RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 ZNF815PA8K554 130 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 DLEU1O43261 78 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 KRTAP10-2P60368 255 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 UQCR10Q9UDW1 63 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 FRAS1Q86XX4 4008 aa11.12□□□□□ -0.63
HLA-F-218ENST00000376861 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
HLA-F-218ENST00000376861 SPAG11BQ08648 103 aa11.11□□□□□ -0.63
HLA-F-218ENST00000376861 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
HLA-F-218ENST00000376861 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
HLA-F-218ENST00000376861 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
HLA-F-218ENST00000376861 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
HLA-F-218ENST00000376861 FUSP35637 526 aaKnown RBP eCLIP11.1□□□□□ -0.63
HLA-F-218ENST00000376861 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
HLA-F-218ENST00000376861 NDUFA1O15239 70 aa11.09□□□□□ -0.63
HLA-F-218ENST00000376861 CXCL5P42830 114 aa11.09□□□□□ -0.63
HLA-F-218ENST00000376861 C15orf56Q8N910 161 aa11.09□□□□□ -0.63
HLA-F-218ENST00000376861 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
HLA-F-218ENST00000376861 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
HLA-F-218ENST00000376861 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
HLA-F-218ENST00000376861 GVQW2A0A096LPI5 108 aaPredicted RBP11.08□□□□□ -0.64
HLA-F-218ENST00000376861 CKS1BP61024 79 aa11.08□□□□□ -0.64
HLA-F-218ENST00000376861 GCSHP23434 173 aa11.07□□□□□ -0.64
HLA-F-218ENST00000376861 HERV-K104P63124 156 aa11.07□□□□□ -0.64
HLA-F-218ENST00000376861 ZNF625Q96I27 306 aaPredicted RBP11.07□□□□□ -0.64
HLA-F-218ENST00000376861 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
HLA-F-218ENST00000376861 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
HLA-F-218ENST00000376861 F8WDY8 70 aa11.04□□□□□ -0.64
HLA-F-218ENST00000376861 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
HLA-F-218ENST00000376861 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
HLA-F-218ENST00000376861 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
HLA-F-218ENST00000376861 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
HLA-F-218ENST00000376861 CAMK2N2Q96S95 79 aa11.04□□□□□ -0.64
HLA-F-218ENST00000376861 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
HLA-F-218ENST00000376861 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
HLA-F-218ENST00000376861 SYCNQ0VAF6 134 aa11.02□□□□□ -0.65
HLA-F-218ENST00000376861 C2orf82Q6UX34 121 aa11.02□□□□□ -0.65
HLA-F-218ENST00000376861 CARD19Q96LW7 228 aa11.02□□□□□ -0.65
HLA-F-218ENST00000376861 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
HLA-F-218ENST00000376861 LINC00587B1AMM8 73 aa11.01□□□□□ -0.65
HLA-F-218ENST00000376861 CIRBPQ14011 172 aaKnown RBP11.01□□□□□ -0.65
HLA-F-218ENST00000376861 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
HLA-F-218ENST00000376861 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 TIMM17BO60830 172 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 DDTP30046 118 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 LINC01620Q4KN68 170 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 C9orf163Q8N9P6 203 aa11□□□□□ -0.65
HLA-F-218ENST00000376861 UNQ6190/PRO20217Q6UXQ8 127 aa10.99□□□□□ -0.65
HLA-F-218ENST00000376861 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
HLA-F-218ENST00000376861 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
HLA-F-218ENST00000376861 TRBV30A0A0K0K1B3 111 aa10.98□□□□□ -0.65
HLA-F-218ENST00000376861 PCP4L1A6NKN8 68 aa10.98□□□□□ -0.65
HLA-F-218ENST00000376861 SLPIP03973 132 aa10.98□□□□□ -0.65
HLA-F-218ENST00000376861 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
HLA-F-218ENST00000376861 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
HLA-F-218ENST00000376861 KRTAP10-1P60331 282 aa10.96□□□□□ -0.65
HLA-F-218ENST00000376861 COX17Q14061 63 aa10.96□□□□□ -0.65
HLA-F-218ENST00000376861 Q6ZRU5 148 aa10.96□□□□□ -0.65
HLA-F-218ENST00000376861 DPH3Q96FX2 82 aa10.96□□□□□ -0.65
HLA-F-218ENST00000376861 SPANXB1Q9NS25 103 aaPredicted RBP10.96□□□□□ -0.65
HLA-F-218ENST00000376861 PKD1P98161 4303 aa10.96□□□□□ -0.66
HLA-F-218ENST00000376861 SMIM13P0DJ93 91 aa10.95□□□□□ -0.66
HLA-F-218ENST00000376861 C6orf48Q9UBA6 75 aa10.95□□□□□ -0.66
HLA-F-218ENST00000376861 LINC00158P58513 81 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
HLA-F-218ENST00000376861 Q6ZVH6 145 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 HIST1H4GQ99525 98 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 LITAFQ99732 161 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 PFN2P35080 140 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 CTAG1AP78358 180 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 HSD52Q0P140 79 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 TAL2Q16559 108 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 RNF151Q2KHN1 245 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
HLA-F-218ENST00000376861 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
HLA-F-218ENST00000376861 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
HLA-F-218ENST00000376861 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
HLA-F-218ENST00000376861 HECTD4Q9Y4D8 3996 aa10.91□□□□□ -0.66
HLA-F-218ENST00000376861 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
HLA-F-218ENST00000376861 COPS9Q8WXC6 57 aa10.91□□□□□ -0.66
HLA-F-218ENST00000376861 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
HLA-F-218ENST00000376861 SDIM1Q6ZPB5 146 aa10.9□□□□□ -0.66
HLA-F-218ENST00000376861 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
HLA-F-218ENST00000376861 IGKV2-24A0A0C4DH68 120 aa10.89□□□□□ -0.67
HLA-F-218ENST00000376861 IFITM1P13164 125 aa10.89□□□□□ -0.67
HLA-F-218ENST00000376861 DAND5Q8N907 189 aa10.89□□□□□ -0.67
HLA-F-218ENST00000376861 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
HLA-F-218ENST00000376861 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
HLA-F-218ENST00000376861 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
HLA-F-218ENST00000376861 M0R143 59 aa10.88□□□□□ -0.67
HLA-F-218ENST00000376861 CEND1Q8N111 149 aa10.88□□□□□ -0.67
HLA-F-218ENST00000376861 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
HLA-F-218ENST00000376861 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
HLA-F-218ENST00000376861 PTTG1IPP53801 180 aa10.87□□□□□ -0.67
HLA-F-218ENST00000376861 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
HLA-F-218ENST00000376861 FAM30AQ9NZY2 134 aa10.87□□□□□ -0.67
HLA-F-218ENST00000376861 MUSTN1Q8IVN3 82 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms