RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FHL2Q14192 279 aa8.23□□□□□ -1.09
PTCH1-203ENST00000375274 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
PTCH1-203ENST00000375274 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-203ENST00000375274 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
PTCH1-203ENST00000375274 KLK5Q9Y337 293 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-203ENST00000375274 DHRS4-AS1Q9P1J3 65 aa8.22□□□□□ -1.09
PTCH1-203ENST00000375274 EPG5Q9HCE0 2579 aa8.21□□□□□ -1.09
PTCH1-203ENST00000375274 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.09
PTCH1-203ENST00000375274 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.09
PTCH1-203ENST00000375274 TRBV10-3A0A0K0K1G6 114 aa8.21□□□□□ -1.1
PTCH1-203ENST00000375274 A0A0C4DFX4 3053 aa8.21□□□□□ -1.1
PTCH1-203ENST00000375274 COL4A2P08572 1712 aa8.21□□□□□ -1.1
PTCH1-203ENST00000375274 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 WFDC10BQ8IUB3 73 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 CHD7Q9P2D1 2997 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 IGKV4-1P06312 121 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 LINC00846Q9NV44 126 aa8.2□□□□□ -1.1
PTCH1-203ENST00000375274 EGFEM1PQ0D2K5 195 aa8.19□□□□□ -1.1
PTCH1-203ENST00000375274 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-203ENST00000375274 TRBV7-7A0A0K0K1E9 115 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 RPL37AP8A6NKH3 93 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 LY6G6DO95868 133 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 WFDC13Q8IUB5 93 aa8.18□□□□□ -1.1
PTCH1-203ENST00000375274 Q8N2B8 174 aa8.17□□□□□ -1.1
PTCH1-203ENST00000375274 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
PTCH1-203ENST00000375274 IGHV4-30-4P0DP06 118 aa8.17□□□□□ -1.1
PTCH1-203ENST00000375274 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
PTCH1-203ENST00000375274 SMIM26A0A096LP01 95 aa8.16□□□□□ -1.1
PTCH1-203ENST00000375274 PRR4Q16378 134 aa8.16□□□□□ -1.1
PTCH1-203ENST00000375274 Q8N3U1 123 aa8.16□□□□□ -1.1
PTCH1-203ENST00000375274 C5orf42Q9H799 3197 aa8.16□□□□□ -1.1
PTCH1-203ENST00000375274 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
PTCH1-203ENST00000375274 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
PTCH1-203ENST00000375274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-203ENST00000375274 CELA1Q9UNI1 258 aa8.15□□□□□ -1.1
PTCH1-203ENST00000375274 Q9UF83 564 aa8.15□□□□□ -1.11
PTCH1-203ENST00000375274 PPDPFQ9H3Y8 114 aa8.14□□□□□ -1.11
PTCH1-203ENST00000375274 PLA2G2AP14555 144 aa8.14□□□□□ -1.11
PTCH1-203ENST00000375274 SBSPONQ8IVN8 264 aa8.14□□□□□ -1.11
PTCH1-203ENST00000375274 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
PTCH1-203ENST00000375274 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
PTCH1-203ENST00000375274 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
PTCH1-203ENST00000375274 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
PTCH1-203ENST00000375274 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
PTCH1-203ENST00000375274 A8MTW9 85 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 LINC00575Q6W349 94 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 C1orf137Q5JT78 98 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
PTCH1-203ENST00000375274 V9GYY9 64 aa8.11□□□□□ -1.11
PTCH1-203ENST00000375274 F8P00451 2351 aa8.11□□□□□ -1.11
PTCH1-203ENST00000375274 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
PTCH1-203ENST00000375274 Q6ZVQ6 151 aa8.11□□□□□ -1.11
PTCH1-203ENST00000375274 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
PTCH1-203ENST00000375274 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
PTCH1-203ENST00000375274 SMR3AQ99954 134 aa8.1□□□□□ -1.11
PTCH1-203ENST00000375274 SVIPQ8NHG7 77 aa8.1□□□□□ -1.11
PTCH1-203ENST00000375274 PCSK5Q92824 1860 aa8.09□□□□□ -1.11
PTCH1-203ENST00000375274 A0A0J9YWU9 116 aa8.09□□□□□ -1.11
PTCH1-203ENST00000375274 KLK9Q2XQG4 91 aa8.08□□□□□ -1.12
PTCH1-203ENST00000375274 FAM218AQ96MZ4 157 aa8.08□□□□□ -1.12
PTCH1-203ENST00000375274 C16orf95Q9H693 158 aa8.08□□□□□ -1.12
PTCH1-203ENST00000375274 RANBP2P49792 3224 aaKnown RBP8.08□□□□□ -1.12
PTCH1-203ENST00000375274 LINC01547P58512 204 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-203ENST00000375274 Q6ZTC4 211 aa8.07□□□□□ -1.12
PTCH1-203ENST00000375274 BPTFQ12830 3046 aa8.07□□□□□ -1.12
PTCH1-203ENST00000375274 USP24Q9UPU5 2620 aa8.07□□□□□ -1.12
PTCH1-203ENST00000375274 IL17DQ8TAD2 202 aa8.07□□□□□ -1.12
PTCH1-203ENST00000375274 RETNQ9HD89 108 aa8.06□□□□□ -1.12
PTCH1-203ENST00000375274 COL27A1Q8IZC6 1860 aaPredicted RBP8.06□□□□□ -1.12
PTCH1-203ENST00000375274 PRYO14603 147 aa8.05□□□□□ -1.12
PTCH1-203ENST00000375274 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
PTCH1-203ENST00000375274 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
PTCH1-203ENST00000375274 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
PTCH1-203ENST00000375274 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
PTCH1-203ENST00000375274 LRCOL1A6NCL2 159 aa8.04□□□□□ -1.12
PTCH1-203ENST00000375274 LYPD5Q6UWN5 251 aa8.04□□□□□ -1.12
PTCH1-203ENST00000375274 CRYGAP11844 174 aa8.04□□□□□ -1.12
PTCH1-203ENST00000375274 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
PTCH1-203ENST00000375274 LITAFQ99732 161 aa8.04□□□□□ -1.12
PTCH1-203ENST00000375274 HTTP42858 3142 aa8.03□□□□□ -1.12
PTCH1-203ENST00000375274 Q8N9L7 120 aa8.03□□□□□ -1.12
PTCH1-203ENST00000375274 Q6ZRU5 148 aa8.03□□□□□ -1.12
PTCH1-203ENST00000375274 A6NED7 52 aa8.03□□□□□ -1.12
PTCH1-203ENST00000375274 SEC61GP60059 68 aa8.03□□□□□ -1.12
PTCH1-203ENST00000375274 CFAP54Q96N23 3096 aa8.02□□□□□ -1.13
PTCH1-203ENST00000375274 LAMA2P24043 3122 aaKnown RBP8.02□□□□□ -1.13
PTCH1-203ENST00000375274 CASC2Q6XLA1 102 aa8.02□□□□□ -1.13
PTCH1-203ENST00000375274 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
PTCH1-203ENST00000375274 FLNBO75369 2602 aaKnown RBP8.02□□□□□ -1.13
PTCH1-203ENST00000375274 CXCL6P80162 114 aa8.01□□□□□ -1.13
PTCH1-203ENST00000375274 CHD9Q3L8U1 2897 aa8.01□□□□□ -1.13
PTCH1-203ENST00000375274 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
PTCH1-203ENST00000375274 IGLV9-49A0A0B4J1Y8 123 aa8.01□□□□□ -1.13
PTCH1-203ENST00000375274 C1orf195Q5TG92 126 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms