00000377011 TRBV6-8A0A0A6YYG3 113 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 TRAV13-2A0A0B4J235 113 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 FHL2Q14192 279 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 IMUPQ9GZP8 106 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 PKHD1P08F94 4074 aa8.47□□□□□ -1.05
VRK3-202ENST00000377011 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.05
VRK3-202ENST00000377011 ATP5G1P05496 136 aa8.46□□□□□ -1.05
VRK3-202ENST00000377011 M0R2N4 97 aa8.45□□□□□ -1.06
VRK3-202ENST00000377011 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
VRK3-202ENST00000377011 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
VRK3-202ENST00000377011 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
VRK3-202ENST00000377011 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
VRK3-202ENST00000377011 A0A087WZ39 114 aa8.43□□□□□ -1.06
VRK3-202ENST00000377011 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
VRK3-202ENST00000377011 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms